RNA–Protein interactions for RNA: ENST00000555616.5

ACTN1-215, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 919 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-215ENST00000555616 CXCR2P25025 360 aa9.14□□□□□ -0.95
ACTN1-215ENST00000555616 HMOX2P30519 316 aa9.14□□□□□ -0.95
ACTN1-215ENST00000555616 ARRB2P32121 409 aa9.14□□□□□ -0.95
ACTN1-215ENST00000555616 HNF4AP41235 474 aa9.14□□□□□ -0.95
ACTN1-215ENST00000555616 CCR8P51685 355 aa9.14□□□□□ -0.95
ACTN1-215ENST00000555616 PGDP52209 483 aa9.14□□□□□ -0.95
ACTN1-215ENST00000555616 FOXL2P58012 376 aa9.14□□□□□ -0.95
ACTN1-215ENST00000555616 PCDH1Q08174 1060 aa9.14□□□□□ -0.95
ACTN1-215ENST00000555616 KLRB1Q12918 225 aa9.14□□□□□ -0.95
ACTN1-215ENST00000555616 CHIT1Q13231 466 aa9.14□□□□□ -0.95
ACTN1-215ENST00000555616 LAPTM5Q13571 262 aa9.14□□□□□ -0.95
ACTN1-215ENST00000555616 DSG2Q14126 1118 aa9.14□□□□□ -0.95
ACTN1-215ENST00000555616 TBCCQ15814 346 aa9.14□□□□□ -0.95
ACTN1-215ENST00000555616 NKG7Q16617 165 aa9.14□□□□□ -0.95
ACTN1-215ENST00000555616 MUM1Q2TAK8 710 aa9.14□□□□□ -0.95
ACTN1-215ENST00000555616 GGTA1PQ4G0N0 100 aa9.14□□□□□ -0.95
ACTN1-215ENST00000555616 DCAF10Q5QP82 559 aa9.14□□□□□ -0.95
ACTN1-215ENST00000555616 GARNL3Q5VVW2 1013 aa9.14□□□□□ -0.95
ACTN1-215ENST00000555616 LIPJQ5W064 366 aa9.14□□□□□ -0.95
ACTN1-215ENST00000555616 ZNF771Q7L3S4 317 aaPredicted RBP9.14□□□□□ -0.95
ACTN1-215ENST00000555616 TMPRSS11BQ86T26 416 aa9.14□□□□□ -0.95
ACTN1-215ENST00000555616 TMEM151BQ8IW70 566 aa9.14□□□□□ -0.95
ACTN1-215ENST00000555616 CLYBLQ8N0X4 340 aa9.14□□□□□ -0.95
ACTN1-215ENST00000555616 DTWD1Q8N5C7 304 aa9.14□□□□□ -0.95
ACTN1-215ENST00000555616 TBC1D19Q8N5T2 526 aa9.14□□□□□ -0.95
ACTN1-215ENST00000555616 OR4F6Q8NGB9 312 aa9.14□□□□□ -0.95
ACTN1-215ENST00000555616 OR52B6Q8NGF0 335 aa9.14□□□□□ -0.95
ACTN1-215ENST00000555616 METTL6Q8TCB7 284 aa9.14□□□□□ -0.95
ACTN1-215ENST00000555616 AGR3Q8TD06 166 aa9.14□□□□□ -0.95
ACTN1-215ENST00000555616 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.14□□□□□ -0.95
ACTN1-215ENST00000555616 NEIL2Q969S2 332 aa9.14□□□□□ -0.95
ACTN1-215ENST00000555616 UBE2E3Q969T4 207 aa9.14□□□□□ -0.95
ACTN1-215ENST00000555616 REPS1Q96D71 796 aa9.14□□□□□ -0.95
ACTN1-215ENST00000555616 OR4K3Q96R72 315 aa9.14□□□□□ -0.95
ACTN1-215ENST00000555616 EFCAB11Q9BUY7 163 aa9.14□□□□□ -0.95
ACTN1-215ENST00000555616 SLC25A23Q9BV35 468 aa9.14□□□□□ -0.95
ACTN1-215ENST00000555616 C20orf27Q9GZN8 174 aa9.14□□□□□ -0.95
ACTN1-215ENST00000555616 ZNF395Q9H8N7 513 aaPredicted RBP9.14□□□□□ -0.95
ACTN1-215ENST00000555616 PELI2Q9HAT8 420 aa9.14□□□□□ -0.95
ACTN1-215ENST00000555616 P4HTMQ9NXG6 502 aa9.14□□□□□ -0.95
ACTN1-215ENST00000555616 MARCOQ9UEW3 520 aaPredicted RBP9.14□□□□□ -0.95
ACTN1-215ENST00000555616 TRPS1Q9UHF7 1281 aa9.14□□□□□ -0.95
ACTN1-215ENST00000555616 RUVBL1Q9Y265 456 aaKnown RBP9.14□□□□□ -0.95
ACTN1-215ENST00000555616 TRAF6Q9Y4K3 522 aa9.14□□□□□ -0.95
ACTN1-215ENST00000555616 PCDHGB7Q9Y5F8 929 aa9.14□□□□□ -0.95
ACTN1-215ENST00000555616 SPTBP11277 2137 aa9.14□□□□□ -0.95
ACTN1-215ENST00000555616 IGLV3-12A0A075B6K2 115 aa9.13□□□□□ -0.95
ACTN1-215ENST00000555616 KCNE1BA0A087WTH5 132 aa9.13□□□□□ -0.95
ACTN1-215ENST00000555616 TRPC5OSA6NMA1 111 aa9.13□□□□□ -0.95
ACTN1-215ENST00000555616 PPP6CO00743 305 aa9.13□□□□□ -0.95
ACTN1-215ENST00000555616 TXNDC9O14530 226 aa9.13□□□□□ -0.95
ACTN1-215ENST00000555616 HDAC3O15379 428 aa9.13□□□□□ -0.95
ACTN1-215ENST00000555616 P2RX6O15547 441 aa9.13□□□□□ -0.95
ACTN1-215ENST00000555616 OR4F21O95013 312 aa9.13□□□□□ -0.95
ACTN1-215ENST00000555616 KRT6AP02538 564 aa9.13□□□□□ -0.95
ACTN1-215ENST00000555616 KRT6BP04259 564 aa9.13□□□□□ -0.95
ACTN1-215ENST00000555616 EIF2S1P05198 315 aaKnown RBP9.13□□□□□ -0.95
ACTN1-215ENST00000555616 C1GALT1C1LP0DN25 315 aa9.13□□□□□ -0.95
ACTN1-215ENST00000555616 KITP10721 976 aa9.13□□□□□ -0.95
ACTN1-215ENST00000555616 CDH1P12830 882 aa9.13□□□□□ -0.95
ACTN1-215ENST00000555616 MMP11P24347 488 aa9.13□□□□□ -0.95
ACTN1-215ENST00000555616 GRK3P35626 688 aa9.13□□□□□ -0.95
ACTN1-215ENST00000555616 CASP2P42575 452 aa9.13□□□□□ -0.95
ACTN1-215ENST00000555616 OR1D4P47884 311 aa9.13□□□□□ -0.95
ACTN1-215ENST00000555616 KRT6CP48668 564 aa9.13□□□□□ -0.95
ACTN1-215ENST00000555616 CCL11P51671 97 aa9.13□□□□□ -0.95
ACTN1-215ENST00000555616 RPS15AP62244 130 aaKnown RBP9.13□□□□□ -0.95
ACTN1-215ENST00000555616 CSNK1G2P78368 415 aa9.13□□□□□ -0.95
ACTN1-215ENST00000555616 TLE1Q04724 770 aa9.13□□□□□ -0.95
ACTN1-215ENST00000555616 IFT88Q13099 833 aa9.13□□□□□ -0.95
ACTN1-215ENST00000555616 DOC2AQ14183 400 aa9.13□□□□□ -0.95
ACTN1-215ENST00000555616 HIST2H2ACQ16777 129 aaPredicted RBP9.13□□□□□ -0.95
ACTN1-215ENST00000555616 HKDC1Q2TB90 917 aa9.13□□□□□ -0.95
ACTN1-215ENST00000555616 C10orf62Q5T681 223 aaPredicted RBP9.13□□□□□ -0.95
ACTN1-215ENST00000555616 KANK2Q63ZY3 851 aa9.13□□□□□ -0.95
ACTN1-215ENST00000555616 ATG9BQ674R7 924 aa9.13□□□□□ -0.95
ACTN1-215ENST00000555616 HIST2H2AA3Q6FI13 130 aa9.13□□□□□ -0.95
ACTN1-215ENST00000555616 LETMD1Q6P1Q0 360 aa9.13□□□□□ -0.95
ACTN1-215ENST00000555616 NXPE4Q6UWF7 544 aa9.13□□□□□ -0.95
ACTN1-215ENST00000555616 SLCO4C1Q6ZQN7 724 aa9.13□□□□□ -0.95
ACTN1-215ENST00000555616 VN1R4Q7Z5H5 301 aa9.13□□□□□ -0.95
ACTN1-215ENST00000555616 ADCK2Q7Z695 626 aa9.13□□□□□ -0.95
ACTN1-215ENST00000555616 KRT78Q8N1N4 520 aa9.13□□□□□ -0.95
ACTN1-215ENST00000555616 METTL27Q8N6F8 245 aaPredicted RBP9.13□□□□□ -0.95
ACTN1-215ENST00000555616 CDYL2Q8N8U2 506 aa9.13□□□□□ -0.95
ACTN1-215ENST00000555616 L3MBTL4Q8NA19 623 aa9.13□□□□□ -0.95
ACTN1-215ENST00000555616 ZNF473Q8WTR7 871 aaKnown RBP9.13□□□□□ -0.95
ACTN1-215ENST00000555616 CCT6BQ92526 530 aa9.13□□□□□ -0.95
ACTN1-215ENST00000555616 RERGQ96A58 199 aaPredicted RBP9.13□□□□□ -0.95
ACTN1-215ENST00000555616 WDR34Q96EX3 536 aa9.13□□□□□ -0.95
ACTN1-215ENST00000555616 PTCD3Q96EY7 689 aaKnown RBP9.13□□□□□ -0.95
ACTN1-215ENST00000555616 FER1L6-AS2Q96M78 137 aa9.13□□□□□ -0.95
ACTN1-215ENST00000555616 CDK15Q96Q40 435 aa9.13□□□□□ -0.95
ACTN1-215ENST00000555616 CCT7Q99832 543 aa9.13□□□□□ -0.95
ACTN1-215ENST00000555616 AIF1LQ9BQI0 150 aa9.13□□□□□ -0.95
ACTN1-215ENST00000555616 TRIM4Q9C037 500 aa9.13□□□□□ -0.95
ACTN1-215ENST00000555616 PITHD1Q9GZP4 211 aaPredicted RBP9.13□□□□□ -0.95
ACTN1-215ENST00000555616 ELOVL6Q9H5J4 265 aa9.13□□□□□ -0.95
ACTN1-215ENST00000555616 ZNF304Q9HCX3 659 aa9.13□□□□□ -0.95
ACTN1-215ENST00000555616 PRM3Q9NNZ6 103 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms