RNA–Protein interactions for RNA: ENST00000552208.1

LSM6P2-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM6P2, Length 177 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P2-201ENST00000552208 RAB39BQ96DA2 213 aa3.63□□□□□ -1.83
LSM6P2-201ENST00000552208 RTP4Q96DX8 246 aa3.63□□□□□ -1.83
LSM6P2-201ENST00000552208 ZNF48Q96MX3 618 aaPredicted RBP3.63□□□□□ -1.83
LSM6P2-201ENST00000552208 S1PR3Q99500 378 aa3.63□□□□□ -1.83
LSM6P2-201ENST00000552208 SSX3Q99909 188 aa3.63□□□□□ -1.83
LSM6P2-201ENST00000552208 CBWD1Q9BRT8 395 aa3.63□□□□□ -1.83
LSM6P2-201ENST00000552208 ERP44Q9BS26 406 aa3.63□□□□□ -1.83
LSM6P2-201ENST00000552208 DDX31Q9H8H2 851 aaKnown RBP3.63□□□□□ -1.83
LSM6P2-201ENST00000552208 HOMER3Q9NSC5 361 aa3.63□□□□□ -1.83
LSM6P2-201ENST00000552208 CENPMQ9NSP4 180 aa3.63□□□□□ -1.83
LSM6P2-201ENST00000552208 AATFQ9NY61 560 aaKnown RBP eCLIP3.63□□□□□ -1.83
LSM6P2-201ENST00000552208 COPS7AQ9UBW8 275 aa3.63□□□□□ -1.83
LSM6P2-201ENST00000552208 EPHA6Q9UF33 1036 aa3.63□□□□□ -1.83
LSM6P2-201ENST00000552208 NARFQ9UHQ1 456 aa3.63□□□□□ -1.83
LSM6P2-201ENST00000552208 LAMP5Q9UJQ1 280 aa3.63□□□□□ -1.83
LSM6P2-201ENST00000552208 PRDM4Q9UKN5 801 aa3.63□□□□□ -1.83
LSM6P2-201ENST00000552208 RABL2BQ9UNT1 228 aa3.63□□□□□ -1.83
LSM6P2-201ENST00000552208 ETV7Q9Y603 341 aa3.63□□□□□ -1.83
LSM6P2-201ENST00000552208 KIAA1217Q5T5P2 1943 aa3.63□□□□□ -1.83
LSM6P2-201ENST00000552208 UMODL1Q5DID0 1318 aa3.63□□□□□ -1.83
LSM6P2-201ENST00000552208 CHEK1O14757 476 aa3.62□□□□□ -1.83
LSM6P2-201ENST00000552208 OGTO15294 1046 aa3.62□□□□□ -1.83
LSM6P2-201ENST00000552208 P2RX6O15547 441 aa3.62□□□□□ -1.83
LSM6P2-201ENST00000552208 HMMRO75330 724 aa3.62□□□□□ -1.83
LSM6P2-201ENST00000552208 SCGB2A1O75556 95 aa3.62□□□□□ -1.83
LSM6P2-201ENST00000552208 UMODP07911 640 aa3.62□□□□□ -1.83
LSM6P2-201ENST00000552208 SCP2P22307 547 aa3.62□□□□□ -1.83
LSM6P2-201ENST00000552208 PTPN4P29074 926 aa3.62□□□□□ -1.83
LSM6P2-201ENST00000552208 CDC25AP30304 524 aa3.62□□□□□ -1.83
LSM6P2-201ENST00000552208 STIP1P31948 543 aaKnown RBP3.62□□□□□ -1.83
LSM6P2-201ENST00000552208 SLC6A8P48029 635 aa3.62□□□□□ -1.83
LSM6P2-201ENST00000552208 DNA2P51530 1060 aa3.62□□□□□ -1.83
LSM6P2-201ENST00000552208 RAPSNQ13702 412 aa3.62□□□□□ -1.83
LSM6P2-201ENST00000552208 CEACAM7Q14002 265 aa3.62□□□□□ -1.83
LSM6P2-201ENST00000552208 GRB14Q14449 540 aa3.62□□□□□ -1.83
LSM6P2-201ENST00000552208 TECRLQ5HYJ1 363 aa3.62□□□□□ -1.83
LSM6P2-201ENST00000552208 LDLRAP1Q5SW96 308 aa3.62□□□□□ -1.83
LSM6P2-201ENST00000552208 WBP2NLQ6ICG8 309 aa3.62□□□□□ -1.83
LSM6P2-201ENST00000552208 C9orf47Q6ZRZ4 202 aa3.62□□□□□ -1.83
LSM6P2-201ENST00000552208 C15orf52Q6ZUT6 534 aaKnown RBP3.62□□□□□ -1.83
LSM6P2-201ENST00000552208 G2E3Q7L622 706 aa3.62□□□□□ -1.83
LSM6P2-201ENST00000552208 TRMT1LQ7Z2T5 733 aaKnown RBP3.62□□□□□ -1.83
LSM6P2-201ENST00000552208 C16orf82Q7Z2V1 217 aa3.62□□□□□ -1.83
LSM6P2-201ENST00000552208 PIGZQ86VD9 579 aa3.62□□□□□ -1.83
LSM6P2-201ENST00000552208 FAM133AQ8N9E0 248 aa3.62□□□□□ -1.83
LSM6P2-201ENST00000552208 BANPQ8N9N5 519 aa3.62□□□□□ -1.83
LSM6P2-201ENST00000552208 OR4C15Q8NGM1 316 aa3.62□□□□□ -1.83
LSM6P2-201ENST00000552208 OR13C3Q8NGS6 347 aa3.62□□□□□ -1.83
LSM6P2-201ENST00000552208 OR4L1Q8NH43 312 aa3.62□□□□□ -1.83
LSM6P2-201ENST00000552208 SELENOMQ8WWX9 145 aa3.62□□□□□ -1.83
LSM6P2-201ENST00000552208 SLC35C1Q96A29 364 aa3.62□□□□□ -1.83
LSM6P2-201ENST00000552208 BPIFA2Q96DR5 249 aa3.62□□□□□ -1.83
LSM6P2-201ENST00000552208 CCDC51Q96ER9 411 aa3.62□□□□□ -1.83
LSM6P2-201ENST00000552208 LMLNQ96KR4 655 aa3.62□□□□□ -1.83
LSM6P2-201ENST00000552208 PCDHB18PQ96TA0 734 aa3.62□□□□□ -1.83
LSM6P2-201ENST00000552208 GPA33Q99795 319 aa3.62□□□□□ -1.83
LSM6P2-201ENST00000552208 RHNO1Q9BSD3 238 aa3.62□□□□□ -1.83
LSM6P2-201ENST00000552208 CARD6Q9BX69 1037 aa3.62□□□□□ -1.83
LSM6P2-201ENST00000552208 RIBC2Q9H4K1 309 aa3.62□□□□□ -1.83
LSM6P2-201ENST00000552208 TFB2MQ9H5Q4 396 aaKnown RBP3.62□□□□□ -1.83
LSM6P2-201ENST00000552208 TMEM231Q9H6L2 316 aa3.62□□□□□ -1.83
LSM6P2-201ENST00000552208 MARCH7Q9H992 704 aa3.62□□□□□ -1.83
LSM6P2-201ENST00000552208 ROPN1Q9HAT0 212 aaPredicted RBP3.62□□□□□ -1.83
LSM6P2-201ENST00000552208 TBC1D13Q9NVG8 400 aa3.62□□□□□ -1.83
LSM6P2-201ENST00000552208 FLRT3Q9NZU0 649 aa3.62□□□□□ -1.83
LSM6P2-201ENST00000552208 ATXN10Q9UBB4 475 aa3.62□□□□□ -1.83
LSM6P2-201ENST00000552208 TEKT2Q9UIF3 430 aa3.62□□□□□ -1.83
LSM6P2-201ENST00000552208 ELF5Q9UKW6 265 aaPredicted RBP3.62□□□□□ -1.83
LSM6P2-201ENST00000552208 SATB2Q9UPW6 733 aa3.62□□□□□ -1.83
LSM6P2-201ENST00000552208 NCKAP1Q9Y2A7 1128 aa3.62□□□□□ -1.83
LSM6P2-201ENST00000552208 RRP15Q9Y3B9 282 aaKnown RBP3.62□□□□□ -1.83
LSM6P2-201ENST00000552208 ZNF521Q96K83 1311 aa3.62□□□□□ -1.83
LSM6P2-201ENST00000552208 SAA2-SAA4A0A096LPE2 208 aa3.61□□□□□ -1.83
LSM6P2-201ENST00000552208 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.61□□□□□ -1.83
LSM6P2-201ENST00000552208 TRIM49BA6NDI0 452 aa3.61□□□□□ -1.83
LSM6P2-201ENST00000552208 SNURFLB1AK76 121 aa3.61□□□□□ -1.83
LSM6P2-201ENST00000552208 PRAC2D3DTV9 90 aa3.61□□□□□ -1.83
LSM6P2-201ENST00000552208 EEF2KO00418 725 aaKnown RBP3.61□□□□□ -1.83
LSM6P2-201ENST00000552208 GRID2O43424 1007 aa3.61□□□□□ -1.83
LSM6P2-201ENST00000552208 SAP30O75446 220 aa3.61□□□□□ -1.83
LSM6P2-201ENST00000552208 OAZ2O95190 189 aa3.61□□□□□ -1.83
LSM6P2-201ENST00000552208 NR3C1P04150 777 aa3.61□□□□□ -1.83
LSM6P2-201ENST00000552208 GPIP06744 558 aa3.61□□□□□ -1.83
LSM6P2-201ENST00000552208 KRT13P13646 458 aa3.61□□□□□ -1.83
LSM6P2-201ENST00000552208 IL4RP24394 825 aa3.61□□□□□ -1.83
LSM6P2-201ENST00000552208 CYP2F1P24903 491 aa3.61□□□□□ -1.83
LSM6P2-201ENST00000552208 ACKR3P25106 362 aa3.61□□□□□ -1.83
LSM6P2-201ENST00000552208 DCTP40126 519 aa3.61□□□□□ -1.83
LSM6P2-201ENST00000552208 PRPHP41219 470 aa3.61□□□□□ -1.83
LSM6P2-201ENST00000552208 TRPC1P48995 793 aa3.61□□□□□ -1.83
LSM6P2-201ENST00000552208 NUMBP49757 651 aa3.61□□□□□ -1.83
LSM6P2-201ENST00000552208 KCNK10P57789 538 aa3.61□□□□□ -1.83
LSM6P2-201ENST00000552208 DSCR9P59020 149 aa3.61□□□□□ -1.83
LSM6P2-201ENST00000552208 NLRP11P59045 1033 aaKnown RBP3.61□□□□□ -1.83
LSM6P2-201ENST00000552208 LINC00205P59089 165 aa3.61□□□□□ -1.83
LSM6P2-201ENST00000552208 MYL7Q01449 175 aa3.61□□□□□ -1.83
LSM6P2-201ENST00000552208 OVGP1Q12889 678 aa3.61□□□□□ -1.83
LSM6P2-201ENST00000552208 SGCGQ13326 291 aa3.61□□□□□ -1.83
LSM6P2-201ENST00000552208 SNX1Q13596 522 aa3.61□□□□□ -1.83
LSM6P2-201ENST00000552208 ITGA9Q13797 1035 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms