RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 OR4D2P58180 307 aa16.34■□□□□ 0.21
SMG6-214ENST00000573827 ZNF33BQ06732 778 aa16.34■□□□□ 0.21
SMG6-214ENST00000573827 NAB1Q13506 487 aa16.34■□□□□ 0.21
SMG6-214ENST00000573827 TUBA3CQ13748 450 aa16.34■□□□□ 0.21
SMG6-214ENST00000573827 DOC2AQ14183 400 aa16.34■□□□□ 0.21
SMG6-214ENST00000573827 TUBA3EQ6PEY2 450 aa16.34■□□□□ 0.21
SMG6-214ENST00000573827 ARMC10Q8N2F6 343 aa16.34■□□□□ 0.21
SMG6-214ENST00000573827 KIF2BQ8N4N8 673 aa16.34■□□□□ 0.21
SMG6-214ENST00000573827 BCORP1Q8N888 145 aa16.34■□□□□ 0.21
SMG6-214ENST00000573827 TMEM52Q8NDY8 209 aa16.34■□□□□ 0.21
SMG6-214ENST00000573827 TTLQ8NG68 377 aa16.34■□□□□ 0.21
SMG6-214ENST00000573827 UBTD2Q8WUN7 234 aa16.34■□□□□ 0.21
SMG6-214ENST00000573827 NR4A3Q92570 626 aa16.34■□□□□ 0.21
SMG6-214ENST00000573827 LPAR4Q99677 370 aa16.34■□□□□ 0.21
SMG6-214ENST00000573827 ALG9Q9H6U8 611 aa16.34■□□□□ 0.21
SMG6-214ENST00000573827 OLAHQ9NV23 265 aa16.34■□□□□ 0.21
SMG6-214ENST00000573827 WWOXQ9NZC7 414 aa16.34■□□□□ 0.21
SMG6-214ENST00000573827 SLC5A6Q9Y289 635 aa16.34■□□□□ 0.21
SMG6-214ENST00000573827 MYO7BQ6PIF6 2116 aa16.34■□□□□ 0.21
SMG6-214ENST00000573827 ADGRG4Q8IZF6 3080 aa16.33■□□□□ 0.21
SMG6-214ENST00000573827 URADA6NGE7 173 aa16.33■□□□□ 0.2
SMG6-214ENST00000573827 PRMT3O60678 531 aa16.33■□□□□ 0.2
SMG6-214ENST00000573827 CLDN1O95832 211 aa16.33■□□□□ 0.2
SMG6-214ENST00000573827 MST1P26927 711 aa16.33■□□□□ 0.2
SMG6-214ENST00000573827 HNRNPFP52597 415 aaKnown RBP16.33■□□□□ 0.2
SMG6-214ENST00000573827 BTN3A2P78410 334 aa16.33■□□□□ 0.2
SMG6-214ENST00000573827 TBCCQ15814 346 aa16.33■□□□□ 0.2
SMG6-214ENST00000573827 PDK4Q16654 411 aa16.33■□□□□ 0.2
SMG6-214ENST00000573827 ABHD17CQ6PCB6 329 aa16.33■□□□□ 0.2
SMG6-214ENST00000573827 FAM180AQ6UWF9 173 aa16.33■□□□□ 0.2
SMG6-214ENST00000573827 UBE3DQ7Z6J8 389 aa16.33■□□□□ 0.2
SMG6-214ENST00000573827 RELL1Q8IUW5 271 aa16.33■□□□□ 0.2
SMG6-214ENST00000573827 LGI4Q8N135 537 aa16.33■□□□□ 0.2
SMG6-214ENST00000573827 ZNF354BQ96LW1 612 aa16.33■□□□□ 0.2
SMG6-214ENST00000573827 PTCHD1Q96NR3 888 aa16.33■□□□□ 0.2
SMG6-214ENST00000573827 GPR78Q96P69 363 aa16.33■□□□□ 0.2
SMG6-214ENST00000573827 SIGLEC12Q96PQ1 595 aa16.33■□□□□ 0.2
SMG6-214ENST00000573827 CAPS2Q9BXY5 557 aa16.33■□□□□ 0.2
SMG6-214ENST00000573827 FUT8Q9BYC5 575 aa16.33■□□□□ 0.2
SMG6-214ENST00000573827 CD244Q9BZW8 370 aa16.33■□□□□ 0.2
SMG6-214ENST00000573827 CNOT10Q9H9A5 744 aaKnown RBP16.33■□□□□ 0.2
SMG6-214ENST00000573827 KCNK13Q9HB14 408 aa16.33■□□□□ 0.2
SMG6-214ENST00000573827 PRDM9Q9NQV7 894 aa16.33■□□□□ 0.2
SMG6-214ENST00000573827 ABI3Q9P2A4 366 aa16.33■□□□□ 0.2
SMG6-214ENST00000573827 DMGDHQ9UI17 866 aaKnown RBP16.33■□□□□ 0.2
SMG6-214ENST00000573827 TEKT2Q9UIF3 430 aa16.33■□□□□ 0.2
SMG6-214ENST00000573827 PPIEQ9UNP9 301 aaKnown RBP16.33■□□□□ 0.2
SMG6-214ENST00000573827 PCDHGB6Q9Y5F9 930 aa16.33■□□□□ 0.2
SMG6-214ENST00000573827 APCP25054 2843 aa16.33■□□□□ 0.2
SMG6-214ENST00000573827 A0A0G2JN53 185 aa16.32■□□□□ 0.2
SMG6-214ENST00000573827 SAGE2PA6NJ88 616 aa16.32■□□□□ 0.2
SMG6-214ENST00000573827 ERI3O43414 337 aaKnown RBP16.32■□□□□ 0.2
SMG6-214ENST00000573827 KERAO60938 352 aa16.32■□□□□ 0.2
SMG6-214ENST00000573827 H2AFYO75367 372 aaKnown RBP16.32■□□□□ 0.2
SMG6-214ENST00000573827 STSP08842 583 aa16.32■□□□□ 0.2
SMG6-214ENST00000573827 TFEBP19484 476 aa16.32■□□□□ 0.2
SMG6-214ENST00000573827 CRABP2P29373 138 aa16.32■□□□□ 0.2
SMG6-214ENST00000573827 ECHS1P30084 290 aa16.32■□□□□ 0.2
SMG6-214ENST00000573827 CD96P40200 585 aa16.32■□□□□ 0.2
SMG6-214ENST00000573827 ST13P50502 369 aaKnown RBP16.32■□□□□ 0.2
SMG6-214ENST00000573827 STXBP1P61764 594 aaKnown RBP16.32■□□□□ 0.2
SMG6-214ENST00000573827 IRF9Q00978 393 aa16.32■□□□□ 0.2
SMG6-214ENST00000573827 SRSF11Q05519 484 aaKnown RBP16.32■□□□□ 0.2
SMG6-214ENST00000573827 CKAP4Q07065 602 aaKnown RBP16.32■□□□□ 0.2
SMG6-214ENST00000573827 SLMAPQ14BN4 828 aa16.32■□□□□ 0.2
SMG6-214ENST00000573827 CROCCQ5TZA2 2017 aa16.32■□□□□ 0.2
SMG6-214ENST00000573827 ZNF468Q5VIY5 522 aaPredicted RBP16.32■□□□□ 0.2
SMG6-214ENST00000573827 C8orf74Q6P047 294 aa16.32■□□□□ 0.2
SMG6-214ENST00000573827 ZNF227Q86WZ6 799 aa16.32■□□□□ 0.2
SMG6-214ENST00000573827 KRT78Q8N1N4 520 aa16.32■□□□□ 0.2
SMG6-214ENST00000573827 NOA1Q8NC60 698 aaKnown RBP16.32■□□□□ 0.2
SMG6-214ENST00000573827 OR2L5Q8NG80 312 aa16.32■□□□□ 0.2
SMG6-214ENST00000573827 STAG3L4Q8TBR4 150 aa16.32■□□□□ 0.2
SMG6-214ENST00000573827 PTCD3Q96EY7 689 aaKnown RBP16.32■□□□□ 0.2
SMG6-214ENST00000573827 SCMH1Q96GD3 660 aa16.32■□□□□ 0.2
SMG6-214ENST00000573827 C16orf45Q96MC5 204 aaPredicted RBP16.32■□□□□ 0.2
SMG6-214ENST00000573827 EFCAB11Q9BUY7 163 aa16.32■□□□□ 0.2
SMG6-214ENST00000573827 NPLQ9BXD5 320 aaPredicted RBP16.32■□□□□ 0.2
SMG6-214ENST00000573827 HES7Q9BYE0 225 aa16.32■□□□□ 0.2
SMG6-214ENST00000573827 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.32■□□□□ 0.2
SMG6-214ENST00000573827 PRDM7Q9NQW5 492 aa16.32■□□□□ 0.2
SMG6-214ENST00000573827 NINJ2Q9NZG7 142 aa16.32■□□□□ 0.2
SMG6-214ENST00000573827 NUDT4Q9NZJ9 180 aa16.32■□□□□ 0.2
SMG6-214ENST00000573827 CD274Q9NZQ7 290 aa16.32■□□□□ 0.2
SMG6-214ENST00000573827 RNF112Q9ULX5 631 aa16.32■□□□□ 0.2
SMG6-214ENST00000573827 MMACHCQ9Y4U1 282 aa16.32■□□□□ 0.2
SMG6-214ENST00000573827 TACC2O95359 2948 aa16.31■□□□□ 0.2
SMG6-214ENST00000573827 DCHS2Q6V1P9 2916 aa16.31■□□□□ 0.2
SMG6-214ENST00000573827 UBXN8O00124 270 aa16.31■□□□□ 0.2
SMG6-214ENST00000573827 CYR61O00622 381 aa16.31■□□□□ 0.2
SMG6-214ENST00000573827 NEURL1O76050 574 aa16.31■□□□□ 0.2
SMG6-214ENST00000573827 C2P06681 752 aa16.31■□□□□ 0.2
SMG6-214ENST00000573827 LTA4HP09960 611 aaKnown RBP16.31■□□□□ 0.2
SMG6-214ENST00000573827 GPR143P51810 404 aa16.31■□□□□ 0.2
SMG6-214ENST00000573827 ACTN3Q08043 901 aaPredicted RBP16.31■□□□□ 0.2
SMG6-214ENST00000573827 BMPR2Q13873 1038 aa16.31■□□□□ 0.2
SMG6-214ENST00000573827 MEP1AQ16819 746 aa16.31■□□□□ 0.2
SMG6-214ENST00000573827 WHAMMP3Q1A5X7 153 aa16.31■□□□□ 0.2
SMG6-214ENST00000573827 C4orf17Q53FE4 359 aa16.31■□□□□ 0.2
SMG6-214ENST00000573827 XKR6Q5GH73 641 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms