RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 HSPB3Q12988 150 aa10.09□□□□□ -0.79
TPM1-210ENST00000558264 ZNF776Q68DI1 518 aaPredicted RBP10.09□□□□□ -0.79
TPM1-210ENST00000558264 LAIR2Q6ISS4 152 aa10.09□□□□□ -0.79
TPM1-210ENST00000558264 ERICH5Q6P6B1 374 aa10.09□□□□□ -0.79
TPM1-210ENST00000558264 SHQ1Q6PI26 577 aaKnown RBP10.09□□□□□ -0.79
TPM1-210ENST00000558264 SZRD1Q7Z422 152 aa10.09□□□□□ -0.79
TPM1-210ENST00000558264 CAMKMTQ7Z624 323 aa10.09□□□□□ -0.79
TPM1-210ENST00000558264 ATG16L2Q8NAA4 619 aa10.09□□□□□ -0.79
TPM1-210ENST00000558264 CHDHQ8NE62 594 aaPredicted RBP10.09□□□□□ -0.79
TPM1-210ENST00000558264 PJA1Q8NG27 643 aa10.09□□□□□ -0.79
TPM1-210ENST00000558264 UBE2FQ969M7 185 aa10.09□□□□□ -0.79
TPM1-210ENST00000558264 EXOSC8Q96B26 276 aaKnown RBP10.09□□□□□ -0.79
TPM1-210ENST00000558264 ISOC1Q96CN7 298 aa10.09□□□□□ -0.79
TPM1-210ENST00000558264 OTUB1Q96FW1 271 aaPredicted RBP10.09□□□□□ -0.79
TPM1-210ENST00000558264 RHNO1Q9BSD3 238 aa10.09□□□□□ -0.79
TPM1-210ENST00000558264 ASPSCR1Q9BZE9 553 aa10.09□□□□□ -0.79
TPM1-210ENST00000558264 CXorf21Q9HAI6 301 aa10.09□□□□□ -0.79
TPM1-210ENST00000558264 MYNNQ9NPC7 610 aa10.09□□□□□ -0.79
TPM1-210ENST00000558264 KIF17Q9P2E2 1029 aa10.09□□□□□ -0.79
TPM1-210ENST00000558264 ZNF282Q9UDV7 671 aaPredicted RBP10.09□□□□□ -0.79
TPM1-210ENST00000558264 C3orf18Q9UK00 162 aa10.09□□□□□ -0.79
TPM1-210ENST00000558264 BRWD1Q9NSI6 2320 aa10.09□□□□□ -0.79
TPM1-210ENST00000558264 GLOD5A6NK44 160 aa10.09□□□□□ -0.79
TPM1-210ENST00000558264 BCKDKO14874 412 aa10.09□□□□□ -0.79
TPM1-210ENST00000558264 SUV39H1O43463 412 aa10.09□□□□□ -0.79
TPM1-210ENST00000558264 GPR37L1O60883 481 aa10.09□□□□□ -0.79
TPM1-210ENST00000558264 RNGTTO60942 597 aaKnown RBP10.09□□□□□ -0.79
TPM1-210ENST00000558264 TRMUO75648 421 aaKnown RBP10.09□□□□□ -0.79
TPM1-210ENST00000558264 ADH1BP00325 375 aa10.09□□□□□ -0.79
TPM1-210ENST00000558264 PTX3P26022 381 aaPredicted RBP10.09□□□□□ -0.79
TPM1-210ENST00000558264 FMO3P31513 532 aa10.09□□□□□ -0.79
TPM1-210ENST00000558264 PIK3CBP42338 1070 aa10.09□□□□□ -0.79
TPM1-210ENST00000558264 PRIM2P49643 509 aa10.09□□□□□ -0.79
TPM1-210ENST00000558264 KCNJ10P78508 379 aa10.09□□□□□ -0.79
TPM1-210ENST00000558264 PHEXP78562 749 aa10.09□□□□□ -0.79
TPM1-210ENST00000558264 RPA4Q13156 261 aa10.09□□□□□ -0.79
TPM1-210ENST00000558264 RPS26P11Q5JNZ5 115 aaPredicted RBP10.09□□□□□ -0.79
TPM1-210ENST00000558264 KHDRBS2Q5VWX1 349 aaKnown RBP10.09□□□□□ -0.79
TPM1-210ENST00000558264 TTC23Q5W5X9 447 aa10.09□□□□□ -0.79
TPM1-210ENST00000558264 TNFAIP8L2Q6P589 184 aaPredicted RBP10.09□□□□□ -0.79
TPM1-210ENST00000558264 Q6ZPB1 254 aaPredicted RBP10.09□□□□□ -0.79
TPM1-210ENST00000558264 HIPK1Q86Z02 1210 aa10.09□□□□□ -0.79
TPM1-210ENST00000558264 OXR1Q8N573 874 aa10.09□□□□□ -0.79
TPM1-210ENST00000558264 KIAA1958Q8N8K9 716 aa10.09□□□□□ -0.79
TPM1-210ENST00000558264 C11orf65Q8NCR3 313 aa10.09□□□□□ -0.79
TPM1-210ENST00000558264 SETD7Q8WTS6 366 aaKnown RBP10.09□□□□□ -0.79
TPM1-210ENST00000558264 AIF1LQ9BQI0 150 aa10.09□□□□□ -0.79
TPM1-210ENST00000558264 ZNF717Q9BY31 904 aaPredicted RBP10.09□□□□□ -0.79
TPM1-210ENST00000558264 SLC17A9Q9BYT1 436 aa10.09□□□□□ -0.79
TPM1-210ENST00000558264 CCDC90BQ9GZT6 254 aa10.09□□□□□ -0.79
TPM1-210ENST00000558264 CXorf36Q9H7Y0 433 aa10.09□□□□□ -0.79
TPM1-210ENST00000558264 PHPT1Q9NRX4 125 aaPredicted RBP10.09□□□□□ -0.79
TPM1-210ENST00000558264 TMEM184CQ9NVA4 438 aa10.09□□□□□ -0.79
TPM1-210ENST00000558264 ATAD3AQ9NVI7 634 aa10.09□□□□□ -0.79
TPM1-210ENST00000558264 TEX10Q9NXF1 929 aaPredicted RBP10.09□□□□□ -0.79
TPM1-210ENST00000558264 THUMPD1Q9NXG2 353 aaKnown RBP10.09□□□□□ -0.79
TPM1-210ENST00000558264 USE1Q9NZ43 259 aa10.09□□□□□ -0.79
TPM1-210ENST00000558264 CLEC1BQ9P126 229 aa10.09□□□□□ -0.79
TPM1-210ENST00000558264 ORC6Q9Y5N6 252 aa10.09□□□□□ -0.79
TPM1-210ENST00000558264 IGKV1-8A0A0C4DH67 115 aa10.08□□□□□ -0.8
TPM1-210ENST00000558264 J3KTA2 159 aa10.08□□□□□ -0.8
TPM1-210ENST00000558264 TMPRSS11DO60235 418 aa10.08□□□□□ -0.8
TPM1-210ENST00000558264 ADAM23O75077 832 aa10.08□□□□□ -0.8
TPM1-210ENST00000558264 EGFP01133 1207 aa10.08□□□□□ -0.8
TPM1-210ENST00000558264 SEMG1P04279 462 aa10.08□□□□□ -0.8
TPM1-210ENST00000558264 CEACAM5P06731 702 aa10.08□□□□□ -0.8
TPM1-210ENST00000558264 NR4A1P22736 598 aa10.08□□□□□ -0.8
TPM1-210ENST00000558264 CRHBPP24387 322 aa10.08□□□□□ -0.8
TPM1-210ENST00000558264 RRM2P31350 389 aa10.08□□□□□ -0.8
TPM1-210ENST00000558264 SLC19A1P41440 591 aa10.08□□□□□ -0.8
TPM1-210ENST00000558264 HLCSP50747 726 aa10.08□□□□□ -0.8
TPM1-210ENST00000558264 CDK9P50750 372 aaKnown RBP10.08□□□□□ -0.8
TPM1-210ENST00000558264 CCR8P51685 355 aa10.08□□□□□ -0.8
TPM1-210ENST00000558264 PDE7AQ13946 482 aa10.08□□□□□ -0.8
TPM1-210ENST00000558264 SCARB2Q14108 478 aa10.08□□□□□ -0.8
TPM1-210ENST00000558264 ZFAND2BQ8WV99 257 aa10.08□□□□□ -0.8
TPM1-210ENST00000558264 SMPDL3AQ92484 453 aa10.08□□□□□ -0.8
TPM1-210ENST00000558264 C12orf43Q96C57 262 aaKnown RBP10.08□□□□□ -0.8
TPM1-210ENST00000558264 MRPL38Q96DV4 380 aaKnown RBP10.08□□□□□ -0.8
TPM1-210ENST00000558264 METTL2AQ96IZ6 378 aaKnown RBP10.08□□□□□ -0.8
TPM1-210ENST00000558264 C17orf62Q9BQA9 187 aa10.08□□□□□ -0.8
TPM1-210ENST00000558264 OCEL1Q9H607 264 aa10.08□□□□□ -0.8
TPM1-210ENST00000558264 TM9SF3Q9HD45 589 aa10.08□□□□□ -0.8
TPM1-210ENST00000558264 PAK1IP1Q9NWT1 392 aaPredicted RBP10.08□□□□□ -0.8
TPM1-210ENST00000558264 TAS2R9Q9NYW1 312 aa10.08□□□□□ -0.8
TPM1-210ENST00000558264 SCHIP1Q9P0W5 487 aaPredicted RBP10.08□□□□□ -0.8
TPM1-210ENST00000558264 POM121BA6NF01 834 aa10.08□□□□□ -0.8
TPM1-210ENST00000558264 TRIM64A6NGJ6 449 aa10.08□□□□□ -0.8
TPM1-210ENST00000558264 M0QX08 132 aa10.08□□□□□ -0.8
TPM1-210ENST00000558264 KLF8O95600 359 aaPredicted RBP10.08□□□□□ -0.8
TPM1-210ENST00000558264 DNTTP04053 509 aa10.08□□□□□ -0.8
TPM1-210ENST00000558264 ALPPL2P10696 532 aa10.08□□□□□ -0.8
TPM1-210ENST00000558264 TRIM23P36406 574 aa10.08□□□□□ -0.8
TPM1-210ENST00000558264 CCR3P51677 355 aa10.08□□□□□ -0.8
TPM1-210ENST00000558264 ADPRHP54922 357 aa10.08□□□□□ -0.8
TPM1-210ENST00000558264 SMN1Q16637 294 aaKnown RBP10.08□□□□□ -0.8
TPM1-210ENST00000558264 ZBED5Q49AG3 693 aa10.08□□□□□ -0.8
TPM1-210ENST00000558264 C6orf141Q5SZD1 244 aa10.08□□□□□ -0.8
TPM1-210ENST00000558264 GCNT6Q5T4J0 391 aa10.08□□□□□ -0.8
TPM1-210ENST00000558264 DEPDC1Q5TB30 811 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms