RNA–Protein interactions for RNA: ENST00000540216.5

CCDC130-202, Transcript of coiled-coil domain containing 130, humanhuman

TSL 2

Gene CCDC130, Length 995 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-202ENST00000540216 LRRC14BA6NHZ5 514 aa12.62□□□□□ -0.39
CCDC130-202ENST00000540216 A8MT66 165 aa12.62□□□□□ -0.39
CCDC130-202ENST00000540216 C4orf51C9J302 202 aa12.62□□□□□ -0.39
CCDC130-202ENST00000540216 B3GALT2O43825 422 aa12.62□□□□□ -0.39
CCDC130-202ENST00000540216 SLC28A2O43868 658 aa12.62□□□□□ -0.39
CCDC130-202ENST00000540216 GLRA3O75311 464 aa12.62□□□□□ -0.39
CCDC130-202ENST00000540216 CLDN9O95484 217 aa12.62□□□□□ -0.39
CCDC130-202ENST00000540216 B3GALT4O96024 378 aa12.62□□□□□ -0.39
CCDC130-202ENST00000540216 SERPINA7P05543 415 aa12.62□□□□□ -0.39
CCDC130-202ENST00000540216 RPS17P08708 135 aaKnown RBP12.62□□□□□ -0.39
CCDC130-202ENST00000540216 NUDT17P0C025 328 aa12.62□□□□□ -0.39
CCDC130-202ENST00000540216 SBK3P0C264 359 aa12.62□□□□□ -0.39
CCDC130-202ENST00000540216 PYGBP11216 843 aa12.62□□□□□ -0.39
CCDC130-202ENST00000540216 PCNAP12004 261 aa12.62□□□□□ -0.39
CCDC130-202ENST00000540216 TSFMP43897 325 aaKnown RBP12.62□□□□□ -0.39
CCDC130-202ENST00000540216 CCNG1P51959 295 aa12.62□□□□□ -0.39
CCDC130-202ENST00000540216 EFNA3P52797 238 aa12.62□□□□□ -0.39
CCDC130-202ENST00000540216 ARFIP1P53367 373 aa12.62□□□□□ -0.39
CCDC130-202ENST00000540216 PLA2G16P53816 162 aa12.62□□□□□ -0.39
CCDC130-202ENST00000540216 OLR1P78380 273 aa12.62□□□□□ -0.39
CCDC130-202ENST00000540216 RHAGQ02094 409 aa12.62□□□□□ -0.39
CCDC130-202ENST00000540216 EEF1A2Q05639 463 aaKnown RBP12.62□□□□□ -0.39
CCDC130-202ENST00000540216 ABRAXAS2Q15018 415 aa12.62□□□□□ -0.39
CCDC130-202ENST00000540216 AGAP7PQ5VUJ5 663 aa12.62□□□□□ -0.39
CCDC130-202ENST00000540216 ADNP2Q6IQ32 1131 aa12.62□□□□□ -0.39
CCDC130-202ENST00000540216 ABHD17CQ6PCB6 329 aa12.62□□□□□ -0.39
CCDC130-202ENST00000540216 QSOX2Q6ZRP7 698 aa12.62□□□□□ -0.39
CCDC130-202ENST00000540216 PRICKLE2Q7Z3G6 844 aa12.62□□□□□ -0.39
CCDC130-202ENST00000540216 CPEB2Q7Z5Q1 589 aaKnown RBP12.62□□□□□ -0.39
CCDC130-202ENST00000540216 PARP9Q8IXQ6 854 aa12.62□□□□□ -0.39
CCDC130-202ENST00000540216 KBTBD2Q8IY47 623 aa12.62□□□□□ -0.39
CCDC130-202ENST00000540216 RIBC1Q8N443 379 aaPredicted RBP12.62□□□□□ -0.39
CCDC130-202ENST00000540216 TMEM151AQ8N4L1 468 aa12.62□□□□□ -0.39
CCDC130-202ENST00000540216 CAVIN3Q969G5 261 aa12.62□□□□□ -0.39
CCDC130-202ENST00000540216 ATP6V1E2Q96A05 226 aa12.62□□□□□ -0.39
CCDC130-202ENST00000540216 AGAP4Q96P64 663 aa12.62□□□□□ -0.39
CCDC130-202ENST00000540216 MESP1Q9BRJ9 268 aa12.62□□□□□ -0.39
CCDC130-202ENST00000540216 CENPKQ9BS16 269 aa12.62□□□□□ -0.39
CCDC130-202ENST00000540216 TBCDQ9BTW9 1192 aa12.62□□□□□ -0.39
CCDC130-202ENST00000540216 NTMT1Q9BV86 223 aa12.62□□□□□ -0.39
CCDC130-202ENST00000540216 RBCK1Q9BYM8 510 aa12.62□□□□□ -0.39
CCDC130-202ENST00000540216 ZNF552Q9H707 407 aaPredicted RBP12.62□□□□□ -0.39
CCDC130-202ENST00000540216 PRM3Q9NNZ6 103 aa12.62□□□□□ -0.39
CCDC130-202ENST00000540216 TMEM216Q9P0N5 145 aa12.62□□□□□ -0.39
CCDC130-202ENST00000540216 MMACHCQ9Y4U1 282 aa12.62□□□□□ -0.39
CCDC130-202ENST00000540216 SYNDIG1LA6NDD5 238 aa12.61□□□□□ -0.39
CCDC130-202ENST00000540216 GOLGA8RI6L899 631 aa12.61□□□□□ -0.39
CCDC130-202ENST00000540216 PRMT3O60678 531 aa12.61□□□□□ -0.39
CCDC130-202ENST00000540216 CDC123O75794 336 aaPredicted RBP12.61□□□□□ -0.39
CCDC130-202ENST00000540216 OTCP00480 354 aa12.61□□□□□ -0.39
CCDC130-202ENST00000540216 TUBBP07437 444 aa12.61□□□□□ -0.39
CCDC130-202ENST00000540216 PLA2G2AP14555 144 aa12.61□□□□□ -0.39
CCDC130-202ENST00000540216 KRT15P19012 456 aa12.61□□□□□ -0.39
CCDC130-202ENST00000540216 ATP5F1P24539 256 aaPredicted RBP12.61□□□□□ -0.39
CCDC130-202ENST00000540216 ARL1P40616 181 aaPredicted RBP12.61□□□□□ -0.39
CCDC130-202ENST00000540216 SLCO1A2P46721 670 aa12.61□□□□□ -0.39
CCDC130-202ENST00000540216 RAB38P57729 211 aa12.61□□□□□ -0.39
CCDC130-202ENST00000540216 HERVK_113P63132 956 aa12.61□□□□□ -0.39
CCDC130-202ENST00000540216 TRAF3Q13114 568 aa12.61□□□□□ -0.39
CCDC130-202ENST00000540216 RAPSNQ13702 412 aa12.61□□□□□ -0.39
CCDC130-202ENST00000540216 PCOLCEQ15113 449 aa12.61□□□□□ -0.39
CCDC130-202ENST00000540216 NSDHLQ15738 373 aa12.61□□□□□ -0.39
CCDC130-202ENST00000540216 GGTA1PQ4G0N0 100 aa12.61□□□□□ -0.39
CCDC130-202ENST00000540216 KHDRBS2Q5VWX1 349 aaKnown RBP12.61□□□□□ -0.39
CCDC130-202ENST00000540216 JMJD6Q6NYC1 403 aaPredicted RBP12.61□□□□□ -0.39
CCDC130-202ENST00000540216 ANKRD37Q7Z713 158 aa12.61□□□□□ -0.39
CCDC130-202ENST00000540216 SLC22A9Q8IVM8 553 aa12.61□□□□□ -0.39
CCDC130-202ENST00000540216 CA13Q8N1Q1 262 aa12.61□□□□□ -0.39
CCDC130-202ENST00000540216 ARMC2Q8NEN0 867 aa12.61□□□□□ -0.39
CCDC130-202ENST00000540216 HUS1BQ8NHY5 278 aa12.61□□□□□ -0.39
CCDC130-202ENST00000540216 EPS8L3Q8TE67 593 aaKnown RBP12.61□□□□□ -0.39
CCDC130-202ENST00000540216 ZNF483Q8TF39 744 aaPredicted RBP12.61□□□□□ -0.39
CCDC130-202ENST00000540216 THOC3Q96J01 351 aaKnown RBP12.61□□□□□ -0.39
CCDC130-202ENST00000540216 F2RL3Q96RI0 385 aa12.61□□□□□ -0.39
CCDC130-202ENST00000540216 ERVK-6Q9BXR3 956 aa12.61□□□□□ -0.39
CCDC130-202ENST00000540216 NOL11Q9H8H0 719 aaKnown RBP12.61□□□□□ -0.39
CCDC130-202ENST00000540216 LYRM4Q9HD34 91 aa12.61□□□□□ -0.39
CCDC130-202ENST00000540216 DMRT3Q9NQL9 472 aa12.61□□□□□ -0.39
CCDC130-202ENST00000540216 PRDM9Q9NQV7 894 aa12.61□□□□□ -0.39
CCDC130-202ENST00000540216 PSD3Q9NYI0 1048 aa12.61□□□□□ -0.39
CCDC130-202ENST00000540216 PPT2Q9UMR5 302 aa12.61□□□□□ -0.39
CCDC130-202ENST00000540216 MRPS33Q9Y291 106 aaKnown RBP12.61□□□□□ -0.39
CCDC130-202ENST00000540216 IGKV3D-11A0A0A0MRZ8 115 aa12.6□□□□□ -0.39
CCDC130-202ENST00000540216 SMIM23A6NLE4 172 aa12.6□□□□□ -0.39
CCDC130-202ENST00000540216 MASP2O00187 686 aa12.6□□□□□ -0.39
CCDC130-202ENST00000540216 FOXE1O00358 373 aaPredicted RBP12.6□□□□□ -0.39
CCDC130-202ENST00000540216 CLDN4O14493 209 aa12.6□□□□□ -0.39
CCDC130-202ENST00000540216 OR7A17O14581 309 aa12.6□□□□□ -0.39
CCDC130-202ENST00000540216 B4GALT2O60909 372 aa12.6□□□□□ -0.39
CCDC130-202ENST00000540216 DNAJB6O75190 326 aa12.6□□□□□ -0.39
CCDC130-202ENST00000540216 SCELO95171 688 aa12.6□□□□□ -0.39
CCDC130-202ENST00000540216 PRR35P0CG20 571 aa12.6□□□□□ -0.39
CCDC130-202ENST00000540216 CCT5P48643 541 aa12.6□□□□□ -0.39
CCDC130-202ENST00000540216 HSD17B7P56937 341 aa12.6□□□□□ -0.39
CCDC130-202ENST00000540216 Q0VFX4 171 aa12.6□□□□□ -0.39
CCDC130-202ENST00000540216 CUL3Q13618 768 aa12.6□□□□□ -0.39
CCDC130-202ENST00000540216 DDX39BQ13838 428 aaKnown RBP12.6□□□□□ -0.39
CCDC130-202ENST00000540216 EXT1Q16394 746 aa12.6□□□□□ -0.39
CCDC130-202ENST00000540216 CPSF6Q16630 551 aaKnown RBP eCLIP12.6□□□□□ -0.39
CCDC130-202ENST00000540216 ERCC6LQ2NKX8 1250 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms