RNA–Protein interactions for RNA: ENST00000558532.1

HERC1-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-203ENST00000558532 GMCL1P1Q8NEA9 526 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 ZNF548Q8NEK5 533 aaPredicted RBP3.12□□□□□ -1.91
HERC1-203ENST00000558532 TRPV3Q8NET8 790 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 OR7A2PQ8NGA2 310 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 OR1N1Q8NGS0 311 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 SETD6Q8TBK2 473 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 SPATA18Q8TC71 538 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 BLOC1S5Q8TDH9 187 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 STYXQ8WUJ0 223 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 DEPDC1BQ8WUY9 529 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 CANT1Q8WVQ1 401 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 FAR1Q8WVX9 515 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 ZFPM2Q8WW38 1151 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 ZNF606Q8WXB4 792 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 POMGNT1Q8WZA1 660 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 CDKL2Q92772 493 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 USP13Q92995 863 aaPredicted RBP3.12□□□□□ -1.91
HERC1-203ENST00000558532 CFAP36Q96G28 342 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 REXO5Q96IC2 774 aaKnown RBP3.12□□□□□ -1.91
HERC1-203ENST00000558532 ST6GAL2Q96JF0 529 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 ZFYVE19Q96K21 471 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 ZNF560Q96MR9 790 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 MCEEQ96PE7 176 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 QKIQ96PU8 341 aaKnown RBP eCLIP3.12□□□□□ -1.915e-11■■■□□ 17.6
HERC1-203ENST00000558532 RNF157Q96PX1 679 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 IL12RB2Q99665 862 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 NPAS2Q99743 824 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 HOPXQ9BPY8 73 aaPredicted RBP3.12□□□□□ -1.91
HERC1-203ENST00000558532 ZNF670Q9BS34 389 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 MTG1Q9BT17 334 aaPredicted RBP3.12□□□□□ -1.91
HERC1-203ENST00000558532 SLC25A23Q9BV35 468 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 C1QTNF1Q9BXJ1 281 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 LHX5Q9H2C1 402 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 SEMA6AQ9H2E6 1030 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 MMP27Q9H306 513 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 SNX25Q9H3E2 840 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 DSN1Q9H410 356 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 NOL11Q9H8H0 719 aaKnown RBP3.12□□□□□ -1.91
HERC1-203ENST00000558532 MEAF6Q9HAF1 191 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 FANCEQ9HB96 536 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 RAVER2Q9HCJ3 691 aaKnown RBP3.12□□□□□ -1.91
HERC1-203ENST00000558532 ZFP14Q9HCL3 533 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 HPS4Q9NQG7 708 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 ANKEF1Q9NU02 776 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 C20orf96Q9NUD7 363 aaPredicted RBP3.12□□□□□ -1.91
HERC1-203ENST00000558532 ACOXLQ9NUZ1 547 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 TBC1D13Q9NVG8 400 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.12□□□□□ -1.91
HERC1-203ENST00000558532 STMN3Q9NZ72 180 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 NYAP2Q9P242 653 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 MORF4L1Q9UBU8 362 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 SLC9A2Q9UBY0 812 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 ZMAT5Q9UDW3 170 aaKnown RBP3.12□□□□□ -1.91
HERC1-203ENST00000558532 ZNF221Q9UK13 617 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 FBXO9Q9UK97 447 aaPredicted RBP3.12□□□□□ -1.91
HERC1-203ENST00000558532 TBX20Q9UMR3 447 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 TRAPPC4Q9Y296 219 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 CSNK1G3Q9Y6M4 447 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 NRCAMQ92823 1304 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 LOC285556D6RIA3 1793 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 ADAMTSL1Q8N6G6 1762 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 ANK1P16157 1881 aa3.11□□□□□ -1.91
HERC1-203ENST00000558532 COL4A4P53420 1690 aaPredicted RBP3.11□□□□□ -1.91
HERC1-203ENST00000558532 A0A087WV62 115 aa3.11□□□□□ -1.91
HERC1-203ENST00000558532 TRBV5-3A0A0A0MS03 114 aa3.11□□□□□ -1.91
HERC1-203ENST00000558532 A0A0G2JMP0 313 aa3.11□□□□□ -1.91
HERC1-203ENST00000558532 ABHD14A-ACY1A0A1B0GW23 586 aa3.11□□□□□ -1.91
HERC1-203ENST00000558532 AGAP5A6NIR3 686 aa3.11□□□□□ -1.91
HERC1-203ENST00000558532 ZSCAN5BA6NJL1 495 aa3.11□□□□□ -1.91
HERC1-203ENST00000558532 A6NL46 340 aa3.11□□□□□ -1.91
HERC1-203ENST00000558532 TRPC5OSA6NMA1 111 aa3.11□□□□□ -1.91
HERC1-203ENST00000558532 ZNF99A8MXY4 864 aaPredicted RBP3.11□□□□□ -1.91
HERC1-203ENST00000558532 E9PQ18 207 aa3.11□□□□□ -1.91
HERC1-203ENST00000558532 UBXN8O00124 270 aa3.11□□□□□ -1.91
HERC1-203ENST00000558532 CTDSP2O14595 271 aa3.11□□□□□ -1.91
HERC1-203ENST00000558532 SLC9A3R1O14745 358 aaPredicted RBP3.11□□□□□ -1.91
HERC1-203ENST00000558532 MRASO14807 208 aa3.11□□□□□ -1.91
HERC1-203ENST00000558532 ARPC2O15144 300 aa3.11□□□□□ -1.91
HERC1-203ENST00000558532 MDM4O15151 490 aa3.11□□□□□ -1.91
HERC1-203ENST00000558532 SEC14L5O43304 696 aa3.11□□□□□ -1.91
HERC1-203ENST00000558532 DNPH1O43598 174 aa3.11□□□□□ -1.91
HERC1-203ENST00000558532 TLX3O43711 291 aaPredicted RBP3.11□□□□□ -1.91
HERC1-203ENST00000558532 EXTL3O43909 919 aa3.11□□□□□ -1.91
HERC1-203ENST00000558532 DFNA5O60443 496 aa3.11□□□□□ -1.91
HERC1-203ENST00000558532 PEX14O75381 377 aa3.11□□□□□ -1.91
HERC1-203ENST00000558532 TRIM3O75382 744 aaPredicted RBP3.11□□□□□ -1.91
HERC1-203ENST00000558532 TULP3O75386 442 aa3.11□□□□□ -1.91
HERC1-203ENST00000558532 CNTN5O94779 1100 aa3.11□□□□□ -1.91
HERC1-203ENST00000558532 SEMA3DO95025 777 aa3.11□□□□□ -1.91
HERC1-203ENST00000558532 PIGNO95427 931 aa3.11□□□□□ -1.91
HERC1-203ENST00000558532 NADKO95544 446 aaPredicted RBP3.11□□□□□ -1.91
HERC1-203ENST00000558532 TRUB2O95900 331 aaKnown RBP3.11□□□□□ -1.91
HERC1-203ENST00000558532 ASS1P00966 412 aaKnown RBP3.11□□□□□ -1.91
HERC1-203ENST00000558532 WNT1P04628 370 aa3.11□□□□□ -1.91
HERC1-203ENST00000558532 ALPLP05186 524 aa3.11□□□□□ -1.91
HERC1-203ENST00000558532 CHRNGP07510 517 aa3.11□□□□□ -1.91
HERC1-203ENST00000558532 CD63P08962 238 aa3.11□□□□□ -1.91
HERC1-203ENST00000558532 FGF2P09038 288 aa3.11□□□□□ -1.91
HERC1-203ENST00000558532 ACADMP11310 421 aa3.11□□□□□ -1.91
HERC1-203ENST00000558532 PEPDP12955 493 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms