RNA–Protein interactions for RNA: ENST00000583085.1

STRADA-222, Transcript of STE20-related kinase adaptor alpha, human

Gene STRADA, Length 3,685 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
STRADA-222	ENST00000583085	TEX101	Q9BY14	249 aa		11.62	□□□□□ -0.55
STRADA-222	ENST00000583085	ZNF717	Q9BY31	904 aa	Predicted RBP	11.62	□□□□□ -0.55
STRADA-222	ENST00000583085	EHD1	Q9H4M9	534 aa		11.62	□□□□□ -0.55
STRADA-222	ENST00000583085	SLC28A3	Q9HAS3	691 aa		11.62	□□□□□ -0.55
STRADA-222	ENST00000583085	SIRT5	Q9NXA8	310 aa		11.62	□□□□□ -0.55
STRADA-222	ENST00000583085	TAAR2	Q9P1P5	351 aa		11.62	□□□□□ -0.55
STRADA-222	ENST00000583085	SCN2A	Q99250	2005 aa		11.61	□□□□□ -0.55
STRADA-222	ENST00000583085	LOC100130705	A0A1B0GUX0	176 aa		11.61	□□□□□ -0.55
STRADA-222	ENST00000583085	RNASET2	O00584	256 aa	Known RBP	11.61	□□□□□ -0.55
STRADA-222	ENST00000583085	RAB39A	Q14964	217 aa		11.61	□□□□□ -0.55
STRADA-222	ENST00000583085	CLCA4	Q14CN2	919 aa		11.61	□□□□□ -0.55
STRADA-222	ENST00000583085	ANXA8L1	Q5VT79	327 aa		11.61	□□□□□ -0.55
STRADA-222	ENST00000583085	LCTL	Q6UWM7	567 aa		11.61	□□□□□ -0.55
STRADA-222	ENST00000583085	CBLL1	Q75N03	491 aa		11.61	□□□□□ -0.55
STRADA-222	ENST00000583085	GPR141	Q7Z602	305 aa		11.61	□□□□□ -0.55
STRADA-222	ENST00000583085	CAMKMT	Q7Z624	323 aa		11.61	□□□□□ -0.55
STRADA-222	ENST00000583085	THAP5	Q7Z6K1	395 aa		11.61	□□□□□ -0.55
STRADA-222	ENST00000583085	C8orf59	Q8N0T1	100 aa	Predicted RBP	11.61	□□□□□ -0.55
STRADA-222	ENST00000583085	RIBC2	Q9H4K1	309 aa		11.61	□□□□□ -0.55
STRADA-222	ENST00000583085	SLAMF7	Q9NQ25	335 aa		11.61	□□□□□ -0.55
STRADA-222	ENST00000583085	TMEM184C	Q9NVA4	438 aa		11.61	□□□□□ -0.55
STRADA-222	ENST00000583085	PTTG2	Q9NZH5	202 aa		11.61	□□□□□ -0.55
STRADA-222	ENST00000583085	RABL2A	Q9UBK7	228 aa	Predicted RBP	11.61	□□□□□ -0.55
STRADA-222	ENST00000583085	ATP6V1H	Q9UI12	483 aa		11.61	□□□□□ -0.55
STRADA-222	ENST00000583085	PNMA8B	Q9ULN7	279 aa	Predicted RBP	11.61	□□□□□ -0.55
STRADA-222	ENST00000583085	KLHL20	Q9Y2M5	609 aa		11.61	□□□□□ -0.55
STRADA-222	ENST00000583085	SEMG1	P04279	462 aa		11.61	□□□□□ -0.55
STRADA-222	ENST00000583085	NAT2	P11245	290 aa		11.61	□□□□□ -0.55
STRADA-222	ENST00000583085	COL9A1	P20849	921 aa		11.61	□□□□□ -0.55
STRADA-222	ENST00000583085	TMEM196	Q5HYL7	178 aa		11.61	□□□□□ -0.55
STRADA-222	ENST00000583085	TMEM26	Q6ZUK4	368 aa		11.61	□□□□□ -0.55
STRADA-222	ENST00000583085	SLC9B2	Q86UD5	537 aa		11.61	□□□□□ -0.55
STRADA-222	ENST00000583085	PJA1	Q8NG27	643 aa		11.61	□□□□□ -0.55
STRADA-222	ENST00000583085	NFKBID	Q8NI38	313 aa		11.61	□□□□□ -0.55
STRADA-222	ENST00000583085	MIEF1	Q9NQG6	463 aa		11.61	□□□□□ -0.55
STRADA-222	ENST00000583085	DZANK1	Q9NVP4	752 aa		11.61	□□□□□ -0.55
STRADA-222	ENST00000583085	PDP1	Q9P0J1	537 aa	Predicted RBP	11.61	□□□□□ -0.55
STRADA-222	ENST00000583085	IGKV1-8	A0A0C4DH67	115 aa		11.61	□□□□□ -0.55
STRADA-222	ENST00000583085	ANKDD1B	A6NHY2	528 aa		11.61	□□□□□ -0.55
STRADA-222	ENST00000583085	HPR	P00739	348 aa		11.61	□□□□□ -0.55
STRADA-222	ENST00000583085	GSS	P48637	474 aa		11.61	□□□□□ -0.55
STRADA-222	ENST00000583085	CLDN2	P57739	230 aa		11.61	□□□□□ -0.55
STRADA-222	ENST00000583085	KCNJ10	P78508	379 aa		11.61	□□□□□ -0.55
STRADA-222	ENST00000583085	RAPSN	Q13702	412 aa		11.61	□□□□□ -0.55
STRADA-222	ENST00000583085	TMEM259	Q4ZIN3	620 aa		11.61	□□□□□ -0.55
STRADA-222	ENST00000583085	GPR107	Q5VW38	600 aa		11.61	□□□□□ -0.55
STRADA-222	ENST00000583085	TSEN54	Q7Z6J9	526 aa	Known RBP	11.61	□□□□□ -0.55
STRADA-222	ENST00000583085	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	11.61	□□□□□ -0.55
STRADA-222	ENST00000583085	CHDH	Q8NE62	594 aa	Predicted RBP	11.61	□□□□□ -0.55
STRADA-222	ENST00000583085	ZNF555	Q8NEP9	628 aa		11.61	□□□□□ -0.55
STRADA-222	ENST00000583085	METTL2A	Q96IZ6	378 aa	Known RBP	11.61	□□□□□ -0.55
STRADA-222	ENST00000583085	DCUN1D5	Q9BTE7	237 aa		11.61	□□□□□ -0.55
STRADA-222	ENST00000583085	BHLHE41	Q9C0J9	482 aa	Predicted RBP	11.61	□□□□□ -0.55
STRADA-222	ENST00000583085	PRDM8	Q9NQV8	689 aa		11.61	□□□□□ -0.55
STRADA-222	ENST00000583085	CLEC1B	Q9P126	229 aa		11.61	□□□□□ -0.55
STRADA-222	ENST00000583085	SAMHD1	Q9Y3Z3	626 aa	Known RBP	11.61	□□□□□ -0.55
STRADA-222	ENST00000583085	GPSM3	Q9Y4H4	160 aa		11.61	□□□□□ -0.55
STRADA-222	ENST00000583085	TBC1D3D	A0A087WVF3	549 aa		11.6	□□□□□ -0.55
STRADA-222	ENST00000583085	TBC1D3I	A0A087WXS9	549 aa		11.6	□□□□□ -0.55
STRADA-222	ENST00000583085	TBC1D3E	A0A087X179	549 aa		11.6	□□□□□ -0.55
STRADA-222	ENST00000583085	TBC1D3K	A0A087X1G2	549 aa		11.6	□□□□□ -0.55
STRADA-222	ENST00000583085	TBC1D3F	A6NER0	549 aa	Predicted RBP	11.6	□□□□□ -0.55
STRADA-222	ENST00000583085	TRIM64C	A6NLI5	447 aa		11.6	□□□□□ -0.55
STRADA-222	ENST00000583085	TBC1D3L	B9A6J9	549 aa		11.6	□□□□□ -0.55
STRADA-222	ENST00000583085	PTGES3L	E9PB15	166 aa		11.6	□□□□□ -0.55
STRADA-222	ENST00000583085		H0Y8X5	98 aa		11.6	□□□□□ -0.55
STRADA-222	ENST00000583085	KMO	O15229	486 aa		11.6	□□□□□ -0.55
STRADA-222	ENST00000583085	OR1F1	O43749	312 aa		11.6	□□□□□ -0.55
STRADA-222	ENST00000583085	PRKRA	O75569	313 aa	Known RBP	11.6	□□□□□ -0.55
STRADA-222	ENST00000583085	TBC1D3H	P0C7X1	549 aa		11.6	□□□□□ -0.55
STRADA-222	ENST00000583085	C5AR1	P21730	350 aa		11.6	□□□□□ -0.55
STRADA-222	ENST00000583085	IGFBP5	P24593	272 aa		11.6	□□□□□ -0.55
STRADA-222	ENST00000583085	PPP2CB	P62714	309 aa		11.6	□□□□□ -0.55
STRADA-222	ENST00000583085	PPP2CA	P67775	309 aa		11.6	□□□□□ -0.55
STRADA-222	ENST00000583085	TFF2	Q03403	129 aa		11.6	□□□□□ -0.55
STRADA-222	ENST00000583085	CYP2A13	Q16696	494 aa		11.6	□□□□□ -0.55
STRADA-222	ENST00000583085	ATAT1	Q5SQI0	421 aa		11.6	□□□□□ -0.55
STRADA-222	ENST00000583085	TBC1D3G	Q6DHY5	549 aa		11.6	□□□□□ -0.55
STRADA-222	ENST00000583085	TBC1D3C	Q6IPX1	549 aa		11.6	□□□□□ -0.55
STRADA-222	ENST00000583085	SHQ1	Q6PI26	577 aa	Known RBP	11.6	□□□□□ -0.55
STRADA-222	ENST00000583085	EIF3M	Q7L2H7	374 aa	Known RBP	11.6	□□□□□ -0.55
STRADA-222	ENST00000583085	HORMAD1	Q86X24	394 aa		11.6	□□□□□ -0.55
STRADA-222	ENST00000583085	ZC3H7A	Q8IWR0	971 aa	Known RBP	11.6	□□□□□ -0.55
STRADA-222	ENST00000583085	TBC1D3	Q8IZP1	549 aa	Predicted RBP	11.6	□□□□□ -0.55
STRADA-222	ENST00000583085	OXR1	Q8N573	874 aa		11.6	□□□□□ -0.55
STRADA-222	ENST00000583085	TMCO5A	Q8N6Q1	288 aa		11.6	□□□□□ -0.55
STRADA-222	ENST00000583085	OR52J3	Q8NH60	311 aa		11.6	□□□□□ -0.55
STRADA-222	ENST00000583085	SETD7	Q8WTS6	366 aa	Known RBP	11.6	□□□□□ -0.55
STRADA-222	ENST00000583085	STARD8	Q92502	1023 aa		11.6	□□□□□ -0.55
STRADA-222	ENST00000583085	UBE2F	Q969M7	185 aa		11.6	□□□□□ -0.55
STRADA-222	ENST00000583085	TRIT1	Q9H3H1	467 aa	Known RBP	11.6	□□□□□ -0.55
STRADA-222	ENST00000583085	LHX9	Q9NQ69	397 aa		11.6	□□□□□ -0.55
STRADA-222	ENST00000583085	USE1	Q9NZ43	259 aa		11.6	□□□□□ -0.55
STRADA-222	ENST00000583085	ARHGEF17	Q96PE2	2063 aa	Predicted RBP	11.6	□□□□□ -0.55
STRADA-222	ENST00000583085	XPNPEP2	O43895	674 aa		11.6	□□□□□ -0.55
STRADA-222	ENST00000583085	FOXD2	O60548	495 aa	Predicted RBP	11.6	□□□□□ -0.55
STRADA-222	ENST00000583085	ADAM23	O75077	832 aa		11.6	□□□□□ -0.55
STRADA-222	ENST00000583085	CEACAM5	P06731	702 aa		11.6	□□□□□ -0.55
STRADA-222	ENST00000583085	PTX3	P26022	381 aa	Predicted RBP	11.6	□□□□□ -0.55
STRADA-222	ENST00000583085	HOXD12	P35452	270 aa		11.6	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms