RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 IFRD1O00458 451 aaPredicted RBP15.64■□□□□ 0.09
LINC00554-201ENST00000564841 CPSF4O95639 269 aaKnown RBP15.64■□□□□ 0.09
LINC00554-201ENST00000564841 GABRB1P18505 474 aa15.64■□□□□ 0.09
LINC00554-201ENST00000564841 ABHD18Q0P651 414 aa15.64■□□□□ 0.09
LINC00554-201ENST00000564841 LIPKQ5VXJ0 399 aa15.64■□□□□ 0.09
LINC00554-201ENST00000564841 LINGO4Q6UY18 593 aa15.64■□□□□ 0.09
LINC00554-201ENST00000564841 EIF3MQ7L2H7 374 aaKnown RBP15.64■□□□□ 0.09
LINC00554-201ENST00000564841 WDR53Q7Z5U6 358 aaPredicted RBP15.64■□□□□ 0.09
LINC00554-201ENST00000564841 C9orf62Q8N4C0 152 aa15.64■□□□□ 0.09
LINC00554-201ENST00000564841 CDC26Q8NHZ8 85 aa15.64■□□□□ 0.09
LINC00554-201ENST00000564841 SPPL2AQ8TCT8 520 aa15.64■□□□□ 0.09
LINC00554-201ENST00000564841 RIT1Q92963 219 aa15.64■□□□□ 0.09
LINC00554-201ENST00000564841 ZYG11BQ9C0D3 744 aa15.64■□□□□ 0.09
LINC00554-201ENST00000564841 MYO9BQ13459 2157 aa15.64■□□□□ 0.09
LINC00554-201ENST00000564841 J3KTA2 159 aa15.64■□□□□ 0.09
LINC00554-201ENST00000564841 RAMP2O60895 175 aa15.64■□□□□ 0.09
LINC00554-201ENST00000564841 CHMP24386 653 aa15.64■□□□□ 0.09
LINC00554-201ENST00000564841 RUNX1T1Q06455 604 aa15.64■□□□□ 0.09
LINC00554-201ENST00000564841 SERPINB11Q96P15 392 aa15.64■□□□□ 0.09
LINC00554-201ENST00000564841 B3GNT2Q9NY97 397 aa15.64■□□□□ 0.09
LINC00554-201ENST00000564841 PCDHGA2Q9Y5H1 932 aa15.64■□□□□ 0.09
LINC00554-201ENST00000564841 LOC285095A0A1B0GVY8 99 aa15.63■□□□□ 0.09
LINC00554-201ENST00000564841 FAM227AF5H4B4 570 aa15.63■□□□□ 0.09
LINC00554-201ENST00000564841 SSTR2P30874 369 aa15.63■□□□□ 0.09
LINC00554-201ENST00000564841 SMSP52788 366 aa15.63■□□□□ 0.09
LINC00554-201ENST00000564841 SF1Q15637 639 aaKnown RBP15.63■□□□□ 0.09
LINC00554-201ENST00000564841 TAF12Q16514 161 aa15.63■□□□□ 0.09
LINC00554-201ENST00000564841 VMACQ2NL98 169 aa15.63■□□□□ 0.09
LINC00554-201ENST00000564841 FRMPD2BQ6IN97 320 aa15.63■□□□□ 0.09
LINC00554-201ENST00000564841 C16orf62Q7Z3J2 963 aa15.63■□□□□ 0.09
LINC00554-201ENST00000564841 PTOV1Q86YD1 416 aa15.63■□□□□ 0.09
LINC00554-201ENST00000564841 ZZZ3Q8IYH5 903 aa15.63■□□□□ 0.09
LINC00554-201ENST00000564841 SLC34A3Q8N130 599 aa15.63■□□□□ 0.09
LINC00554-201ENST00000564841 C7orf57Q8NEG2 295 aa15.63■□□□□ 0.09
LINC00554-201ENST00000564841 PHF21AQ96BD5 680 aa15.63■□□□□ 0.09
LINC00554-201ENST00000564841 C7orf34Q96L11 122 aa15.63■□□□□ 0.09
LINC00554-201ENST00000564841 QRFPRQ96P65 431 aa15.63■□□□□ 0.09
LINC00554-201ENST00000564841 GABARAPL3Q9BY60 117 aa15.63■□□□□ 0.09
LINC00554-201ENST00000564841 POPDC3Q9HBV1 291 aa15.63■□□□□ 0.09
LINC00554-201ENST00000564841 CASP8AP2Q9UKL3 1982 aa15.63■□□□□ 0.09
LINC00554-201ENST00000564841 LOC730098B7Z3J9 87 aa15.63■□□□□ 0.09
LINC00554-201ENST00000564841 ULK1O75385 1050 aa15.63■□□□□ 0.09
LINC00554-201ENST00000564841 CRYBB2P43320 205 aa15.63■□□□□ 0.09
LINC00554-201ENST00000564841 CDH12P55289 794 aa15.63■□□□□ 0.09
LINC00554-201ENST00000564841 LRRC32Q14392 662 aa15.63■□□□□ 0.09
LINC00554-201ENST00000564841 WSCD2Q2TBF2 565 aa15.63■□□□□ 0.09
LINC00554-201ENST00000564841 MSANTD2Q6P1R3 559 aa15.63■□□□□ 0.09
LINC00554-201ENST00000564841 C19orf48Q6RUI8 117 aa15.63■□□□□ 0.09
LINC00554-201ENST00000564841 CLECL1Q8IZS7 167 aa15.63■□□□□ 0.09
LINC00554-201ENST00000564841 ZBTB44Q8NCP5 570 aa15.63■□□□□ 0.09
LINC00554-201ENST00000564841 ZNF680Q8NEM1 530 aa15.63■□□□□ 0.09
LINC00554-201ENST00000564841 OR9Q1Q8NGQ5 310 aa15.63■□□□□ 0.09
LINC00554-201ENST00000564841 C1orf74Q96LT6 269 aa15.63■□□□□ 0.09
LINC00554-201ENST00000564841 KCNH6Q9H252 994 aa15.63■□□□□ 0.09
LINC00554-201ENST00000564841 FBXO44Q9H4M3 255 aa15.63■□□□□ 0.09
LINC00554-201ENST00000564841 KLHL21Q9UJP4 597 aa15.63■□□□□ 0.09
LINC00554-201ENST00000564841 CLIC1O00299 241 aa15.62■□□□□ 0.09
LINC00554-201ENST00000564841 TNFRSF11BO00300 401 aa15.62■□□□□ 0.09
LINC00554-201ENST00000564841 WNT9AO14904 365 aa15.62■□□□□ 0.09
LINC00554-201ENST00000564841 TAPBPO15533 448 aa15.62■□□□□ 0.09
LINC00554-201ENST00000564841 RGS14O43566 566 aa15.62■□□□□ 0.09
LINC00554-201ENST00000564841 SEMG1P04279 462 aa15.62■□□□□ 0.09
LINC00554-201ENST00000564841 IGFBP1P08833 259 aaPredicted RBP15.62■□□□□ 0.09
LINC00554-201ENST00000564841 ACADMP11310 421 aa15.62■□□□□ 0.09
LINC00554-201ENST00000564841 PKMP14618 531 aaKnown RBP15.62■□□□□ 0.09
LINC00554-201ENST00000564841 CPN2P22792 545 aa15.62■□□□□ 0.09
LINC00554-201ENST00000564841 HLA-DMAP28067 261 aa15.62■□□□□ 0.09
LINC00554-201ENST00000564841 ITGA1P56199 1179 aa15.62■□□□□ 0.09
LINC00554-201ENST00000564841 RPS24P62847 133 aaKnown RBP15.62■□□□□ 0.09
LINC00554-201ENST00000564841 OLR1P78380 273 aa15.62■□□□□ 0.09
LINC00554-201ENST00000564841 ACVR1Q04771 509 aa15.62■□□□□ 0.09
LINC00554-201ENST00000564841 UAP1L1Q3KQV9 507 aa15.62■□□□□ 0.09
LINC00554-201ENST00000564841 C22orf42Q6IC83 251 aa15.62■□□□□ 0.09
LINC00554-201ENST00000564841 C16orf59Q7L2K0 433 aa15.62■□□□□ 0.09
LINC00554-201ENST00000564841 NPAS4Q8IUM7 802 aa15.62■□□□□ 0.09
LINC00554-201ENST00000564841 NKAPQ8N5F7 415 aaKnown RBP15.62■□□□□ 0.09
LINC00554-201ENST00000564841 OR10G2Q8NGC3 310 aa15.62■□□□□ 0.09
LINC00554-201ENST00000564841 OR6K2Q8NGY2 324 aa15.62■□□□□ 0.09
LINC00554-201ENST00000564841 DCLRE1CQ96SD1 692 aaKnown RBP15.62■□□□□ 0.09
LINC00554-201ENST00000564841 FAM129BQ96TA1 746 aa15.62■□□□□ 0.09
LINC00554-201ENST00000564841 TRAF4Q9BUZ4 470 aaPredicted RBP15.62■□□□□ 0.09
LINC00554-201ENST00000564841 TAPBPLQ9BX59 468 aa15.62■□□□□ 0.09
LINC00554-201ENST00000564841 EBPLQ9BY08 206 aa15.62■□□□□ 0.09
LINC00554-201ENST00000564841 GKN1Q9NS71 199 aa15.62■□□□□ 0.09
LINC00554-201ENST00000564841 ING3Q9NXR8 418 aa15.62■□□□□ 0.09
LINC00554-201ENST00000564841 COMMD3Q9UBI1 195 aa15.62■□□□□ 0.09
LINC00554-201ENST00000564841 VWA8A3KMH1 1905 aa15.62■□□□□ 0.09
LINC00554-201ENST00000564841 E9PQ18 207 aa15.62■□□□□ 0.09
LINC00554-201ENST00000564841 VPS26AO75436 327 aa15.62■□□□□ 0.09
LINC00554-201ENST00000564841 SYPP08247 313 aa15.62■□□□□ 0.09
LINC00554-201ENST00000564841 CCL5P13501 91 aa15.62■□□□□ 0.09
LINC00554-201ENST00000564841 PRIM2P49643 509 aa15.62■□□□□ 0.09
LINC00554-201ENST00000564841 CSNK2BP67870 215 aa15.62■□□□□ 0.09
LINC00554-201ENST00000564841 PPIGQ13427 754 aaKnown RBP eCLIP15.62■□□□□ 0.09
LINC00554-201ENST00000564841 SUZ12Q15022 739 aaKnown RBP15.62■□□□□ 0.09
LINC00554-201ENST00000564841 ZNF367Q7RTV3 350 aa15.62■□□□□ 0.09
LINC00554-201ENST00000564841 LIX1LQ8IVB5 337 aa15.62■□□□□ 0.09
LINC00554-201ENST00000564841 FBXO22Q8NEZ5 403 aa15.62■□□□□ 0.09
LINC00554-201ENST00000564841 LPCAT1Q8NF37 534 aa15.62■□□□□ 0.09
LINC00554-201ENST00000564841 MDGA1Q8NFP4 955 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms