RNA–Protein interactions for RNA: ENST00000531709.6

NXF1-211, Transcript of nuclear RNA export factor 1, humanhuman

TSL 1 (best) BASIC

Gene NXF1, Length 4,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-211ENST00000531709 CD83Q01151 205 aa10.89□□□□□ -0.67
NXF1-211ENST00000531709 ZNF763Q0D2J5 394 aa10.89□□□□□ -0.67
NXF1-211ENST00000531709 KIAA0040Q15053 153 aa10.89□□□□□ -0.67
NXF1-211ENST00000531709 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.89□□□□□ -0.67
NXF1-211ENST00000531709 PRSS36Q5K4E3 855 aa10.89□□□□□ -0.67
NXF1-211ENST00000531709 ZNF544Q6NX49 715 aa10.89□□□□□ -0.67
NXF1-211ENST00000531709 NEK10Q6ZWH5 1172 aa10.89□□□□□ -0.67
NXF1-211ENST00000531709 LYSMD2Q8IV50 215 aa10.89□□□□□ -0.67
NXF1-211ENST00000531709 PIK3R3Q92569 461 aa10.89□□□□□ -0.67
NXF1-211ENST00000531709 IGSF21Q96ID5 467 aa10.89□□□□□ -0.67
NXF1-211ENST00000531709 CITED4Q96RK1 184 aa10.89□□□□□ -0.67
NXF1-211ENST00000531709 GFM1Q96RP9 751 aaKnown RBP10.89□□□□□ -0.67
NXF1-211ENST00000531709 ZIC5Q96T25 663 aa10.89□□□□□ -0.67
NXF1-211ENST00000531709 REEP4Q9H6H4 257 aa10.89□□□□□ -0.67
NXF1-211ENST00000531709 CPNE5Q9HCH3 593 aa10.89□□□□□ -0.67
NXF1-211ENST00000531709 EQTNQ9NQ60 294 aa10.89□□□□□ -0.67
NXF1-211ENST00000531709 NDRG4Q9ULP0 352 aaKnown RBP10.89□□□□□ -0.67
NXF1-211ENST00000531709 PCDHGA6Q9Y5G7 932 aa10.89□□□□□ -0.67
NXF1-211ENST00000531709 INSL5Q9Y5Q6 135 aa10.89□□□□□ -0.67
NXF1-211ENST00000531709 MICAL3Q7RTP6 2002 aa10.89□□□□□ -0.67
NXF1-211ENST00000531709 OR2A25A4D2G3 310 aa10.89□□□□□ -0.67
NXF1-211ENST00000531709 TMEM221A6NGB7 291 aa10.89□□□□□ -0.67
NXF1-211ENST00000531709 CDK1P06493 297 aa10.89□□□□□ -0.67
NXF1-211ENST00000531709 HOXC8P31273 242 aa10.89□□□□□ -0.67
NXF1-211ENST00000531709 TIA1P31483 386 aaKnown RBP eCLIP10.89□□□□□ -0.67
NXF1-211ENST00000531709 XKP51811 444 aa10.89□□□□□ -0.67
NXF1-211ENST00000531709 PTSQ03393 145 aa10.89□□□□□ -0.67
NXF1-211ENST00000531709 PTGES3Q15185 160 aaKnown RBP10.89□□□□□ -0.67
NXF1-211ENST00000531709 CRTC2Q53ET0 693 aaPredicted RBP10.89□□□□□ -0.67
NXF1-211ENST00000531709 GPAT3Q53EU6 434 aa10.89□□□□□ -0.67
NXF1-211ENST00000531709 RPS26P11Q5JNZ5 115 aaPredicted RBP10.89□□□□□ -0.67
NXF1-211ENST00000531709 ZNF783Q6ZMS7 281 aa10.89□□□□□ -0.67
NXF1-211ENST00000531709 ZNF517Q6ZMY9 492 aaPredicted RBP10.89□□□□□ -0.67
NXF1-211ENST00000531709 OTOP2Q7RTS6 562 aa10.89□□□□□ -0.67
NXF1-211ENST00000531709 CELF2-AS1Q8N7Q2 184 aa10.89□□□□□ -0.67
NXF1-211ENST00000531709 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.89□□□□□ -0.67
NXF1-211ENST00000531709 CD99L2Q8TCZ2 262 aa10.89□□□□□ -0.67
NXF1-211ENST00000531709 OR5M11Q96RB7 305 aa10.89□□□□□ -0.67
NXF1-211ENST00000531709 ZNF300Q96RE9 604 aaPredicted RBP10.89□□□□□ -0.67
NXF1-211ENST00000531709 SORBS1Q9BX66 1292 aaKnown RBP10.89□□□□□ -0.67
NXF1-211ENST00000531709 RPRD1BQ9NQG5 326 aaKnown RBP10.89□□□□□ -0.67
NXF1-211ENST00000531709 LEFTY1O75610 366 aa10.88□□□□□ -0.67
NXF1-211ENST00000531709 ZDHHC11BP0C7U3 371 aa10.88□□□□□ -0.67
NXF1-211ENST00000531709 CD9P21926 228 aa10.88□□□□□ -0.67
NXF1-211ENST00000531709 RORCP51449 518 aa10.88□□□□□ -0.67
NXF1-211ENST00000531709 RPS7P62081 194 aaKnown RBP10.88□□□□□ -0.67
NXF1-211ENST00000531709 SCN1BQ07699 218 aa10.88□□□□□ -0.67
NXF1-211ENST00000531709 TMEM115Q12893 351 aaPredicted RBP10.88□□□□□ -0.67
NXF1-211ENST00000531709 CLEC12AQ5QGZ9 265 aa10.88□□□□□ -0.67
NXF1-211ENST00000531709 PLEKHS1Q5SXH7 462 aa10.88□□□□□ -0.67
NXF1-211ENST00000531709 ZNF697Q5TEC3 545 aa10.88□□□□□ -0.67
NXF1-211ENST00000531709 ZDHHC20Q5W0Z9 365 aa10.88□□□□□ -0.67
NXF1-211ENST00000531709 KLHL17Q6TDP4 642 aa10.88□□□□□ -0.67
NXF1-211ENST00000531709 ZNF852Q6ZMS4 543 aa10.88□□□□□ -0.67
NXF1-211ENST00000531709 CHPFQ8IZ52 775 aa10.88□□□□□ -0.67
NXF1-211ENST00000531709 OXR1Q8N573 874 aa10.88□□□□□ -0.67
NXF1-211ENST00000531709 NEIL2Q969S2 332 aa10.88□□□□□ -0.67
NXF1-211ENST00000531709 COL26A1Q96A83 441 aa10.88□□□□□ -0.67
NXF1-211ENST00000531709 CRELD1Q96HD1 420 aa10.88□□□□□ -0.67
NXF1-211ENST00000531709 IL17FQ96PD4 163 aa10.88□□□□□ -0.67
NXF1-211ENST00000531709 TTYH2Q9BSA4 534 aa10.88□□□□□ -0.67
NXF1-211ENST00000531709 ATP6V1HQ9UI12 483 aa10.88□□□□□ -0.67
NXF1-211ENST00000531709 FBXO10Q9UK96 956 aa10.88□□□□□ -0.67
NXF1-211ENST00000531709 DNMT3AQ9Y6K1 912 aaPredicted RBP10.88□□□□□ -0.67
NXF1-211ENST00000531709 NUMA1Q14980 2115 aa10.88□□□□□ -0.67
NXF1-211ENST00000531709 PLXNA1Q9UIW2 1896 aa10.88□□□□□ -0.67
NXF1-211ENST00000531709 TTC34A8MYJ7 566 aa10.88□□□□□ -0.67
NXF1-211ENST00000531709 DYRK3O43781 588 aa10.88□□□□□ -0.67
NXF1-211ENST00000531709 PRMT3O60678 531 aa10.88□□□□□ -0.67
NXF1-211ENST00000531709 HMGA1P17096 107 aaKnown RBP10.88□□□□□ -0.67
NXF1-211ENST00000531709 CTGFP29279 349 aa10.88□□□□□ -0.67
NXF1-211ENST00000531709 PDHA2P29803 388 aa10.88□□□□□ -0.67
NXF1-211ENST00000531709 IL12RB1P42701 662 aa10.88□□□□□ -0.67
NXF1-211ENST00000531709 VEZF1Q14119 521 aa10.88□□□□□ -0.67
NXF1-211ENST00000531709 KRT78Q8N1N4 520 aa10.88□□□□□ -0.67
NXF1-211ENST00000531709 DNAJC22Q8N4W6 341 aa10.88□□□□□ -0.67
NXF1-211ENST00000531709 BCL7BQ9BQE9 202 aa10.88□□□□□ -0.67
NXF1-211ENST00000531709 TP63Q9H3D4 680 aaPredicted RBP10.88□□□□□ -0.67
NXF1-211ENST00000531709 TBC1D17Q9HA65 648 aa10.88□□□□□ -0.67
NXF1-211ENST00000531709 CCDC177Q9NQR7 707 aaPredicted RBP10.88□□□□□ -0.67
NXF1-211ENST00000531709 STOX2Q9P2F5 926 aaPredicted RBP10.88□□□□□ -0.67
NXF1-211ENST00000531709 CCL27Q9Y4X3 112 aa10.88□□□□□ -0.67
NXF1-211ENST00000531709 TMEM202A6NGA9 273 aa10.88□□□□□ -0.67
NXF1-211ENST00000531709 CLDN24A6NM45 220 aa10.88□□□□□ -0.67
NXF1-211ENST00000531709 TNFRSF21O75509 655 aa10.88□□□□□ -0.67
NXF1-211ENST00000531709 CD160O95971 181 aa10.88□□□□□ -0.67
NXF1-211ENST00000531709 IL3P08700 152 aa10.88□□□□□ -0.67
NXF1-211ENST00000531709 ADORA3P0DMS8 318 aa10.88□□□□□ -0.67
NXF1-211ENST00000531709 ALPPL2P10696 532 aa10.88□□□□□ -0.67
NXF1-211ENST00000531709 GPX2P18283 190 aa10.88□□□□□ -0.67
NXF1-211ENST00000531709 LHCGRP22888 699 aa10.88□□□□□ -0.67
NXF1-211ENST00000531709 RPL3P39023 403 aaKnown RBP10.88□□□□□ -0.67
NXF1-211ENST00000531709 SLC19A1P41440 591 aa10.88□□□□□ -0.67
NXF1-211ENST00000531709 MICAQ29983 383 aa10.88□□□□□ -0.67
NXF1-211ENST00000531709 C5orf22Q49AR2 442 aa10.88□□□□□ -0.67
NXF1-211ENST00000531709 PLET1Q6UQ28 207 aa10.88□□□□□ -0.67
NXF1-211ENST00000531709 COMMD6Q7Z4G1 85 aa10.88□□□□□ -0.67
NXF1-211ENST00000531709 C7orf57Q8NEG2 295 aa10.88□□□□□ -0.67
NXF1-211ENST00000531709 KLHL6Q8WZ60 621 aa10.88□□□□□ -0.67
NXF1-211ENST00000531709 TIFAQ96CG3 184 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms