RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 ZXDCQ2QGD7 858 aaPredicted RBP15.83■□□□□ 0.12
TPM1-228ENST00000560975 WSCD2Q2TBF2 565 aa15.83■□□□□ 0.12
TPM1-228ENST00000560975 IFI44LQ53G44 452 aa15.83■□□□□ 0.12
TPM1-228ENST00000560975 COX20Q5RI15 118 aa15.83■□□□□ 0.12
TPM1-228ENST00000560975 CREB3L2Q70SY1 520 aa15.83■□□□□ 0.12
TPM1-228ENST00000560975 TIGD4Q8IY51 512 aa15.83■□□□□ 0.12
TPM1-228ENST00000560975 GDPD1Q8N9F7 314 aa15.83■□□□□ 0.12
TPM1-228ENST00000560975 BTN2A2Q8WVV5 523 aa15.83■□□□□ 0.12
TPM1-228ENST00000560975 PCNPQ8WW12 178 aaKnown RBP15.83■□□□□ 0.12
TPM1-228ENST00000560975 SLC32A1Q9H598 525 aa15.83■□□□□ 0.12
TPM1-228ENST00000560975 CCSER2Q9H7U1 834 aa15.83■□□□□ 0.12
TPM1-228ENST00000560975 PLEKHB1Q9UF11 243 aaPredicted RBP15.83■□□□□ 0.12
TPM1-228ENST00000560975 NINQ8N4C6 2090 aa15.82■□□□□ 0.12
TPM1-228ENST00000560975 GREB1Q4ZG55 1949 aa15.82■□□□□ 0.12
TPM1-228ENST00000560975 LOC102723532A0A0G2JNH3 316 aa15.82■□□□□ 0.12
TPM1-228ENST00000560975 HYKKA2RU49 373 aa15.82■□□□□ 0.12
TPM1-228ENST00000560975 WASHC1A8K0Z3 465 aa15.82■□□□□ 0.12
TPM1-228ENST00000560975 DPM1O60762 260 aa15.82■□□□□ 0.12
TPM1-228ENST00000560975 GASTP01350 101 aa15.82■□□□□ 0.12
TPM1-228ENST00000560975 POLR2CP19387 275 aaPredicted RBP15.82■□□□□ 0.12
TPM1-228ENST00000560975 CSTF2P33240 577 aaKnown RBP eCLIP15.82■□□□□ 0.12
TPM1-228ENST00000560975 SDC2P34741 201 aa15.82■□□□□ 0.12
TPM1-228ENST00000560975 ABRQ12979 859 aa15.82■□□□□ 0.12
TPM1-228ENST00000560975 MRPL28Q13084 256 aaKnown RBP15.82■□□□□ 0.12
TPM1-228ENST00000560975 MFSD14CQ5VZR4 134 aa15.82■□□□□ 0.12
TPM1-228ENST00000560975 WDR53Q7Z5U6 358 aaPredicted RBP15.82■□□□□ 0.12
TPM1-228ENST00000560975 TRIM69Q86WT6 500 aa15.82■□□□□ 0.12
TPM1-228ENST00000560975 LIX1LQ8IVB5 337 aa15.82■□□□□ 0.12
TPM1-228ENST00000560975 SYT14Q8NB59 555 aa15.82■□□□□ 0.12
TPM1-228ENST00000560975 ATAD1Q8NBU5 361 aa15.82■□□□□ 0.12
TPM1-228ENST00000560975 C11orf65Q8NCR3 313 aa15.82■□□□□ 0.12
TPM1-228ENST00000560975 SLC25A46Q96AG3 418 aa15.82■□□□□ 0.12
TPM1-228ENST00000560975 MTERF3Q96E29 417 aa15.82■□□□□ 0.12
TPM1-228ENST00000560975 ZBED6CLQ96FA7 236 aaPredicted RBP15.82■□□□□ 0.12
TPM1-228ENST00000560975 TINF2Q9BSI4 451 aa15.82■□□□□ 0.12
TPM1-228ENST00000560975 DUSP26Q9BV47 211 aa15.82■□□□□ 0.12
TPM1-228ENST00000560975 TXNL4BQ9NX01 149 aaKnown RBP15.82■□□□□ 0.12
TPM1-228ENST00000560975 LSM2Q9Y333 95 aaKnown RBP15.82■□□□□ 0.12
TPM1-228ENST00000560975 M0QZQ0 153 aa15.82■□□□□ 0.12
TPM1-228ENST00000560975 TRBC1P01850 177 aa15.82■□□□□ 0.12
TPM1-228ENST00000560975 MSL3P1P0C860 447 aa15.82■□□□□ 0.12
TPM1-228ENST00000560975 SLC2A2P11168 524 aaPredicted RBP15.82■□□□□ 0.12
TPM1-228ENST00000560975 RHAGQ02094 409 aa15.82■□□□□ 0.12
TPM1-228ENST00000560975 TAF10Q12962 218 aa15.82■□□□□ 0.12
TPM1-228ENST00000560975 DDI2Q5TDH0 399 aa15.82■□□□□ 0.12
TPM1-228ENST00000560975 ZNF852Q6ZMS4 543 aa15.82■□□□□ 0.12
TPM1-228ENST00000560975 RNF165Q6ZSG1 346 aa15.82■□□□□ 0.12
TPM1-228ENST00000560975 GPR155Q7Z3F1 870 aa15.82■□□□□ 0.12
TPM1-228ENST00000560975 FBXL6Q8N531 539 aa15.82■□□□□ 0.12
TPM1-228ENST00000560975 UPRTQ96BW1 309 aa15.82■□□□□ 0.12
TPM1-228ENST00000560975 MTERF1Q99551 399 aaKnown RBP15.82■□□□□ 0.12
TPM1-228ENST00000560975 TMEM245Q9H330 911 aa15.82■□□□□ 0.12
TPM1-228ENST00000560975 GLTPQ9NZD2 209 aa15.82■□□□□ 0.12
TPM1-228ENST00000560975 HCN4Q9Y3Q4 1203 aa15.82■□□□□ 0.12
TPM1-228ENST00000560975 SNX11Q9Y5W9 270 aa15.82■□□□□ 0.12
TPM1-228ENST00000560975 SH3D21A4FU49 640 aa15.81■□□□□ 0.12
TPM1-228ENST00000560975 PSMA3P25788 255 aa15.81■□□□□ 0.12
TPM1-228ENST00000560975 PTGS2P35354 604 aa15.81■□□□□ 0.12
TPM1-228ENST00000560975 CRISP1P54107 249 aa15.81■□□□□ 0.12
TPM1-228ENST00000560975 OR8H3Q8N146 312 aa15.81■□□□□ 0.12
TPM1-228ENST00000560975 FAM181AQ8N9Y4 354 aa15.81■□□□□ 0.12
TPM1-228ENST00000560975 OR6K2Q8NGY2 324 aa15.81■□□□□ 0.12
TPM1-228ENST00000560975 FBXO44Q9H4M3 255 aa15.81■□□□□ 0.12
TPM1-228ENST00000560975 TMCC3Q9ULS5 477 aa15.81■□□□□ 0.12
TPM1-228ENST00000560975 NLRC5Q86WI3 1866 aa15.81■□□□□ 0.12
TPM1-228ENST00000560975 I3L521 148 aa15.81■□□□□ 0.12
TPM1-228ENST00000560975 PRAMEF4O60810 478 aa15.81■□□□□ 0.12
TPM1-228ENST00000560975 ZNF30P17039 623 aa15.81■□□□□ 0.12
TPM1-228ENST00000560975 SEMG2Q02383 582 aa15.81■□□□□ 0.12
TPM1-228ENST00000560975 TEKQ02763 1124 aa15.81■□□□□ 0.12
TPM1-228ENST00000560975 PRAMEF9Q5VWM5 478 aa15.81■□□□□ 0.12
TPM1-228ENST00000560975 FRMPD2BQ6IN97 320 aa15.81■□□□□ 0.12
TPM1-228ENST00000560975 C16orf59Q7L2K0 433 aa15.81■□□□□ 0.12
TPM1-228ENST00000560975 PHC2Q8IXK0 858 aa15.81■□□□□ 0.12
TPM1-228ENST00000560975 RBFAQ8N0V3 343 aa15.81■□□□□ 0.12
TPM1-228ENST00000560975 Q8N402 240 aa15.81■□□□□ 0.12
TPM1-228ENST00000560975 CPA6Q8N4T0 437 aa15.81■□□□□ 0.12
TPM1-228ENST00000560975 NFKBIDQ8NI38 313 aa15.81■□□□□ 0.12
TPM1-228ENST00000560975 UBTD2Q8WUN7 234 aa15.81■□□□□ 0.12
TPM1-228ENST00000560975 NACC2Q96BF6 587 aa15.81■□□□□ 0.12
TPM1-228ENST00000560975 HHIPQ96QV1 700 aa15.81■□□□□ 0.12
TPM1-228ENST00000560975 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.81■□□□□ 0.12
TPM1-228ENST00000560975 MAGEH1Q9H213 219 aa15.81■□□□□ 0.12
TPM1-228ENST00000560975 C12orf4Q9NQ89 552 aa15.81■□□□□ 0.12
TPM1-228ENST00000560975 DIABLOQ9NR28 239 aa15.81■□□□□ 0.12
TPM1-228ENST00000560975 ACER3Q9NUN7 267 aa15.81■□□□□ 0.12
TPM1-228ENST00000560975 SLC22A14Q9Y267 594 aa15.81■□□□□ 0.12
TPM1-228ENST00000560975 PLXNA4Q9HCM2 1894 aa15.81■□□□□ 0.12
TPM1-228ENST00000560975 H7C0S8 307 aa15.81■□□□□ 0.12
TPM1-228ENST00000560975 MYL12BO14950 172 aa15.81■□□□□ 0.12
TPM1-228ENST00000560975 TPST2O60704 377 aa15.81■□□□□ 0.12
TPM1-228ENST00000560975 GADD45GO95257 159 aa15.81■□□□□ 0.12
TPM1-228ENST00000560975 F11P03951 625 aa15.81■□□□□ 0.12
TPM1-228ENST00000560975 MYL12AP19105 171 aa15.81■□□□□ 0.12
TPM1-228ENST00000560975 P2RY14Q15391 338 aa15.81■□□□□ 0.12
TPM1-228ENST00000560975 FRG2Q64ET8 278 aa15.81■□□□□ 0.12
TPM1-228ENST00000560975 TIGD3Q6B0B8 471 aa15.81■□□□□ 0.12
TPM1-228ENST00000560975 MSANTD1Q6ZTZ1 278 aa15.81■□□□□ 0.12
TPM1-228ENST00000560975 TLK2Q86UE8 772 aa15.81■□□□□ 0.12
TPM1-228ENST00000560975 TAGAPQ8N103 731 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms