RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 PPTC7Q8NI37 304 aa12.37□□□□□ -0.43
PTCH1-212ENST00000546744 HMCESQ96FZ2 354 aa12.37□□□□□ -0.43
PTCH1-212ENST00000546744 DHRS1Q96LJ7 313 aa12.37□□□□□ -0.43
PTCH1-212ENST00000546744 NECAB3Q96P71 396 aaPredicted RBP12.37□□□□□ -0.43
PTCH1-212ENST00000546744 RGCCQ9H4X1 137 aa12.37□□□□□ -0.43
PTCH1-212ENST00000546744 ELAC1Q9H777 363 aaKnown RBP12.37□□□□□ -0.43
PTCH1-212ENST00000546744 TMLHEQ9NVH6 421 aa12.37□□□□□ -0.43
PTCH1-212ENST00000546744 FBXL21Q9UKT6 434 aa12.37□□□□□ -0.43
PTCH1-212ENST00000546744 KCNIP3Q9Y2W7 256 aa12.37□□□□□ -0.43
PTCH1-212ENST00000546744 UGT2A1Q9Y4X1 527 aa12.37□□□□□ -0.43
PTCH1-212ENST00000546744 MAST2Q6P0Q8 1798 aa12.37□□□□□ -0.43
PTCH1-212ENST00000546744 FAM170BA6NMN3 283 aa12.37□□□□□ -0.43
PTCH1-212ENST00000546744 HAS3O00219 553 aa12.37□□□□□ -0.43
PTCH1-212ENST00000546744 HLA-DQB2P05538 268 aa12.37□□□□□ -0.43
PTCH1-212ENST00000546744 GRK5P34947 590 aa12.37□□□□□ -0.43
PTCH1-212ENST00000546744 NUDT1P36639 197 aa12.37□□□□□ -0.43
PTCH1-212ENST00000546744 DIO3P55073 304 aa12.37□□□□□ -0.43
PTCH1-212ENST00000546744 MRPS6P82932 125 aaKnown RBP12.37□□□□□ -0.43
PTCH1-212ENST00000546744 FAM46CQ5VWP2 391 aa12.37□□□□□ -0.43
PTCH1-212ENST00000546744 ATAD1Q8NBU5 361 aa12.37□□□□□ -0.43
PTCH1-212ENST00000546744 OR5H6Q8NGV6 325 aa12.37□□□□□ -0.43
PTCH1-212ENST00000546744 PIGKQ92643 395 aa12.37□□□□□ -0.43
PTCH1-212ENST00000546744 DNASE1L2Q92874 299 aa12.37□□□□□ -0.43
PTCH1-212ENST00000546744 GAL3ST3Q96A11 431 aa12.37□□□□□ -0.43
PTCH1-212ENST00000546744 EXOSC8Q96B26 276 aaKnown RBP12.37□□□□□ -0.43
PTCH1-212ENST00000546744 CD180Q99467 661 aa12.37□□□□□ -0.43
PTCH1-212ENST00000546744 GPR20Q99678 358 aa12.37□□□□□ -0.43
PTCH1-212ENST00000546744 EBPLQ9BY08 206 aa12.37□□□□□ -0.43
PTCH1-212ENST00000546744 ZDHHC3Q9NYG2 299 aa12.37□□□□□ -0.43
PTCH1-212ENST00000546744 PCDHB11Q9Y5F2 797 aa12.37□□□□□ -0.43
PTCH1-212ENST00000546744 KLK4Q9Y5K2 254 aa12.37□□□□□ -0.43
PTCH1-212ENST00000546744 TRAV19A0A0A6YYK7 116 aa12.36□□□□□ -0.43
PTCH1-212ENST00000546744 INPPL1O15357 1258 aa12.36□□□□□ -0.43
PTCH1-212ENST00000546744 PEX14O75381 377 aa12.36□□□□□ -0.43
PTCH1-212ENST00000546744 KRT33AO76009 404 aa12.36□□□□□ -0.43
PTCH1-212ENST00000546744 SOX30O94993 753 aa12.36□□□□□ -0.43
PTCH1-212ENST00000546744 IFNA17P01571 189 aa12.36□□□□□ -0.43
PTCH1-212ENST00000546744 STSP08842 583 aa12.36□□□□□ -0.43
PTCH1-212ENST00000546744 FOSL1P15407 271 aa12.36□□□□□ -0.43
PTCH1-212ENST00000546744 CELP19835 753 aa12.36□□□□□ -0.43
PTCH1-212ENST00000546744 PPIGQ13427 754 aaKnown RBP eCLIP12.36□□□□□ -0.43
PTCH1-212ENST00000546744 SERINC3Q13530 473 aa12.36□□□□□ -0.43
PTCH1-212ENST00000546744 CDK10Q15131 360 aa12.36□□□□□ -0.43
PTCH1-212ENST00000546744 IFNLR1Q8IU57 520 aaPredicted RBP12.36□□□□□ -0.43
PTCH1-212ENST00000546744 BEST4Q8NFU0 473 aa12.36□□□□□ -0.43
PTCH1-212ENST00000546744 CNOT9Q92600 299 aaKnown RBP12.36□□□□□ -0.43
PTCH1-212ENST00000546744 FCRL3Q96P31 734 aaPredicted RBP12.36□□□□□ -0.43
PTCH1-212ENST00000546744 PGLYRP2Q96PD5 576 aa12.36□□□□□ -0.43
PTCH1-212ENST00000546744 NELL2Q99435 816 aa12.36□□□□□ -0.43
PTCH1-212ENST00000546744 SYT17Q9BSW7 474 aa12.36□□□□□ -0.43
PTCH1-212ENST00000546744 ATG10Q9H0Y0 220 aa12.36□□□□□ -0.43
PTCH1-212ENST00000546744 PCDH10Q9P2E7 1040 aa12.36□□□□□ -0.43
PTCH1-212ENST00000546744 LOC285095A0A1B0GVY8 99 aa12.36□□□□□ -0.43
PTCH1-212ENST00000546744 MSI1O43347 362 aaKnown RBP12.36□□□□□ -0.43
PTCH1-212ENST00000546744 MSCO60682 206 aa12.36□□□□□ -0.43
PTCH1-212ENST00000546744 ELFN1P0C7U0 828 aa12.36□□□□□ -0.43
PTCH1-212ENST00000546744 ADORA2AP29274 412 aa12.36□□□□□ -0.43
PTCH1-212ENST00000546744 MPIP34949 423 aa12.36□□□□□ -0.43
PTCH1-212ENST00000546744 CPOXP36551 454 aa12.36□□□□□ -0.43
PTCH1-212ENST00000546744 VEZF1Q14119 521 aa12.36□□□□□ -0.43
PTCH1-212ENST00000546744 GPR19Q15760 415 aa12.36□□□□□ -0.43
PTCH1-212ENST00000546744 SLC35G1Q2M3R5 365 aa12.36□□□□□ -0.43
PTCH1-212ENST00000546744 SLC10A6Q3KNW5 377 aa12.36□□□□□ -0.43
PTCH1-212ENST00000546744 SPRED1Q7Z699 444 aa12.36□□□□□ -0.43
PTCH1-212ENST00000546744 SHKBP1Q8TBC3 707 aa12.36□□□□□ -0.43
PTCH1-212ENST00000546744 RAB19A4D1S5 217 aa12.36□□□□□ -0.43
PTCH1-212ENST00000546744 CHRM5P08912 532 aaPredicted RBP12.36□□□□□ -0.43
PTCH1-212ENST00000546744 MLLT3P42568 568 aaPredicted RBP12.36□□□□□ -0.43
PTCH1-212ENST00000546744 CLDN8P56748 225 aa12.36□□□□□ -0.43
PTCH1-212ENST00000546744 GANABQ14697 944 aaKnown RBP12.36□□□□□ -0.43
PTCH1-212ENST00000546744 OXA1LQ15070 435 aa12.36□□□□□ -0.43
PTCH1-212ENST00000546744 UNC50Q53HI1 259 aa12.36□□□□□ -0.43
PTCH1-212ENST00000546744 PRAMEF13Q5VWM6 474 aa12.36□□□□□ -0.43
PTCH1-212ENST00000546744 HS3ST5Q8IZT8 346 aa12.36□□□□□ -0.43
PTCH1-212ENST00000546744 OR56A1Q8NGH5 318 aa12.36□□□□□ -0.43
PTCH1-212ENST00000546744 PLD4Q96BZ4 506 aa12.36□□□□□ -0.43
PTCH1-212ENST00000546744 PYCR2Q96C36 320 aa12.36□□□□□ -0.43
PTCH1-212ENST00000546744 DNAJC27Q9NZQ0 273 aa12.36□□□□□ -0.43
PTCH1-212ENST00000546744 PADI2Q9Y2J8 665 aa12.36□□□□□ -0.43
PTCH1-212ENST00000546744 FZD9O00144 591 aa12.35□□□□□ -0.43
PTCH1-212ENST00000546744 SC5DO75845 299 aa12.35□□□□□ -0.43
PTCH1-212ENST00000546744 GABARAPO95166 117 aa12.35□□□□□ -0.43
PTCH1-212ENST00000546744 NUDT7P0C024 238 aa12.35□□□□□ -0.43
PTCH1-212ENST00000546744 GIMD1P0DJR0 217 aa12.35□□□□□ -0.43
PTCH1-212ENST00000546744 CSNK2A2P19784 350 aaPredicted RBP12.35□□□□□ -0.43
PTCH1-212ENST00000546744 MMP12P39900 470 aa12.35□□□□□ -0.43
PTCH1-212ENST00000546744 OR4D2P58180 307 aa12.35□□□□□ -0.43
PTCH1-212ENST00000546744 LILRA4P59901 499 aa12.35□□□□□ -0.43
PTCH1-212ENST00000546744 LRP8Q14114 963 aa12.35□□□□□ -0.43
PTCH1-212ENST00000546744 VARS2Q5ST30 1063 aaKnown RBP12.35□□□□□ -0.43
PTCH1-212ENST00000546744 SNX29P2Q8IUI4 249 aa12.35□□□□□ -0.43
PTCH1-212ENST00000546744 TRIM43Q96BQ3 446 aaPredicted RBP12.35□□□□□ -0.43
PTCH1-212ENST00000546744 DPYSL5Q9BPU6 564 aa12.35□□□□□ -0.43
PTCH1-212ENST00000546744 RIOK2Q9BVS4 552 aaKnown RBP12.35□□□□□ -0.43
PTCH1-212ENST00000546744 WDR6Q9NNW5 1121 aaKnown RBP12.35□□□□□ -0.43
PTCH1-212ENST00000546744 HEBP1Q9NRV9 189 aa12.35□□□□□ -0.43
PTCH1-212ENST00000546744 THG1LQ9NWX6 298 aaKnown RBP12.35□□□□□ -0.43
PTCH1-212ENST00000546744 ERVK-19Q9WJR5 959 aa12.35□□□□□ -0.43
PTCH1-212ENST00000546744 HSPA12AO43301 675 aa12.35□□□□□ -0.43
PTCH1-212ENST00000546744 EEF1E1O43324 174 aaKnown RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms