RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 ETV3P41162 512 aa13.96□□□□□ -0.18
CDCA3-207ENST00000538862 PRLHRP49683 370 aa13.96□□□□□ -0.18
CDCA3-207ENST00000538862 SMN1Q16637 294 aaKnown RBP13.96□□□□□ -0.18
CDCA3-207ENST00000538862 ZNF284Q2VY69 593 aa13.96□□□□□ -0.18
CDCA3-207ENST00000538862 FAM78AQ5JUQ0 283 aa13.96□□□□□ -0.18
CDCA3-207ENST00000538862 C10orf62Q5T681 223 aaPredicted RBP13.96□□□□□ -0.18
CDCA3-207ENST00000538862 TANGO2Q6ICL3 276 aa13.96□□□□□ -0.18
CDCA3-207ENST00000538862 ADIPOR2Q86V24 386 aa13.96□□□□□ -0.18
CDCA3-207ENST00000538862 OR6Q1Q8NGQ2 317 aa13.96□□□□□ -0.18
CDCA3-207ENST00000538862 GOT1L1Q8NHS2 421 aaPredicted RBP13.96□□□□□ -0.18
CDCA3-207ENST00000538862 HUS1BQ8NHY5 278 aa13.96□□□□□ -0.18
CDCA3-207ENST00000538862 NDNFQ8TB73 568 aa13.96□□□□□ -0.18
CDCA3-207ENST00000538862 APH1BQ8WW43 257 aa13.96□□□□□ -0.18
CDCA3-207ENST00000538862 FOPNLQ96NB1 174 aa13.96□□□□□ -0.18
CDCA3-207ENST00000538862 ALPK1Q96QP1 1244 aa13.96□□□□□ -0.18
CDCA3-207ENST00000538862 PKP4Q99569 1192 aa13.96□□□□□ -0.18
CDCA3-207ENST00000538862 CCM2Q9BSQ5 444 aa13.96□□□□□ -0.18
CDCA3-207ENST00000538862 BHLHE41Q9C0J9 482 aaPredicted RBP13.96□□□□□ -0.18
CDCA3-207ENST00000538862 SMG9Q9H0W8 520 aaKnown RBP13.96□□□□□ -0.18
CDCA3-207ENST00000538862 RUBCNLQ9H714 662 aa13.96□□□□□ -0.18
CDCA3-207ENST00000538862 TMEM165Q9HC07 324 aa13.96□□□□□ -0.18
CDCA3-207ENST00000538862 PLCXD1Q9NUJ7 323 aa13.96□□□□□ -0.18
CDCA3-207ENST00000538862 GDE1Q9NZC3 331 aa13.96□□□□□ -0.18
CDCA3-207ENST00000538862 ATP6V1HQ9UI12 483 aa13.96□□□□□ -0.18
CDCA3-207ENST00000538862 PCDHGA6Q9Y5G7 932 aa13.96□□□□□ -0.18
CDCA3-207ENST00000538862 KCNE2Q9Y6J6 123 aa13.96□□□□□ -0.18
CDCA3-207ENST00000538862 COL4A3Q01955 1670 aa13.96□□□□□ -0.18
CDCA3-207ENST00000538862 TMEM229AB2RXF0 380 aa13.95□□□□□ -0.18
CDCA3-207ENST00000538862 BOLA2-SMG1P6H3BVE0 249 aa13.95□□□□□ -0.18
CDCA3-207ENST00000538862 NPC1O15118 1278 aa13.95□□□□□ -0.18
CDCA3-207ENST00000538862 TSPAN6O43657 245 aa13.95□□□□□ -0.18
CDCA3-207ENST00000538862 TIMP2P16035 220 aa13.95□□□□□ -0.18
CDCA3-207ENST00000538862 IMPA1P29218 277 aa13.95□□□□□ -0.18
CDCA3-207ENST00000538862 RRM2P31350 389 aa13.95□□□□□ -0.18
CDCA3-207ENST00000538862 VIPR2P41587 438 aa13.95□□□□□ -0.18
CDCA3-207ENST00000538862 VBP1P61758 197 aa13.95□□□□□ -0.18
CDCA3-207ENST00000538862 SF1Q15637 639 aaKnown RBP13.95□□□□□ -0.18
CDCA3-207ENST00000538862 ADCK1Q86TW2 530 aa13.95□□□□□ -0.18
CDCA3-207ENST00000538862 FAM124AQ86V42 546 aa13.95□□□□□ -0.18
CDCA3-207ENST00000538862 ENTHD1Q8IYW4 607 aa13.95□□□□□ -0.18
CDCA3-207ENST00000538862 ITPKCQ96DU7 683 aa13.95□□□□□ -0.18
CDCA3-207ENST00000538862 MYOCQ99972 504 aa13.95□□□□□ -0.18
CDCA3-207ENST00000538862 RASSF1Q9NS23 344 aa13.95□□□□□ -0.18
CDCA3-207ENST00000538862 SELENONQ9NZV5 590 aa13.95□□□□□ -0.18
CDCA3-207ENST00000538862 FBXL21Q9UKT6 434 aa13.95□□□□□ -0.18
CDCA3-207ENST00000538862 MUC6Q6W4X9 2439 aa13.95□□□□□ -0.18
CDCA3-207ENST00000538862 NEDD8-MDP1E9PL57 170 aa13.94□□□□□ -0.18
CDCA3-207ENST00000538862 GCM2O75603 506 aaPredicted RBP13.94□□□□□ -0.18
CDCA3-207ENST00000538862 LEFTY1O75610 366 aa13.94□□□□□ -0.18
CDCA3-207ENST00000538862 SLC16A8O95907 504 aa13.94□□□□□ -0.18
CDCA3-207ENST00000538862 SRPRAP08240 638 aaKnown RBP13.94□□□□□ -0.18
CDCA3-207ENST00000538862 FCARP24071 287 aa13.94□□□□□ -0.18
CDCA3-207ENST00000538862 RBBP4Q09028 425 aa13.94□□□□□ -0.18
CDCA3-207ENST00000538862 GAB1Q13480 694 aa13.94□□□□□ -0.18
CDCA3-207ENST00000538862 HIST2H2ACQ16777 129 aaPredicted RBP13.94□□□□□ -0.18
CDCA3-207ENST00000538862 ZNF648Q5T619 568 aaPredicted RBP13.94□□□□□ -0.18
CDCA3-207ENST00000538862 IER5LQ5T953 404 aa13.94□□□□□ -0.18
CDCA3-207ENST00000538862 MED27Q6P2C8 311 aa13.94□□□□□ -0.18
CDCA3-207ENST00000538862 SLCO4C1Q6ZQN7 724 aa13.94□□□□□ -0.18
CDCA3-207ENST00000538862 MTSS1LQ765P7 747 aa13.94□□□□□ -0.18
CDCA3-207ENST00000538862 DPPA4Q7L190 304 aa13.94□□□□□ -0.18
CDCA3-207ENST00000538862 TECPR1Q7Z6L1 1165 aa13.94□□□□□ -0.18
CDCA3-207ENST00000538862 P3H2Q8IVL5 708 aa13.94□□□□□ -0.18
CDCA3-207ENST00000538862 NAGSQ8N159 534 aa13.94□□□□□ -0.18
CDCA3-207ENST00000538862 RASGEF1AQ8N9B8 481 aa13.94□□□□□ -0.18
CDCA3-207ENST00000538862 ZBTB8BQ8NAP8 495 aaPredicted RBP13.94□□□□□ -0.18
CDCA3-207ENST00000538862 FBXO15Q8NCQ5 510 aaPredicted RBP13.94□□□□□ -0.18
CDCA3-207ENST00000538862 IRF7Q92985 503 aa13.94□□□□□ -0.18
CDCA3-207ENST00000538862 GLYATL1Q969I3 302 aa13.94□□□□□ -0.18
CDCA3-207ENST00000538862 LGALS12Q96DT0 336 aa13.94□□□□□ -0.18
CDCA3-207ENST00000538862 RHNO1Q9BSD3 238 aa13.94□□□□□ -0.18
CDCA3-207ENST00000538862 REEP4Q9H6H4 257 aa13.94□□□□□ -0.18
CDCA3-207ENST00000538862 DAPK2Q9UIK4 370 aa13.94□□□□□ -0.18
CDCA3-207ENST00000538862 ITGB1BP2Q9UKP3 347 aa13.94□□□□□ -0.18
CDCA3-207ENST00000538862 CA14Q9ULX7 337 aa13.94□□□□□ -0.18
CDCA3-207ENST00000538862 CCL26Q9Y258 94 aa13.94□□□□□ -0.18
CDCA3-207ENST00000538862 GNG14A0A1W2PPG7 69 aa13.94□□□□□ -0.18
CDCA3-207ENST00000538862 A8MVJ9 347 aa13.94□□□□□ -0.18
CDCA3-207ENST00000538862 TNFRSF11BO00300 401 aa13.94□□□□□ -0.18
CDCA3-207ENST00000538862 ANXA8P13928 327 aa13.94□□□□□ -0.18
CDCA3-207ENST00000538862 GGT2P36268 569 aa13.94□□□□□ -0.18
CDCA3-207ENST00000538862 TGFBR2P37173 567 aa13.94□□□□□ -0.18
CDCA3-207ENST00000538862 BDKRB1P46663 353 aa13.94□□□□□ -0.18
CDCA3-207ENST00000538862 CTSCP53634 463 aa13.94□□□□□ -0.18
CDCA3-207ENST00000538862 TUBA1BP68363 451 aa13.94□□□□□ -0.18
CDCA3-207ENST00000538862 TEKQ02763 1124 aa13.94□□□□□ -0.18
CDCA3-207ENST00000538862 ELP6Q0PNE2 266 aa13.94□□□□□ -0.18
CDCA3-207ENST00000538862 DGCR6Q14129 220 aa13.94□□□□□ -0.18
CDCA3-207ENST00000538862 CYP2A13Q16696 494 aa13.94□□□□□ -0.18
CDCA3-207ENST00000538862 CCSMST1Q4G0I0 132 aa13.94□□□□□ -0.18
CDCA3-207ENST00000538862 ARSIQ5FYB1 569 aa13.94□□□□□ -0.18
CDCA3-207ENST00000538862 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.94□□□□□ -0.18
CDCA3-207ENST00000538862 AHSA2Q719I0 299 aa13.94□□□□□ -0.18
CDCA3-207ENST00000538862 TUBA1AQ71U36 451 aa13.94□□□□□ -0.18
CDCA3-207ENST00000538862 BTLAQ7Z6A9 289 aa13.94□□□□□ -0.18
CDCA3-207ENST00000538862 TSEN54Q7Z6J9 526 aaKnown RBP13.94□□□□□ -0.18
CDCA3-207ENST00000538862 KIAA0907Q7Z7F0 614 aaPredicted RBP13.94□□□□□ -0.18
CDCA3-207ENST00000538862 SIX5Q8N196 739 aa13.94□□□□□ -0.18
CDCA3-207ENST00000538862 MFSD4AQ8N468 514 aa13.94□□□□□ -0.18
CDCA3-207ENST00000538862 OR4A15Q8NGL6 344 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms