RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 ST6GALNAC3Q8NDV1 305 aa5.47□□□□□ -1.53
RTF1-204ENST00000558117 LILRB1Q8NHL6 650 aaPredicted RBP5.47□□□□□ -1.53
RTF1-204ENST00000558117 TMEM158Q8WZ71 300 aa5.47□□□□□ -1.53
RTF1-204ENST00000558117 NRGNQ92686 78 aa5.47□□□□□ -1.53
RTF1-204ENST00000558117 PNPLA2Q96AD5 504 aa5.47□□□□□ -1.53
RTF1-204ENST00000558117 KIAA1143Q96AT1 154 aaPredicted RBP5.47□□□□□ -1.53
RTF1-204ENST00000558117 SPATA17Q96L03 361 aa5.47□□□□□ -1.53
RTF1-204ENST00000558117 PIP5K1AQ99755 562 aa5.47□□□□□ -1.53
RTF1-204ENST00000558117 HAUS8Q9BT25 410 aa5.47□□□□□ -1.53
RTF1-204ENST00000558117 SPRY4Q9C004 299 aa5.47□□□□□ -1.53
RTF1-204ENST00000558117 C6orf50Q9HD87 102 aa5.47□□□□□ -1.53
RTF1-204ENST00000558117 MRPL40Q9NQ50 206 aaKnown RBP5.47□□□□□ -1.53
RTF1-204ENST00000558117 PILRAQ9UKJ1 303 aa5.47□□□□□ -1.53
RTF1-204ENST00000558117 MRPS18BQ9Y676 258 aaKnown RBP5.47□□□□□ -1.53
RTF1-204ENST00000558117 CEPT1Q9Y6K0 416 aa5.47□□□□□ -1.53
RTF1-204ENST00000558117 CNTRLQ7Z7A1 2325 aa5.46□□□□□ -1.54
RTF1-204ENST00000558117 PRAMEF26H0Y7S4 382 aa5.46□□□□□ -1.54
RTF1-204ENST00000558117 SOCS6O14544 535 aa5.46□□□□□ -1.54
RTF1-204ENST00000558117 CYB561D2O14569 222 aa5.46□□□□□ -1.54
RTF1-204ENST00000558117 MID1O15344 667 aa5.46□□□□□ -1.54
RTF1-204ENST00000558117 LRCH4O75427 683 aa5.46□□□□□ -1.54
RTF1-204ENST00000558117 MLYCDO95822 493 aa5.46□□□□□ -1.54
RTF1-204ENST00000558117 PENKP01210 267 aaPredicted RBP5.46□□□□□ -1.54
RTF1-204ENST00000558117 STSP08842 583 aa5.46□□□□□ -1.54
RTF1-204ENST00000558117 MCF2P10911 925 aa5.46□□□□□ -1.54
RTF1-204ENST00000558117 PORP16435 677 aaPredicted RBP5.46□□□□□ -1.54
RTF1-204ENST00000558117 IL11P20809 199 aa5.46□□□□□ -1.54
RTF1-204ENST00000558117 CDAP32320 146 aa5.46□□□□□ -1.54
RTF1-204ENST00000558117 STX2P32856 288 aa5.46□□□□□ -1.54
RTF1-204ENST00000558117 NUDT1P36639 197 aa5.46□□□□□ -1.54
RTF1-204ENST00000558117 ARL1P40616 181 aaPredicted RBP5.46□□□□□ -1.54
RTF1-204ENST00000558117 CCR9P51686 369 aa5.46□□□□□ -1.54
RTF1-204ENST00000558117 EIF3BP55884 814 aaKnown RBP5.46□□□□□ -1.54
RTF1-204ENST00000558117 FOXM1Q08050 763 aa5.46□□□□□ -1.54
RTF1-204ENST00000558117 SNTA1Q13424 505 aa5.46□□□□□ -1.54
RTF1-204ENST00000558117 DCTN2Q13561 401 aaKnown RBP5.46□□□□□ -1.54
RTF1-204ENST00000558117 NAE1Q13564 534 aa5.46□□□□□ -1.54
RTF1-204ENST00000558117 SF3B4Q15427 424 aaKnown RBP eCLIP5.46□□□□□ -1.542e-6■□□□□ 9.8
RTF1-204ENST00000558117 AMZ1Q400G9 498 aa5.46□□□□□ -1.54
RTF1-204ENST00000558117 PDLIM3Q53GG5 364 aaPredicted RBP5.46□□□□□ -1.54
RTF1-204ENST00000558117 CDC73Q6P1J9 531 aa5.46□□□□□ -1.54
RTF1-204ENST00000558117 PLBD1Q6P4A8 553 aa5.46□□□□□ -1.54
RTF1-204ENST00000558117 MYO7BQ6PIF6 2116 aa5.46□□□□□ -1.54
RTF1-204ENST00000558117 DENND5BQ6ZUT9 1274 aa5.46□□□□□ -1.54
RTF1-204ENST00000558117 TMEM135Q86UB9 458 aa5.46□□□□□ -1.54
RTF1-204ENST00000558117 METTL23Q86XA0 190 aa5.46□□□□□ -1.54
RTF1-204ENST00000558117 VSIG1Q86XK7 387 aa5.46□□□□□ -1.54
RTF1-204ENST00000558117 SLC22A18ASQ8N1D0 253 aa5.46□□□□□ -1.54
RTF1-204ENST00000558117 ACBD4Q8NC06 268 aa5.46□□□□□ -1.54
RTF1-204ENST00000558117 GTF3C6Q969F1 213 aa5.46□□□□□ -1.54
RTF1-204ENST00000558117 KIFC3Q9BVG8 833 aa5.46□□□□□ -1.54
RTF1-204ENST00000558117 ZMYND12Q9H0C1 365 aa5.46□□□□□ -1.54
RTF1-204ENST00000558117 LRRN3Q9H3W5 708 aa5.46□□□□□ -1.54
RTF1-204ENST00000558117 CNGB3Q9NQW8 809 aa5.46□□□□□ -1.54
RTF1-204ENST00000558117 ARGLU1Q9NWB6 273 aaPredicted RBP5.46□□□□□ -1.54
RTF1-204ENST00000558117 MALT1Q9UDY8 824 aa5.46□□□□□ -1.54
RTF1-204ENST00000558117 CYTH4Q9UIA0 394 aa5.46□□□□□ -1.54
RTF1-204ENST00000558117 TINAGQ9UJW2 476 aa5.46□□□□□ -1.54
RTF1-204ENST00000558117 CLEC4EQ9ULY5 219 aa5.46□□□□□ -1.54
RTF1-204ENST00000558117 UBQLN1Q9UMX0 589 aaKnown RBP5.46□□□□□ -1.54
RTF1-204ENST00000558117 SNX5Q9Y5X3 404 aa5.46□□□□□ -1.54
RTF1-204ENST00000558117 A0A1B0GUH1 482 aa5.45□□□□□ -1.54
RTF1-204ENST00000558117 TTC26A0AVF1 554 aa5.45□□□□□ -1.54
RTF1-204ENST00000558117 PIRO00625 290 aa5.45□□□□□ -1.54
RTF1-204ENST00000558117 AQP9O43315 295 aa5.45□□□□□ -1.54
RTF1-204ENST00000558117 GAGE7O76087 117 aa5.45□□□□□ -1.54
RTF1-204ENST00000558117 SLITRK3O94933 977 aa5.45□□□□□ -1.54
RTF1-204ENST00000558117 LYPLA2O95372 231 aa5.45□□□□□ -1.54
RTF1-204ENST00000558117 CLDN14O95500 239 aa5.45□□□□□ -1.54
RTF1-204ENST00000558117 TDP2O95551 362 aa5.45□□□□□ -1.54
RTF1-204ENST00000558117 CSF2P04141 144 aa5.45□□□□□ -1.54
RTF1-204ENST00000558117 GAGE12FP0CL80 117 aa5.45□□□□□ -1.54
RTF1-204ENST00000558117 GAGE12GP0CL81 117 aa5.45□□□□□ -1.54
RTF1-204ENST00000558117 GAGE12IP0CL82 117 aa5.45□□□□□ -1.54
RTF1-204ENST00000558117 F8A1P23610 371 aa5.45□□□□□ -1.54
RTF1-204ENST00000558117 NFKBIAP25963 317 aa5.45□□□□□ -1.54
RTF1-204ENST00000558117 MAT2AP31153 395 aaKnown RBP5.45□□□□□ -1.54
RTF1-204ENST00000558117 MAGEA11P43364 429 aa5.45□□□□□ -1.54
RTF1-204ENST00000558117 NAMPTP43490 491 aa5.45□□□□□ -1.54
RTF1-204ENST00000558117 RABIFP47224 123 aa5.45□□□□□ -1.54
RTF1-204ENST00000558117 ECT2LQ008S8 904 aa5.45□□□□□ -1.54
RTF1-204ENST00000558117 PLIN5Q00G26 463 aa5.45□□□□□ -1.54
RTF1-204ENST00000558117 POU3F1Q03052 451 aaPredicted RBP5.45□□□□□ -1.54
RTF1-204ENST00000558117 EEF1A2Q05639 463 aaKnown RBP5.45□□□□□ -1.54
RTF1-204ENST00000558117 TMEM115Q12893 351 aaPredicted RBP5.45□□□□□ -1.54
RTF1-204ENST00000558117 DLG1Q12959 904 aa5.45□□□□□ -1.54
RTF1-204ENST00000558117 TAF10Q12962 218 aa5.45□□□□□ -1.54
RTF1-204ENST00000558117 TRDNQ13061 729 aa5.45□□□□□ -1.54
RTF1-204ENST00000558117 GAGE1Q13065 139 aa5.45□□□□□ -1.54
RTF1-204ENST00000558117 GAGE4Q13068 117 aa5.45□□□□□ -1.54
RTF1-204ENST00000558117 GALNT13Q8IUC8 556 aa5.45□□□□□ -1.54
RTF1-204ENST00000558117 IQCKQ8N0W5 287 aa5.45□□□□□ -1.54
RTF1-204ENST00000558117 SPATA6LQ8N4H0 392 aa5.45□□□□□ -1.54
RTF1-204ENST00000558117 PERPQ96FX8 193 aa5.45□□□□□ -1.54
RTF1-204ENST00000558117 FEM1CQ96JP0 617 aa5.45□□□□□ -1.54
RTF1-204ENST00000558117 SLC41A2Q96JW4 573 aa5.45□□□□□ -1.54
RTF1-204ENST00000558117 CEP295NLQ96MC4 621 aa5.45□□□□□ -1.54
RTF1-204ENST00000558117 FAM110AQ9BQ89 295 aa5.45□□□□□ -1.54
RTF1-204ENST00000558117 TCHPQ9BT92 498 aa5.45□□□□□ -1.54
RTF1-204ENST00000558117 SLC25A23Q9BV35 468 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms