RNA–Protein interactions for RNA: ENST00000559433.5

LRRC28-214, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-214ENST00000559433 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.85□□□□□ -0.51
LRRC28-214ENST00000559433 VPS11Q9H270 941 aa11.85□□□□□ -0.51
LRRC28-214ENST00000559433 CLK4Q9HAZ1 481 aaKnown RBP11.85□□□□□ -0.51
LRRC28-214ENST00000559433 STMN3Q9NZ72 180 aa11.85□□□□□ -0.51
LRRC28-214ENST00000559433 OPTCQ9UBM4 332 aa11.85□□□□□ -0.51
LRRC28-214ENST00000559433 A0A088AWK7 358 aa11.84□□□□□ -0.51
LRRC28-214ENST00000559433 A0A0G2JN53 185 aa11.84□□□□□ -0.51
LRRC28-214ENST00000559433 C2orf72A6NCS6 295 aa11.84□□□□□ -0.51
LRRC28-214ENST00000559433 LRIT2A6NDA9 550 aa11.84□□□□□ -0.51
LRRC28-214ENST00000559433 TCP11X1B4DZS4 312 aa11.84□□□□□ -0.51
LRRC28-214ENST00000559433 POC1B-GALNT4F8VUJ3 575 aa11.84□□□□□ -0.51
LRRC28-214ENST00000559433 K7EPI3 171 aa11.84□□□□□ -0.51
LRRC28-214ENST00000559433 KLHL2O95198 593 aa11.84□□□□□ -0.51
LRRC28-214ENST00000559433 GFAPP14136 432 aa11.84□□□□□ -0.51
LRRC28-214ENST00000559433 EPORP19235 508 aa11.84□□□□□ -0.51
LRRC28-214ENST00000559433 CD22P20273 847 aa11.84□□□□□ -0.51
LRRC28-214ENST00000559433 ZNF10P21506 573 aaPredicted RBP11.84□□□□□ -0.51
LRRC28-214ENST00000559433 HPDP32754 393 aaPredicted RBP11.84□□□□□ -0.51
LRRC28-214ENST00000559433 SERPINB9P50453 376 aa11.84□□□□□ -0.51
LRRC28-214ENST00000559433 OR4D2P58180 307 aa11.84□□□□□ -0.51
LRRC28-214ENST00000559433 ACAP2Q15057 778 aa11.84□□□□□ -0.51
LRRC28-214ENST00000559433 NR6A1Q15406 480 aa11.84□□□□□ -0.51
LRRC28-214ENST00000559433 TBCCQ15814 346 aa11.84□□□□□ -0.51
LRRC28-214ENST00000559433 EXT1Q16394 746 aa11.84□□□□□ -0.51
LRRC28-214ENST00000559433 EIF2S3LQ2VIR3 472 aaKnown RBP11.84□□□□□ -0.51
LRRC28-214ENST00000559433 ABHD17BQ5VST6 288 aa11.84□□□□□ -0.51
LRRC28-214ENST00000559433 B3GNTL1Q67FW5 361 aaPredicted RBP11.84□□□□□ -0.51
LRRC28-214ENST00000559433 PLAG1Q6DJT9 500 aa11.84□□□□□ -0.51
LRRC28-214ENST00000559433 ADNP2Q6IQ32 1131 aa11.84□□□□□ -0.51
LRRC28-214ENST00000559433 TRIM40Q6P9F5 258 aa11.84□□□□□ -0.51
LRRC28-214ENST00000559433 PAPD4Q6PIY7 484 aaKnown RBP11.84□□□□□ -0.51
LRRC28-214ENST00000559433 VN1R5Q7Z5H4 357 aa11.84□□□□□ -0.51
LRRC28-214ENST00000559433 IFT20Q8IY31 132 aa11.84□□□□□ -0.51
LRRC28-214ENST00000559433 CA13Q8N1Q1 262 aa11.84□□□□□ -0.51
LRRC28-214ENST00000559433 OR1N1Q8NGS0 311 aa11.84□□□□□ -0.51
LRRC28-214ENST00000559433 LPAR4Q99677 370 aa11.84□□□□□ -0.51
LRRC28-214ENST00000559433 REXO4Q9GZR2 422 aaKnown RBP11.84□□□□□ -0.51
LRRC28-214ENST00000559433 ASF1BQ9NVP2 202 aa11.84□□□□□ -0.51
LRRC28-214ENST00000559433 PLA2G3Q9NZ20 509 aa11.84□□□□□ -0.51
LRRC28-214ENST00000559433 ZNF490Q9ULM2 529 aaPredicted RBP11.84□□□□□ -0.51
LRRC28-214ENST00000559433 NFU1Q9UMS0 254 aa11.84□□□□□ -0.51
LRRC28-214ENST00000559433 ANGPTL3Q9Y5C1 460 aa11.84□□□□□ -0.51
LRRC28-214ENST00000559433 LRRK2Q5S007 2527 aa11.84□□□□□ -0.51
LRRC28-214ENST00000559433 ESPL1Q14674 2120 aa11.83□□□□□ -0.52
LRRC28-214ENST00000559433 A0A087WUV0 522 aaPredicted RBP11.83□□□□□ -0.52
LRRC28-214ENST00000559433 CCDC189A1A4V9 331 aa11.83□□□□□ -0.52
LRRC28-214ENST00000559433 FAM227AF5H4B4 570 aa11.83□□□□□ -0.52
LRRC28-214ENST00000559433 B3GALT2O43825 422 aa11.83□□□□□ -0.52
LRRC28-214ENST00000559433 PRMT3O60678 531 aa11.83□□□□□ -0.52
LRRC28-214ENST00000559433 KRT38O76015 456 aa11.83□□□□□ -0.52
LRRC28-214ENST00000559433 F10P00742 488 aa11.83□□□□□ -0.52
LRRC28-214ENST00000559433 RHOXF2BP0C7M4 288 aa11.83□□□□□ -0.52
LRRC28-214ENST00000559433 PCNAP12004 261 aa11.83□□□□□ -0.52
LRRC28-214ENST00000559433 MTHFD2P13995 350 aa11.83□□□□□ -0.52
LRRC28-214ENST00000559433 EPB42P16452 691 aa11.83□□□□□ -0.52
LRRC28-214ENST00000559433 MAOAP21397 527 aa11.83□□□□□ -0.52
LRRC28-214ENST00000559433 MSH2P43246 934 aa11.83□□□□□ -0.52
LRRC28-214ENST00000559433 TSFMP43897 325 aaKnown RBP11.83□□□□□ -0.52
LRRC28-214ENST00000559433 PLA2G16P53816 162 aa11.83□□□□□ -0.52
LRRC28-214ENST00000559433 ALDH18A1P54886 795 aaKnown RBP11.83□□□□□ -0.52
LRRC28-214ENST00000559433 BTG2P78543 158 aa11.83□□□□□ -0.52
LRRC28-214ENST00000559433 ZNF33BQ06732 778 aa11.83□□□□□ -0.52
LRRC28-214ENST00000559433 TGM3Q08188 693 aa11.83□□□□□ -0.52
LRRC28-214ENST00000559433 SETDB1Q15047 1291 aa11.83□□□□□ -0.52
LRRC28-214ENST00000559433 PFKFB4Q16877 469 aa11.83□□□□□ -0.52
LRRC28-214ENST00000559433 QSOX2Q6ZRP7 698 aa11.83□□□□□ -0.52
LRRC28-214ENST00000559433 CYP4X1Q8N118 509 aa11.83□□□□□ -0.52
LRRC28-214ENST00000559433 TEX9Q8N6V9 391 aa11.83□□□□□ -0.52
LRRC28-214ENST00000559433 CATSPER1Q8NEC5 780 aa11.83□□□□□ -0.52
LRRC28-214ENST00000559433 ARMC2Q8NEN0 867 aa11.83□□□□□ -0.52
LRRC28-214ENST00000559433 OR2L5Q8NG80 312 aa11.83□□□□□ -0.52
LRRC28-214ENST00000559433 UBE2E3Q969T4 207 aa11.83□□□□□ -0.52
LRRC28-214ENST00000559433 PTCHD1Q96NR3 888 aa11.83□□□□□ -0.52
LRRC28-214ENST00000559433 GPR78Q96P69 363 aa11.83□□□□□ -0.52
LRRC28-214ENST00000559433 RHOXF2Q9BQY4 288 aa11.83□□□□□ -0.52
LRRC28-214ENST00000559433 COPS7BQ9H9Q2 264 aaPredicted RBP11.83□□□□□ -0.52
LRRC28-214ENST00000559433 KCNK13Q9HB14 408 aa11.83□□□□□ -0.52
LRRC28-214ENST00000559433 ABI3Q9P2A4 366 aa11.83□□□□□ -0.52
LRRC28-214ENST00000559433 CPSF2Q9P2I0 782 aaKnown RBP11.83□□□□□ -0.52
LRRC28-214ENST00000559433 DOPEY2Q9Y3R5 2298 aa11.83□□□□□ -0.52
LRRC28-214ENST00000559433 PTPN13Q12923 2485 aa11.82□□□□□ -0.52
LRRC28-214ENST00000559433 TRAV17A0A0B4J275 112 aa11.82□□□□□ -0.52
LRRC28-214ENST00000559433 EXOC1LA0A1B0GW35 172 aa11.82□□□□□ -0.52
LRRC28-214ENST00000559433 ANKUB1A6NFN9 424 aa11.82□□□□□ -0.52
LRRC28-214ENST00000559433 WDPCPO95876 746 aa11.82□□□□□ -0.52
LRRC28-214ENST00000559433 TBX6O95947 436 aaPredicted RBP11.82□□□□□ -0.52
LRRC28-214ENST00000559433 CNTFP26441 200 aa11.82□□□□□ -0.52
LRRC28-214ENST00000559433 CERS1P27544 350 aa11.82□□□□□ -0.52
LRRC28-214ENST00000559433 CASP2P42575 452 aa11.82□□□□□ -0.52
LRRC28-214ENST00000559433 MRPL49Q13405 166 aaKnown RBP11.82□□□□□ -0.52
LRRC28-214ENST00000559433 RUNX2Q13950 521 aa11.82□□□□□ -0.52
LRRC28-214ENST00000559433 NAA30Q147X3 362 aaPredicted RBP11.82□□□□□ -0.52
LRRC28-214ENST00000559433 ADPRMQ3LIE5 342 aa11.82□□□□□ -0.52
LRRC28-214ENST00000559433 TECRLQ5HYJ1 363 aa11.82□□□□□ -0.52
LRRC28-214ENST00000559433 MED27Q6P2C8 311 aa11.82□□□□□ -0.52
LRRC28-214ENST00000559433 FAM180AQ6UWF9 173 aa11.82□□□□□ -0.52
LRRC28-214ENST00000559433 MYLK4Q86YV6 388 aaPredicted RBP11.82□□□□□ -0.52
LRRC28-214ENST00000559433 PLD6Q8N2A8 252 aaKnown RBP11.82□□□□□ -0.52
LRRC28-214ENST00000559433 M1APQ8TC57 530 aa11.82□□□□□ -0.52
LRRC28-214ENST00000559433 DCAKDQ8WVC6 231 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms