RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 OXSMQ9NWU1 459 aa13.25□□□□□ -0.29
PKNOX1-209ENST00000560448 TRPC4Q9UBN4 977 aa13.25□□□□□ -0.29
PKNOX1-209ENST00000560448 SNX6Q9UNH7 406 aa13.25□□□□□ -0.29
PKNOX1-209ENST00000560448 ARL2BPQ9Y2Y0 163 aa13.25□□□□□ -0.29
PKNOX1-209ENST00000560448 PTRH2Q9Y3E5 179 aaKnown RBP13.25□□□□□ -0.29
PKNOX1-209ENST00000560448 MAU2Q9Y6X3 613 aa13.25□□□□□ -0.29
PKNOX1-209ENST00000560448 CCT8L1PA6NM43 557 aa13.24□□□□□ -0.29
PKNOX1-209ENST00000560448 MED26O95402 600 aa13.24□□□□□ -0.29
PKNOX1-209ENST00000560448 ENO1P06733 434 aaKnown RBP13.24□□□□□ -0.29
PKNOX1-209ENST00000560448 ZNF888P0CJ79 500 aaPredicted RBP13.24□□□□□ -0.29
PKNOX1-209ENST00000560448 SFTPCP11686 197 aa13.24□□□□□ -0.29
PKNOX1-209ENST00000560448 IL1RNP18510 177 aa13.24□□□□□ -0.29
PKNOX1-209ENST00000560448 WT1P19544 449 aaPredicted RBP13.24□□□□□ -0.29
PKNOX1-209ENST00000560448 JAK1P23458 1154 aa13.24□□□□□ -0.29
PKNOX1-209ENST00000560448 PTX3P26022 381 aaPredicted RBP13.24□□□□□ -0.29
PKNOX1-209ENST00000560448 RRADP55042 308 aa13.24□□□□□ -0.29
PKNOX1-209ENST00000560448 SRSF6Q13247 344 aaKnown RBP13.24□□□□□ -0.29
PKNOX1-209ENST00000560448 CUL3Q13618 768 aa13.24□□□□□ -0.29
PKNOX1-209ENST00000560448 SLC9A5Q14940 896 aa13.24□□□□□ -0.29
PKNOX1-209ENST00000560448 UNC50Q53HI1 259 aa13.24□□□□□ -0.29
PKNOX1-209ENST00000560448 CFAP157Q5JU67 520 aa13.24□□□□□ -0.29
PKNOX1-209ENST00000560448 FRG2Q64ET8 278 aa13.24□□□□□ -0.29
PKNOX1-209ENST00000560448 BORAQ6PGQ7 559 aa13.24□□□□□ -0.29
PKNOX1-209ENST00000560448 TMEM102Q8N9M5 508 aaPredicted RBP13.24□□□□□ -0.29
PKNOX1-209ENST00000560448 OR52B6Q8NGF0 335 aa13.24□□□□□ -0.29
PKNOX1-209ENST00000560448 OR9A4Q8NGU2 314 aa13.24□□□□□ -0.29
PKNOX1-209ENST00000560448 HUS1BQ8NHY5 278 aa13.24□□□□□ -0.29
PKNOX1-209ENST00000560448 ZCCHC10Q8TBK6 192 aa13.24□□□□□ -0.29
PKNOX1-209ENST00000560448 WDR20Q8TBZ3 569 aa13.24□□□□□ -0.29
PKNOX1-209ENST00000560448 ADAMTS17Q8TE56 1095 aa13.24□□□□□ -0.29
PKNOX1-209ENST00000560448 CCT6BQ92526 530 aa13.24□□□□□ -0.29
PKNOX1-209ENST00000560448 MS4A6EQ96DS6 147 aa13.24□□□□□ -0.29
PKNOX1-209ENST00000560448 MOCOSQ96EN8 888 aa13.24□□□□□ -0.29
PKNOX1-209ENST00000560448 FRG2BQ96QU4 278 aa13.24□□□□□ -0.29
PKNOX1-209ENST00000560448 TBCDQ9BTW9 1192 aa13.24□□□□□ -0.29
PKNOX1-209ENST00000560448 MECRQ9BV79 373 aa13.24□□□□□ -0.29
PKNOX1-209ENST00000560448 MS4A8Q9BY19 250 aa13.24□□□□□ -0.29
PKNOX1-209ENST00000560448 SLC29A3Q9BZD2 475 aa13.24□□□□□ -0.29
PKNOX1-209ENST00000560448 SEMA4BQ9NPR2 832 aaPredicted RBP13.24□□□□□ -0.29
PKNOX1-209ENST00000560448 NAALAD2Q9Y3Q0 740 aa13.24□□□□□ -0.29
PKNOX1-209ENST00000560448 BLACEA4D250 179 aa13.23□□□□□ -0.29
PKNOX1-209ENST00000560448 LRRC14BA6NHZ5 514 aa13.23□□□□□ -0.29
PKNOX1-209ENST00000560448 NKX2-8O15522 239 aa13.23□□□□□ -0.29
PKNOX1-209ENST00000560448 ERI3O43414 337 aaKnown RBP13.23□□□□□ -0.29
PKNOX1-209ENST00000560448 KLHL41O60662 606 aa13.23□□□□□ -0.29
PKNOX1-209ENST00000560448 TRIM13O60858 407 aa13.23□□□□□ -0.29
PKNOX1-209ENST00000560448 SEMA3DO95025 777 aa13.23□□□□□ -0.29
PKNOX1-209ENST00000560448 SNUPNO95149 360 aaKnown RBP13.23□□□□□ -0.29
PKNOX1-209ENST00000560448 KRT6AP02538 564 aa13.23□□□□□ -0.29
PKNOX1-209ENST00000560448 KRT6BP04259 564 aa13.23□□□□□ -0.29
PKNOX1-209ENST00000560448 PCNAP12004 261 aa13.23□□□□□ -0.29
PKNOX1-209ENST00000560448 HSD3B1P14060 373 aa13.23□□□□□ -0.29
PKNOX1-209ENST00000560448 HSD3B2P26439 372 aa13.23□□□□□ -0.29
PKNOX1-209ENST00000560448 KRT6CP48668 564 aa13.23□□□□□ -0.29
PKNOX1-209ENST00000560448 GALNT1Q10472 559 aaPredicted RBP13.23□□□□□ -0.29
PKNOX1-209ENST00000560448 SF3A3Q12874 501 aaKnown RBP eCLIP13.23□□□□□ -0.29
PKNOX1-209ENST00000560448 ERV3-1Q14264 604 aa13.23□□□□□ -0.29
PKNOX1-209ENST00000560448 RBBP7Q16576 425 aa13.23□□□□□ -0.29
PKNOX1-209ENST00000560448 CPSF6Q16630 551 aaKnown RBP eCLIP13.23□□□□□ -0.29
PKNOX1-209ENST00000560448 DEFB134Q4QY38 66 aa13.23□□□□□ -0.29
PKNOX1-209ENST00000560448 TOR1AIP1Q5JTV8 583 aa13.23□□□□□ -0.29
PKNOX1-209ENST00000560448 KHDRBS2Q5VWX1 349 aaKnown RBP13.23□□□□□ -0.29
PKNOX1-209ENST00000560448 C19orf48Q6RUI8 117 aa13.23□□□□□ -0.29
PKNOX1-209ENST00000560448 VN1R5Q7Z5H4 357 aa13.23□□□□□ -0.29
PKNOX1-209ENST00000560448 NUDCD3Q8IVD9 361 aa13.23□□□□□ -0.29
PKNOX1-209ENST00000560448 APLFQ8IW19 511 aaPredicted RBP13.23□□□□□ -0.29
PKNOX1-209ENST00000560448 OR4F6Q8NGB9 312 aa13.23□□□□□ -0.29
PKNOX1-209ENST00000560448 OR51Q1Q8NH59 317 aa13.23□□□□□ -0.29
PKNOX1-209ENST00000560448 APOBEC4Q8WW27 367 aaKnown RBP13.23□□□□□ -0.29
PKNOX1-209ENST00000560448 FER1L6-AS2Q96M78 137 aa13.23□□□□□ -0.29
PKNOX1-209ENST00000560448 NSUN5Q96P11 429 aaKnown RBP13.23□□□□□ -0.29
PKNOX1-209ENST00000560448 SERINC2Q96SA4 455 aa13.23□□□□□ -0.29
PKNOX1-209ENST00000560448 SERPINI1Q99574 410 aa13.23□□□□□ -0.29
PKNOX1-209ENST00000560448 ELOVL6Q9H5J4 265 aa13.23□□□□□ -0.29
PKNOX1-209ENST00000560448 COPS7BQ9H9Q2 264 aaPredicted RBP13.23□□□□□ -0.29
PKNOX1-209ENST00000560448 BRF2Q9HAW0 419 aa13.23□□□□□ -0.29
PKNOX1-209ENST00000560448 EPG5Q9HCE0 2579 aa13.23□□□□□ -0.29
PKNOX1-209ENST00000560448 DMRT3Q9NQL9 472 aa13.23□□□□□ -0.29
PKNOX1-209ENST00000560448 NMRK1Q9NWW6 199 aa13.23□□□□□ -0.29
PKNOX1-209ENST00000560448 KLHL14Q9P2G3 628 aa13.23□□□□□ -0.29
PKNOX1-209ENST00000560448 CTSFQ9UBX1 484 aa13.23□□□□□ -0.29
PKNOX1-209ENST00000560448 TUBD1Q9UJT1 453 aa13.23□□□□□ -0.29
PKNOX1-209ENST00000560448 PRDM4Q9UKN5 801 aa13.23□□□□□ -0.29
PKNOX1-209ENST00000560448 LHX6Q9UPM6 363 aa13.23□□□□□ -0.29
PKNOX1-209ENST00000560448 MRPS18BQ9Y676 258 aaKnown RBP13.23□□□□□ -0.29
PKNOX1-209ENST00000560448 A0A1W2PQ72 361 aa13.22□□□□□ -0.29
PKNOX1-209ENST00000560448 PEX12O00623 359 aa13.22□□□□□ -0.29
PKNOX1-209ENST00000560448 B3GALT2O43825 422 aa13.22□□□□□ -0.29
PKNOX1-209ENST00000560448 SNNO75324 88 aaPredicted RBP13.22□□□□□ -0.29
PKNOX1-209ENST00000560448 SCELO95171 688 aa13.22□□□□□ -0.29
PKNOX1-209ENST00000560448 BMP10O95393 424 aa13.22□□□□□ -0.29
PKNOX1-209ENST00000560448 TGDSO95455 350 aa13.22□□□□□ -0.29
PKNOX1-209ENST00000560448 ESRRBO95718 433 aa13.22□□□□□ -0.29
PKNOX1-209ENST00000560448 ALDH3A1P30838 453 aa13.22□□□□□ -0.29
PKNOX1-209ENST00000560448 CCR10P46092 362 aa13.22□□□□□ -0.29
PKNOX1-209ENST00000560448 MTTPP55157 894 aa13.22□□□□□ -0.29
PKNOX1-209ENST00000560448 CDH13P55290 713 aa13.22□□□□□ -0.29
PKNOX1-209ENST00000560448 RPS18P62269 152 aaKnown RBP13.22□□□□□ -0.29
PKNOX1-209ENST00000560448 AP2B1P63010 937 aa13.22□□□□□ -0.29
PKNOX1-209ENST00000560448 KLC1Q07866 573 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms