RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 FAM83DQ9H4H8 585 aa18.27■□□□□ 0.52
SCARF1-206ENST00000573852 TRIM39Q9HCM9 518 aa18.27■□□□□ 0.52
SCARF1-206ENST00000573852 ATP6V1HQ9UI12 483 aa18.27■□□□□ 0.52
SCARF1-206ENST00000573852 OGDHLQ9ULD0 1010 aa18.27■□□□□ 0.52
SCARF1-206ENST00000573852 INSL5Q9Y5Q6 135 aa18.27■□□□□ 0.52
SCARF1-206ENST00000573852 SNX8Q9Y5X2 465 aa18.27■□□□□ 0.52
SCARF1-206ENST00000573852 SCN5AQ14524 2016 aa18.27■□□□□ 0.52
SCARF1-206ENST00000573852 PLK4O00444 970 aa18.27■□□□□ 0.52
SCARF1-206ENST00000573852 ETV6P41212 452 aa18.27■□□□□ 0.52
SCARF1-206ENST00000573852 PIK3CBP42338 1070 aa18.27■□□□□ 0.52
SCARF1-206ENST00000573852 XCR1P46094 333 aa18.27■□□□□ 0.52
SCARF1-206ENST00000573852 LIMS1P48059 325 aa18.27■□□□□ 0.52
SCARF1-206ENST00000573852 PRIM2P49643 509 aa18.27■□□□□ 0.52
SCARF1-206ENST00000573852 DGKEP52429 567 aa18.27■□□□□ 0.52
SCARF1-206ENST00000573852 EEF1A2Q05639 463 aaKnown RBP18.27■□□□□ 0.52
SCARF1-206ENST00000573852 MPEG1Q2M385 716 aa18.27■□□□□ 0.52
SCARF1-206ENST00000573852 CPXM2Q8N436 756 aa18.27■□□□□ 0.52
SCARF1-206ENST00000573852 IL17RDQ8NFM7 739 aa18.27■□□□□ 0.52
SCARF1-206ENST00000573852 NEIL2Q969S2 332 aa18.27■□□□□ 0.52
SCARF1-206ENST00000573852 PKP4Q99569 1192 aa18.27■□□□□ 0.52
SCARF1-206ENST00000573852 CDCA4Q9BXL8 241 aa18.27■□□□□ 0.52
SCARF1-206ENST00000573852 NUAK2Q9H093 628 aa18.27■□□□□ 0.52
SCARF1-206ENST00000573852 REEP4Q9H6H4 257 aa18.27■□□□□ 0.52
SCARF1-206ENST00000573852 C14orf119Q9NWQ9 140 aa18.27■□□□□ 0.52
SCARF1-206ENST00000573852 HCN4Q9Y3Q4 1203 aa18.27■□□□□ 0.52
SCARF1-206ENST00000573852 MAP4K5Q9Y4K4 846 aa18.27■□□□□ 0.52
SCARF1-206ENST00000573852 NRG2O14511 850 aaPredicted RBP18.26■□□□□ 0.51
SCARF1-206ENST00000573852 TSPAN6O43657 245 aa18.26■□□□□ 0.51
SCARF1-206ENST00000573852 POP4O95707 220 aaKnown RBP18.26■□□□□ 0.51
SCARF1-206ENST00000573852 EIF2S1P05198 315 aaKnown RBP18.26■□□□□ 0.51
SCARF1-206ENST00000573852 SPANXN2Q5MJ10 180 aa18.26■□□□□ 0.51
SCARF1-206ENST00000573852 Q6ZVU0 165 aa18.26■□□□□ 0.51
SCARF1-206ENST00000573852 PSD4Q8NDX1 1056 aa18.26■□□□□ 0.51
SCARF1-206ENST00000573852 PUM2Q8TB72 1066 aaKnown RBP eCLIP18.26■□□□□ 0.51
SCARF1-206ENST00000573852 PIP5K1AQ99755 562 aa18.26■□□□□ 0.51
SCARF1-206ENST00000573852 RHCGQ9UBD6 479 aa18.26■□□□□ 0.51
SCARF1-206ENST00000573852 MKLN1Q9UL63 735 aa18.26■□□□□ 0.51
SCARF1-206ENST00000573852 MAPRE3Q9UPY8 281 aa18.26■□□□□ 0.51
SCARF1-206ENST00000573852 A8MVJ9 347 aa18.26■□□□□ 0.51
SCARF1-206ENST00000573852 SAP18O00422 153 aaKnown RBP18.26■□□□□ 0.51
SCARF1-206ENST00000573852 ARHGAP33O14559 1287 aa18.26■□□□□ 0.51
SCARF1-206ENST00000573852 NPC1O15118 1278 aa18.26■□□□□ 0.51
SCARF1-206ENST00000573852 SOD2P04179 222 aa18.26■□□□□ 0.51
SCARF1-206ENST00000573852 CBLP22681 906 aa18.26■□□□□ 0.51
SCARF1-206ENST00000573852 GABRR2P28476 465 aa18.26■□□□□ 0.51
SCARF1-206ENST00000573852 CTSCP53634 463 aa18.26■□□□□ 0.51
SCARF1-206ENST00000573852 CDK6Q00534 326 aa18.26■□□□□ 0.51
SCARF1-206ENST00000573852 SSX1Q16384 188 aa18.26■□□□□ 0.51
SCARF1-206ENST00000573852 GAREM2Q75VX8 874 aa18.26■□□□□ 0.51
SCARF1-206ENST00000573852 CCDC80Q76M96 950 aa18.26■□□□□ 0.51
SCARF1-206ENST00000573852 RNF130Q86XS8 419 aa18.26■□□□□ 0.51
SCARF1-206ENST00000573852 SCLYQ96I15 445 aa18.26■□□□□ 0.51
SCARF1-206ENST00000573852 ERVK13-1Q9NX77 482 aa18.26■□□□□ 0.51
SCARF1-206ENST00000573852 FADS2P1A8MWK0 482 aa18.26■□□□□ 0.51
SCARF1-206ENST00000573852 SNX4O95219 450 aa18.26■□□□□ 0.51
SCARF1-206ENST00000573852 GASTP01350 101 aa18.26■□□□□ 0.51
SCARF1-206ENST00000573852 ZNF24P17028 368 aa18.26■□□□□ 0.51
SCARF1-206ENST00000573852 ITGA2P17301 1181 aa18.26■□□□□ 0.51
SCARF1-206ENST00000573852 SOX6P35712 828 aa18.26■□□□□ 0.51
SCARF1-206ENST00000573852 ETV3P41162 512 aa18.26■□□□□ 0.51
SCARF1-206ENST00000573852 CDC42P60953 191 aa18.26■□□□□ 0.51
SCARF1-206ENST00000573852 RBBP4Q09028 425 aa18.26■□□□□ 0.51
SCARF1-206ENST00000573852 FCHO2Q0JRZ9 810 aa18.26■□□□□ 0.51
SCARF1-206ENST00000573852 SLC5A12Q1EHB4 618 aa18.26■□□□□ 0.51
SCARF1-206ENST00000573852 ASTLQ6HA08 431 aaPredicted RBP18.26■□□□□ 0.51
SCARF1-206ENST00000573852 KLHL17Q6TDP4 642 aa18.26■□□□□ 0.51
SCARF1-206ENST00000573852 SLCO4C1Q6ZQN7 724 aa18.26■□□□□ 0.51
SCARF1-206ENST00000573852 ARMCX6Q7L4S7 300 aa18.26■□□□□ 0.51
SCARF1-206ENST00000573852 TMPRSS11BQ86T26 416 aa18.26■□□□□ 0.51
SCARF1-206ENST00000573852 LMNTD1Q8N9Z9 388 aa18.26■□□□□ 0.51
SCARF1-206ENST00000573852 AQP11Q8NBQ7 271 aa18.26■□□□□ 0.51
SCARF1-206ENST00000573852 OR56A3Q8NH54 315 aa18.26■□□□□ 0.51
SCARF1-206ENST00000573852 C9orf43Q8TAL5 461 aaPredicted RBP18.26■□□□□ 0.51
SCARF1-206ENST00000573852 CAPSLQ8WWF8 208 aa18.26■□□□□ 0.51
SCARF1-206ENST00000573852 ZNF486Q96H40 463 aaPredicted RBP18.26■□□□□ 0.51
SCARF1-206ENST00000573852 TMEM38AQ9H6F2 299 aa18.26■□□□□ 0.51
SCARF1-206ENST00000573852 MRPL17Q9NRX2 175 aaKnown RBP18.26■□□□□ 0.51
SCARF1-206ENST00000573852 FTSJ1Q9UET6 329 aa18.26■□□□□ 0.51
SCARF1-206ENST00000573852 EFCAB10A6NFE3 127 aa18.25■□□□□ 0.51
SCARF1-206ENST00000573852 GPX5O75715 221 aa18.25■□□□□ 0.51
SCARF1-206ENST00000573852 GADD45GO95257 159 aa18.25■□□□□ 0.51
SCARF1-206ENST00000573852 TM4SF4P48230 202 aa18.25■□□□□ 0.51
SCARF1-206ENST00000573852 HMGA2P52926 109 aa18.25■□□□□ 0.51
SCARF1-206ENST00000573852 PCDH1Q08174 1060 aa18.25■□□□□ 0.51
SCARF1-206ENST00000573852 ZNF763Q0D2J5 394 aa18.25■□□□□ 0.51
SCARF1-206ENST00000573852 PRSS53Q2L4Q9 553 aa18.25■□□□□ 0.51
SCARF1-206ENST00000573852 SYTL3Q4VX76 610 aa18.25■□□□□ 0.51
SCARF1-206ENST00000573852 IER5LQ5T953 404 aa18.25■□□□□ 0.51
SCARF1-206ENST00000573852 CHAC2Q8WUX2 184 aa18.25■□□□□ 0.51
SCARF1-206ENST00000573852 GEMIN6Q8WXD5 167 aaKnown RBP18.25■□□□□ 0.51
SCARF1-206ENST00000573852 MYLIPQ8WY64 445 aa18.25■□□□□ 0.51
SCARF1-206ENST00000573852 TSEN34Q9BSV6 310 aaKnown RBP18.25■□□□□ 0.51
SCARF1-206ENST00000573852 RIOK2Q9BVS4 552 aaKnown RBP18.25■□□□□ 0.51
SCARF1-206ENST00000573852 SH2B3Q9UQQ2 575 aa18.25■□□□□ 0.51
SCARF1-206ENST00000573852 PNMA8CA0A1B0GUJ8 204 aa18.25■□□□□ 0.51
SCARF1-206ENST00000573852 FAM227AF5H4B4 570 aa18.25■□□□□ 0.51
SCARF1-206ENST00000573852 AP2A2O94973 939 aa18.25■□□□□ 0.51
SCARF1-206ENST00000573852 CCNB2O95067 398 aa18.25■□□□□ 0.51
SCARF1-206ENST00000573852 RECKO95980 971 aa18.25■□□□□ 0.51
SCARF1-206ENST00000573852 CHMP24386 653 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms