RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 RTL3Q8N8U3 475 aaKnown RBP3.58□□□□□ -1.84
SNHG1-224ENST00000545688 SLC4A11Q8NBS3 891 aa3.58□□□□□ -1.84
SNHG1-224ENST00000545688 NSMAFQ92636 917 aa3.58□□□□□ -1.84
SNHG1-224ENST00000545688 APOL6Q9BWW8 343 aa3.58□□□□□ -1.84
SNHG1-224ENST00000545688 RAVER2Q9HCJ3 691 aaKnown RBP3.58□□□□□ -1.84
SNHG1-224ENST00000545688 ABCB10Q9NRK6 738 aa3.58□□□□□ -1.84
SNHG1-224ENST00000545688 TXNDC16Q9P2K2 825 aa3.58□□□□□ -1.84
SNHG1-224ENST00000545688 RPS6KA6Q9UK32 745 aa3.58□□□□□ -1.84
SNHG1-224ENST00000545688 TCRBV21S2A2A0A5A6 115 aa3.57□□□□□ -1.84
SNHG1-224ENST00000545688 AP5Z1O43299 807 aa3.57□□□□□ -1.84
SNHG1-224ENST00000545688 ACEP12821 1306 aa3.57□□□□□ -1.84
SNHG1-224ENST00000545688 USP6P35125 1406 aa3.57□□□□□ -1.84
SNHG1-224ENST00000545688 COL18A1P39060 1754 aa3.57□□□□□ -1.84
SNHG1-224ENST00000545688 KIAA0141Q14154 515 aaPredicted RBP3.57□□□□□ -1.84
SNHG1-224ENST00000545688 BMP2KLQ5H9B9 411 aa3.57□□□□□ -1.84
SNHG1-224ENST00000545688 ATP1A1-AS1Q5TC04 95 aa3.57□□□□□ -1.84
SNHG1-224ENST00000545688 REG3GQ6UW15 175 aa3.57□□□□□ -1.84
SNHG1-224ENST00000545688 ADCK1Q86TW2 530 aa3.57□□□□□ -1.84
SNHG1-224ENST00000545688 FGFRL1Q8N441 504 aa3.57□□□□□ -1.84
SNHG1-224ENST00000545688 GBP7Q8N8V2 638 aaPredicted RBP3.57□□□□□ -1.84
SNHG1-224ENST00000545688 KLHL30-AS1Q8NEE0 82 aa3.57□□□□□ -1.84
SNHG1-224ENST00000545688 SPPL2AQ8TCT8 520 aa3.57□□□□□ -1.84
SNHG1-224ENST00000545688 SSC4DQ8WTU2 575 aa3.57□□□□□ -1.84
SNHG1-224ENST00000545688 SECISBP2LQ93073 1101 aaKnown RBP3.57□□□□□ -1.84
SNHG1-224ENST00000545688 LINC00615Q96LM1 132 aaPredicted RBP3.57□□□□□ -1.84
SNHG1-224ENST00000545688 UBAC1Q9BSL1 405 aa3.57□□□□□ -1.84
SNHG1-224ENST00000545688 CCDC28BQ9BUN5 200 aa3.57□□□□□ -1.84
SNHG1-224ENST00000545688 SDCBP2Q9H190 292 aa3.57□□□□□ -1.84
SNHG1-224ENST00000545688 NSMCE4AQ9NXX6 385 aa3.57□□□□□ -1.84
SNHG1-224ENST00000545688 CELA1Q9UNI1 258 aa3.57□□□□□ -1.84
SNHG1-224ENST00000545688 TRPV2Q9Y5S1 764 aa3.57□□□□□ -1.84
SNHG1-224ENST00000545688 QSER1Q2KHR3 1735 aa3.56□□□□□ -1.84
SNHG1-224ENST00000545688 TRPM1Q7Z4N2 1603 aa3.56□□□□□ -1.84
SNHG1-224ENST00000545688 CICQ96RK0 1608 aaPredicted RBP3.56□□□□□ -1.84
SNHG1-224ENST00000545688 SLIT3O75094 1523 aa3.56□□□□□ -1.84
SNHG1-224ENST00000545688 C10orf71Q711Q0 1435 aa3.56□□□□□ -1.84
SNHG1-224ENST00000545688 RTCAO00442 366 aaKnown RBP3.56□□□□□ -1.84
SNHG1-224ENST00000545688 CLDN4O14493 209 aa3.56□□□□□ -1.84
SNHG1-224ENST00000545688 OGTO15294 1046 aa3.56□□□□□ -1.84
SNHG1-224ENST00000545688 GFPT2O94808 682 aa3.56□□□□□ -1.84
SNHG1-224ENST00000545688 NNMTP40261 264 aa3.56□□□□□ -1.84
SNHG1-224ENST00000545688 EIF5P55010 431 aaKnown RBP3.56□□□□□ -1.84
SNHG1-224ENST00000545688 NDUFV3P56181 108 aaKnown RBP3.56□□□□□ -1.84
SNHG1-224ENST00000545688 SNTB1Q13884 538 aaKnown RBP3.56□□□□□ -1.84
SNHG1-224ENST00000545688 C3AR1Q16581 482 aa3.56□□□□□ -1.84
SNHG1-224ENST00000545688 DUSP5Q16690 384 aa3.56□□□□□ -1.84
SNHG1-224ENST00000545688 TMEM266Q2M3C6 531 aa3.56□□□□□ -1.84
SNHG1-224ENST00000545688 KRTAP11-1Q8IUC1 163 aa3.56□□□□□ -1.84
SNHG1-224ENST00000545688 AVL9Q8NBF6 648 aa3.56□□□□□ -1.84
SNHG1-224ENST00000545688 RPLP0P6Q8NHW5 317 aa3.56□□□□□ -1.84
SNHG1-224ENST00000545688 NEDD4LQ96PU5 975 aa3.56□□□□□ -1.84
SNHG1-224ENST00000545688 CCDC68Q9H2F9 335 aa3.56□□□□□ -1.84
SNHG1-224ENST00000545688 TBC1D7Q9P0N9 293 aa3.56□□□□□ -1.84
SNHG1-224ENST00000545688 NHSQ6T4R5 1651 aa3.55□□□□□ -1.84
SNHG1-224ENST00000545688 TNS2Q63HR2 1409 aa3.55□□□□□ -1.84
SNHG1-224ENST00000545688 NSD2O96028 1365 aa3.55□□□□□ -1.84
SNHG1-224ENST00000545688 A0A087WZ39 114 aa3.55□□□□□ -1.84
SNHG1-224ENST00000545688 AHCYL1O43865 530 aa3.55□□□□□ -1.84
SNHG1-224ENST00000545688 SAP30O75446 220 aa3.55□□□□□ -1.84
SNHG1-224ENST00000545688 SERPING1P05155 500 aa3.55□□□□□ -1.84
SNHG1-224ENST00000545688 UBASH3AP57075 661 aa3.55□□□□□ -1.84
SNHG1-224ENST00000545688 ERVK-16P61578 105 aa3.55□□□□□ -1.84
SNHG1-224ENST00000545688 UPP1Q16831 310 aa3.55□□□□□ -1.84
SNHG1-224ENST00000545688 FAM106AQ4KMX7 169 aa3.55□□□□□ -1.84
SNHG1-224ENST00000545688 FGD3Q5JSP0 725 aa3.55□□□□□ -1.84
SNHG1-224ENST00000545688 HYIQ5T013 277 aa3.55□□□□□ -1.84
SNHG1-224ENST00000545688 TOM1L2Q6ZVM7 507 aa3.55□□□□□ -1.84
SNHG1-224ENST00000545688 CPEB2Q7Z5Q1 589 aaKnown RBP3.55□□□□□ -1.84
SNHG1-224ENST00000545688 CATSPER3Q86XQ3 398 aa3.55□□□□□ -1.84
SNHG1-224ENST00000545688 SLC22A15Q8IZD6 547 aa3.55□□□□□ -1.84
SNHG1-224ENST00000545688 ANKRD13CQ8N6S4 541 aa3.55□□□□□ -1.84
SNHG1-224ENST00000545688 OR4C15Q8NGM1 316 aa3.55□□□□□ -1.84
SNHG1-224ENST00000545688 RHOXF1Q8NHV9 184 aa3.55□□□□□ -1.84
SNHG1-224ENST00000545688 NDNQ99608 321 aa3.55□□□□□ -1.84
SNHG1-224ENST00000545688 ACTL8Q9H568 366 aa3.55□□□□□ -1.84
SNHG1-224ENST00000545688 CCDC7Q96M83 1385 aa3.54□□□□□ -1.84
SNHG1-224ENST00000545688 ARHGEF28Q8N1W1 1705 aaKnown RBP3.54□□□□□ -1.84
SNHG1-224ENST00000545688 WDR90Q96KV7 1748 aa3.54□□□□□ -1.84
SNHG1-224ENST00000545688 PRDM1O75626 825 aa3.54□□□□□ -1.84
SNHG1-224ENST00000545688 PSMD10O75832 226 aa3.54□□□□□ -1.84
SNHG1-224ENST00000545688 SLCO2B1O94956 709 aa3.54□□□□□ -1.84
SNHG1-224ENST00000545688 CELF2O95319 508 aaKnown RBP3.54□□□□□ -1.84
SNHG1-224ENST00000545688 RPLP0P05388 317 aaKnown RBP3.54□□□□□ -1.84
SNHG1-224ENST00000545688 F3P13726 295 aa3.54□□□□□ -1.84
SNHG1-224ENST00000545688 PKLRP30613 574 aa3.54□□□□□ -1.84
SNHG1-224ENST00000545688 MC5RP33032 325 aa3.54□□□□□ -1.84
SNHG1-224ENST00000545688 LIMK1P53667 647 aa3.54□□□□□ -1.84
SNHG1-224ENST00000545688 CSE1LP55060 971 aaKnown RBP3.54□□□□□ -1.84
SNHG1-224ENST00000545688 ACSM1Q08AH1 577 aa3.54□□□□□ -1.84
SNHG1-224ENST00000545688 ILF2Q12905 390 aaKnown RBP3.54□□□□□ -1.84
SNHG1-224ENST00000545688 RALGDSQ12967 914 aa3.54□□□□□ -1.84
SNHG1-224ENST00000545688 ALCAMQ13740 583 aa3.54□□□□□ -1.84
SNHG1-224ENST00000545688 SPATA1Q5VX52 437 aa3.54□□□□□ -1.84
SNHG1-224ENST00000545688 IQCHQ86VS3 1027 aa3.54□□□□□ -1.84
SNHG1-224ENST00000545688 SLC34A3Q8N130 599 aa3.54□□□□□ -1.84
SNHG1-224ENST00000545688 OCR1Q9BZK8 76 aa3.54□□□□□ -1.84
SNHG1-224ENST00000545688 B4GALT7Q9UBV7 327 aa3.54□□□□□ -1.84
SNHG1-224ENST00000545688 IL36AQ9UHA7 158 aa3.54□□□□□ -1.84
SNHG1-224ENST00000545688 PILRBQ9UKJ0 227 aa3.54□□□□□ -1.84
SNHG1-224ENST00000545688 VSIG4Q9Y279 399 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms