RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 SLC26A5P58743 744 aa9.03□□□□□ -0.96
SSBP3-215ENST00000533946 ARG2P78540 354 aa9.03□□□□□ -0.96
SSBP3-215ENST00000533946 CHIT1Q13231 466 aa9.03□□□□□ -0.96
SSBP3-215ENST00000533946 TUBA3CQ13748 450 aa9.03□□□□□ -0.96
SSBP3-215ENST00000533946 NAA25Q14CX7 972 aa9.03□□□□□ -0.96
SSBP3-215ENST00000533946 XKR6Q5GH73 641 aa9.03□□□□□ -0.96
SSBP3-215ENST00000533946 ACER2Q5QJU3 275 aa9.03□□□□□ -0.96
SSBP3-215ENST00000533946 GRTP1Q5TC63 336 aa9.03□□□□□ -0.96
SSBP3-215ENST00000533946 H3F3CQ6NXT2 135 aa9.03□□□□□ -0.96
SSBP3-215ENST00000533946 C8orf74Q6P047 294 aa9.03□□□□□ -0.96
SSBP3-215ENST00000533946 TUBA3EQ6PEY2 450 aa9.03□□□□□ -0.96
SSBP3-215ENST00000533946 TMIGD1Q6UXZ0 262 aa9.03□□□□□ -0.96
SSBP3-215ENST00000533946 RIPOR1Q6ZS17 1223 aa9.03□□□□□ -0.96
SSBP3-215ENST00000533946 ADAMTSL2Q86TH1 951 aa9.03□□□□□ -0.96
SSBP3-215ENST00000533946 MMGT1Q8N4V1 131 aa9.03□□□□□ -0.96
SSBP3-215ENST00000533946 FAM47BQ8NA70 645 aa9.03□□□□□ -0.96
SSBP3-215ENST00000533946 PDPRQ8NCN5 879 aa9.03□□□□□ -0.96
SSBP3-215ENST00000533946 BBOF1Q8ND07 529 aa9.03□□□□□ -0.96
SSBP3-215ENST00000533946 ATL1Q8WXF7 558 aa9.03□□□□□ -0.96
SSBP3-215ENST00000533946 ANKRD7Q92527 254 aa9.03□□□□□ -0.96
SSBP3-215ENST00000533946 NACC2Q96BF6 587 aa9.03□□□□□ -0.96
SSBP3-215ENST00000533946 NSUN5Q96P11 429 aaKnown RBP9.03□□□□□ -0.96
SSBP3-215ENST00000533946 CDK15Q96Q40 435 aa9.03□□□□□ -0.96
SSBP3-215ENST00000533946 LMF1Q96S06 567 aa9.03□□□□□ -0.96
SSBP3-215ENST00000533946 MAPKAP1Q9BPZ7 522 aa9.03□□□□□ -0.96
SSBP3-215ENST00000533946 AIF1LQ9BQI0 150 aa9.03□□□□□ -0.96
SSBP3-215ENST00000533946 CD244Q9BZW8 370 aa9.03□□□□□ -0.96
SSBP3-215ENST00000533946 CDC42EP4Q9H3Q1 356 aaKnown RBP9.03□□□□□ -0.96
SSBP3-215ENST00000533946 CDCP1Q9H5V8 836 aa9.03□□□□□ -0.96
SSBP3-215ENST00000533946 POPDC3Q9HBV1 291 aa9.03□□□□□ -0.96
SSBP3-215ENST00000533946 KLHL1Q9NR64 748 aa9.03□□□□□ -0.96
SSBP3-215ENST00000533946 DNAJC11Q9NVH1 559 aa9.03□□□□□ -0.96
SSBP3-215ENST00000533946 KCMF1Q9P0J7 381 aa9.03□□□□□ -0.96
SSBP3-215ENST00000533946 RNF112Q9ULX5 631 aa9.03□□□□□ -0.96
SSBP3-215ENST00000533946 OSGIN2Q9Y236 505 aa9.03□□□□□ -0.96
SSBP3-215ENST00000533946 KCNE2Q9Y6J6 123 aa9.03□□□□□ -0.96
SSBP3-215ENST00000533946 TMEM200CA6NKL6 621 aa9.02□□□□□ -0.97
SSBP3-215ENST00000533946 MAGEB17A8MXT2 336 aa9.02□□□□□ -0.97
SSBP3-215ENST00000533946 SUPT3HB4E1H0 165 aa9.02□□□□□ -0.97
SSBP3-215ENST00000533946 HRKO00198 91 aa9.02□□□□□ -0.97
SSBP3-215ENST00000533946 CYR61O00622 381 aa9.02□□□□□ -0.97
SSBP3-215ENST00000533946 NDC80O14777 642 aa9.02□□□□□ -0.97
SSBP3-215ENST00000533946 CLGNO14967 610 aa9.02□□□□□ -0.97
SSBP3-215ENST00000533946 SUPT3HO75486 399 aa9.02□□□□□ -0.97
SSBP3-215ENST00000533946 STK16O75716 305 aa9.02□□□□□ -0.97
SSBP3-215ENST00000533946 LDLRP01130 860 aa9.02□□□□□ -0.97
SSBP3-215ENST00000533946 TGFB1P01137 390 aa9.02□□□□□ -0.97
SSBP3-215ENST00000533946 SERPINA6P08185 405 aa9.02□□□□□ -0.97
SSBP3-215ENST00000533946 TSPAN8P19075 237 aa9.02□□□□□ -0.97
SSBP3-215ENST00000533946 SPRP35270 261 aaPredicted RBP9.02□□□□□ -0.97
SSBP3-215ENST00000533946 GRK3P35626 688 aa9.02□□□□□ -0.97
SSBP3-215ENST00000533946 RFC3P40938 356 aa9.02□□□□□ -0.97
SSBP3-215ENST00000533946 TSFMP43897 325 aaKnown RBP9.02□□□□□ -0.97
SSBP3-215ENST00000533946 GPR143P51810 404 aa9.02□□□□□ -0.97
SSBP3-215ENST00000533946 NEK2P51955 445 aa9.02□□□□□ -0.97
SSBP3-215ENST00000533946 HERC3Q15034 1050 aa9.02□□□□□ -0.97
SSBP3-215ENST00000533946 CDSNQ15517 529 aa9.02□□□□□ -0.97
SSBP3-215ENST00000533946 FHL5Q5TD97 284 aa9.02□□□□□ -0.97
SSBP3-215ENST00000533946 C1QL3Q5VWW1 255 aa9.02□□□□□ -0.97
SSBP3-215ENST00000533946 ZNF787Q6DD87 383 aa9.02□□□□□ -0.97
SSBP3-215ENST00000533946 PLAG1Q6DJT9 500 aa9.02□□□□□ -0.97
SSBP3-215ENST00000533946 ABHD17CQ6PCB6 329 aa9.02□□□□□ -0.97
SSBP3-215ENST00000533946 RAPH1Q70E73 1250 aa9.02□□□□□ -0.97
SSBP3-215ENST00000533946 OR4N5Q8IXE1 308 aa9.02□□□□□ -0.97
SSBP3-215ENST00000533946 DCAKDQ8WVC6 231 aa9.02□□□□□ -0.97
SSBP3-215ENST00000533946 FAR1Q8WVX9 515 aa9.02□□□□□ -0.97
SSBP3-215ENST00000533946 METTL21AQ8WXB1 218 aa9.02□□□□□ -0.97
SSBP3-215ENST00000533946 HAS2Q92819 552 aa9.02□□□□□ -0.97
SSBP3-215ENST00000533946 SLX1AQ9BQ83 275 aa9.02□□□□□ -0.97
SSBP3-215ENST00000533946 TUBB6Q9BUF5 446 aa9.02□□□□□ -0.97
SSBP3-215ENST00000533946 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.02□□□□□ -0.971e-6■■■□□ 15
SSBP3-215ENST00000533946 RAB17Q9H0T7 212 aa9.02□□□□□ -0.97
SSBP3-215ENST00000533946 EPB41L4BQ9H329 900 aa9.02□□□□□ -0.97
SSBP3-215ENST00000533946 OR51B5Q9H339 312 aa9.02□□□□□ -0.97
SSBP3-215ENST00000533946 KCNK13Q9HB14 408 aa9.02□□□□□ -0.97
SSBP3-215ENST00000533946 RIC8BQ9NVN3 520 aa9.02□□□□□ -0.97
SSBP3-215ENST00000533946 RNF11Q9Y3C5 154 aa9.02□□□□□ -0.97
SSBP3-215ENST00000533946 APCP25054 2843 aa9.02□□□□□ -0.97
SSBP3-215ENST00000533946 A0A096LPK6 155 aa9.01□□□□□ -0.97
SSBP3-215ENST00000533946 A0A0G2JMM0 328 aa9.01□□□□□ -0.97
SSBP3-215ENST00000533946 A0A1W2PPB8 328 aa9.01□□□□□ -0.97
SSBP3-215ENST00000533946 A0A1W2PRS3 328 aa9.01□□□□□ -0.97
SSBP3-215ENST00000533946 TCRBV16S1A1N1A0A5B0 115 aa9.01□□□□□ -0.97
SSBP3-215ENST00000533946 WIPF3A6NGB9 483 aa9.01□□□□□ -0.97
SSBP3-215ENST00000533946 KIR3DP1A8MWS1 328 aa9.01□□□□□ -0.97
SSBP3-215ENST00000533946 PRPF4O43172 522 aaKnown RBP eCLIP9.01□□□□□ -0.97
SSBP3-215ENST00000533946 LRRTM2O43300 516 aa9.01□□□□□ -0.97
SSBP3-215ENST00000533946 PRMT3O60678 531 aa9.01□□□□□ -0.97
SSBP3-215ENST00000533946 KERAO60938 352 aa9.01□□□□□ -0.97
SSBP3-215ENST00000533946 LDB3O75112 727 aa9.01□□□□□ -0.97
SSBP3-215ENST00000533946 NEURL1O76050 574 aa9.01□□□□□ -0.97
SSBP3-215ENST00000533946 IPO13O94829 963 aaKnown RBP9.01□□□□□ -0.97
SSBP3-215ENST00000533946 LTA4HP09960 611 aaKnown RBP9.01□□□□□ -0.97
SSBP3-215ENST00000533946 MYBL2P10244 700 aa9.01□□□□□ -0.97
SSBP3-215ENST00000533946 GNAZP19086 355 aa9.01□□□□□ -0.97
SSBP3-215ENST00000533946 TPP2P29144 1249 aaPredicted RBP9.01□□□□□ -0.97
SSBP3-215ENST00000533946 PTGER1P34995 402 aa9.01□□□□□ -0.97
SSBP3-215ENST00000533946 MSH2P43246 934 aa9.01□□□□□ -0.97
SSBP3-215ENST00000533946 HNMTP50135 292 aa9.01□□□□□ -0.97
SSBP3-215ENST00000533946 LIM2P55344 173 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms