RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 CRB3Q9BUF7 120 aa11.33□□□□□ -0.6
SSBP3-214ENST00000533209 MECRQ9BV79 373 aa11.33□□□□□ -0.6
SSBP3-214ENST00000533209 GATA5Q9BWX5 397 aaPredicted RBP11.33□□□□□ -0.6
SSBP3-214ENST00000533209 TMBIM4Q9HC24 238 aa11.33□□□□□ -0.6
SSBP3-214ENST00000533209 PRDM7Q9NQW5 492 aa11.33□□□□□ -0.6
SSBP3-214ENST00000533209 LANCL2Q9NS86 450 aa11.33□□□□□ -0.6
SSBP3-214ENST00000533209 SEMA3GQ9NS98 782 aa11.33□□□□□ -0.6
SSBP3-214ENST00000533209 PSD3Q9NYI0 1048 aa11.33□□□□□ -0.6
SSBP3-214ENST00000533209 TRPS1Q9UHF7 1281 aa11.33□□□□□ -0.6
SSBP3-214ENST00000533209 PPT2Q9UMR5 302 aa11.33□□□□□ -0.6
SSBP3-214ENST00000533209 POLHQ9Y253 713 aa11.33□□□□□ -0.6
SSBP3-214ENST00000533209 STK38LQ9Y2H1 464 aa11.33□□□□□ -0.6
SSBP3-214ENST00000533209 HS3ST3B1Q9Y662 390 aa11.33□□□□□ -0.6
SSBP3-214ENST00000533209 ATMQ13315 3056 aa11.32□□□□□ -0.6
SSBP3-214ENST00000533209 AGPSO00116 658 aa11.32□□□□□ -0.6
SSBP3-214ENST00000533209 SAP18O00422 153 aaKnown RBP11.32□□□□□ -0.6
SSBP3-214ENST00000533209 TRIM13O60858 407 aa11.32□□□□□ -0.6
SSBP3-214ENST00000533209 ETHE1O95571 254 aa11.32□□□□□ -0.6
SSBP3-214ENST00000533209 ESRRBO95718 433 aa11.32□□□□□ -0.6
SSBP3-214ENST00000533209 MMP11P24347 488 aa11.32□□□□□ -0.6
SSBP3-214ENST00000533209 PTX3P26022 381 aaPredicted RBP11.32□□□□□ -0.6
SSBP3-214ENST00000533209 CERS1P27544 350 aa11.32□□□□□ -0.6
SSBP3-214ENST00000533209 EMP2P54851 167 aa11.32□□□□□ -0.6
SSBP3-214ENST00000533209 PKNOX1P55347 436 aa11.32□□□□□ -0.6
SSBP3-214ENST00000533209 IFT88Q13099 833 aa11.32□□□□□ -0.6
SSBP3-214ENST00000533209 ATP1A4Q13733 1029 aa11.32□□□□□ -0.6
SSBP3-214ENST00000533209 RUNX2Q13950 521 aa11.32□□□□□ -0.6
SSBP3-214ENST00000533209 LINC00303Q3SY05 128 aa11.32□□□□□ -0.6
SSBP3-214ENST00000533209 C10orf62Q5T681 223 aaPredicted RBP11.32□□□□□ -0.6
SSBP3-214ENST00000533209 TTC19Q6DKK2 380 aaPredicted RBP11.32□□□□□ -0.6
SSBP3-214ENST00000533209 ZNF793Q6ZN11 406 aa11.32□□□□□ -0.6
SSBP3-214ENST00000533209 CA13Q8N1Q1 262 aa11.32□□□□□ -0.6
SSBP3-214ENST00000533209 CDYL2Q8N8U2 506 aa11.32□□□□□ -0.6
SSBP3-214ENST00000533209 SRFBP1Q8NEF9 429 aaKnown RBP11.32□□□□□ -0.6
SSBP3-214ENST00000533209 AGAP11Q8TF27 550 aa11.32□□□□□ -0.6
SSBP3-214ENST00000533209 THAP4Q8WY91 577 aa11.32□□□□□ -0.6
SSBP3-214ENST00000533209 EXTL1Q92935 676 aa11.32□□□□□ -0.6
SSBP3-214ENST00000533209 NACC2Q96BF6 587 aa11.32□□□□□ -0.6
SSBP3-214ENST00000533209 TLCD1Q96CP7 247 aa11.32□□□□□ -0.6
SSBP3-214ENST00000533209 PEX11GQ96HA9 241 aa11.32□□□□□ -0.6
SSBP3-214ENST00000533209 KCNC2Q96PR1 638 aa11.32□□□□□ -0.6
SSBP3-214ENST00000533209 OR1F2PQ96R84 312 aa11.32□□□□□ -0.6
SSBP3-214ENST00000533209 SERINC2Q96SA4 455 aa11.32□□□□□ -0.6
SSBP3-214ENST00000533209 MESP1Q9BRJ9 268 aa11.32□□□□□ -0.6
SSBP3-214ENST00000533209 TBCDQ9BTW9 1192 aa11.32□□□□□ -0.6
SSBP3-214ENST00000533209 SLC29A3Q9BZD2 475 aa11.32□□□□□ -0.6
SSBP3-214ENST00000533209 VN1R1Q9GZP7 353 aa11.32□□□□□ -0.6
SSBP3-214ENST00000533209 STMN4Q9H169 189 aaPredicted RBP11.32□□□□□ -0.6
SSBP3-214ENST00000533209 PRM3Q9NNZ6 103 aa11.32□□□□□ -0.6
SSBP3-214ENST00000533209 FARSBQ9NSD9 589 aaKnown RBP11.32□□□□□ -0.6
SSBP3-214ENST00000533209 ARGLU1Q9NWB6 273 aaPredicted RBP11.32□□□□□ -0.6
SSBP3-214ENST00000533209 C3orf18Q9UK00 162 aa11.32□□□□□ -0.6
SSBP3-214ENST00000533209 MAN2B2Q9Y2E5 1009 aa11.32□□□□□ -0.6
SSBP3-214ENST00000533209 KCNMB2Q9Y691 235 aa11.32□□□□□ -0.6
SSBP3-214ENST00000533209 IGSF10Q6WRI0 2623 aa11.32□□□□□ -0.6
SSBP3-214ENST00000533209 PCSK5Q92824 1860 aa11.32□□□□□ -0.6
SSBP3-214ENST00000533209 A0A088AWK7 358 aa11.31□□□□□ -0.6
SSBP3-214ENST00000533209 IDSB3KWA1 339 aa11.31□□□□□ -0.6
SSBP3-214ENST00000533209 RTCAO00442 366 aaKnown RBP11.31□□□□□ -0.6
SSBP3-214ENST00000533209 MANBAO00462 879 aa11.31□□□□□ -0.6
SSBP3-214ENST00000533209 PLPP1O14494 284 aa11.31□□□□□ -0.6
SSBP3-214ENST00000533209 SOCS6O14544 535 aa11.31□□□□□ -0.6
SSBP3-214ENST00000533209 B3GALT2O43825 422 aa11.31□□□□□ -0.6
SSBP3-214ENST00000533209 SCELO95171 688 aa11.31□□□□□ -0.6
SSBP3-214ENST00000533209 PDYNP01213 254 aa11.31□□□□□ -0.6
SSBP3-214ENST00000533209 IGHEP01854 428 aa11.31□□□□□ -0.6
SSBP3-214ENST00000533209 ENO1P06733 434 aaKnown RBP11.31□□□□□ -0.6
SSBP3-214ENST00000533209 HEXBP07686 556 aa11.31□□□□□ -0.6
SSBP3-214ENST00000533209 BPGMP07738 259 aa11.31□□□□□ -0.6
SSBP3-214ENST00000533209 FHP07954 510 aa11.31□□□□□ -0.6
SSBP3-214ENST00000533209 RNH1P13489 461 aaKnown RBP11.31□□□□□ -0.6
SSBP3-214ENST00000533209 ZNF10P21506 573 aaPredicted RBP11.31□□□□□ -0.6
SSBP3-214ENST00000533209 IL10P22301 178 aa11.31□□□□□ -0.6
SSBP3-214ENST00000533209 ATP5A1P25705 553 aaKnown RBP11.31□□□□□ -0.6
SSBP3-214ENST00000533209 MTTPP55157 894 aa11.31□□□□□ -0.6
SSBP3-214ENST00000533209 TGM3Q08188 693 aa11.31□□□□□ -0.6
SSBP3-214ENST00000533209 ASPHQ12797 758 aa11.31□□□□□ -0.6
SSBP3-214ENST00000533209 CUL3Q13618 768 aa11.31□□□□□ -0.6
SSBP3-214ENST00000533209 SGO1Q5FBB7 561 aa11.31□□□□□ -0.6
SSBP3-214ENST00000533209 CFAP157Q5JU67 520 aa11.31□□□□□ -0.6
SSBP3-214ENST00000533209 TCHHL1Q5QJ38 904 aaPredicted RBP11.31□□□□□ -0.6
SSBP3-214ENST00000533209 OR4C11Q6IEV9 310 aa11.31□□□□□ -0.6
SSBP3-214ENST00000533209 BORAQ6PGQ7 559 aa11.31□□□□□ -0.6
SSBP3-214ENST00000533209 PCSK4Q6UW60 755 aa11.31□□□□□ -0.6
SSBP3-214ENST00000533209 METTL6Q8TCB7 284 aa11.31□□□□□ -0.6
SSBP3-214ENST00000533209 RGMAQ96B86 450 aa11.31□□□□□ -0.6
SSBP3-214ENST00000533209 TBC1D20Q96BZ9 403 aa11.31□□□□□ -0.6
SSBP3-214ENST00000533209 IP6K3Q96PC2 410 aa11.31□□□□□ -0.6
SSBP3-214ENST00000533209 KCNA7Q96RP8 456 aa11.31□□□□□ -0.6
SSBP3-214ENST00000533209 SERPINI1Q99574 410 aa11.31□□□□□ -0.6
SSBP3-214ENST00000533209 SORBS1Q9BX66 1292 aaKnown RBP11.31□□□□□ -0.6
SSBP3-214ENST00000533209 NPLQ9BXD5 320 aaPredicted RBP11.31□□□□□ -0.6
SSBP3-214ENST00000533209 ZNF717Q9BY31 904 aaPredicted RBP11.31□□□□□ -0.6
SSBP3-214ENST00000533209 RBCK1Q9BYM8 510 aa11.31□□□□□ -0.6
SSBP3-214ENST00000533209 ROGDIQ9GZN7 287 aa11.31□□□□□ -0.6
SSBP3-214ENST00000533209 ELOVL6Q9H5J4 265 aa11.31□□□□□ -0.6
SSBP3-214ENST00000533209 TNFRSF12AQ9NP84 129 aa11.31□□□□□ -0.6
SSBP3-214ENST00000533209 MID1IP1Q9NPA3 183 aa11.31□□□□□ -0.6
SSBP3-214ENST00000533209 P4HTMQ9NXG6 502 aa11.31□□□□□ -0.6
SSBP3-214ENST00000533209 MKL2Q9ULH7 1088 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms