RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 BRF2Q9HAW0 419 aa9.74□□□□□ -0.85
MCF2-209ENST00000520602 TUBA8Q9NY65 449 aaPredicted RBP9.74□□□□□ -0.85
MCF2-209ENST00000520602 CDH7Q9ULB5 785 aa9.74□□□□□ -0.85
MCF2-209ENST00000520602 ETHE1O95571 254 aa9.73□□□□□ -0.85
MCF2-209ENST00000520602 HOXA9P31269 272 aa9.73□□□□□ -0.85
MCF2-209ENST00000520602 SHMT2P34897 504 aa9.73□□□□□ -0.85
MCF2-209ENST00000520602 KRT20P35900 424 aa9.73□□□□□ -0.85
MCF2-209ENST00000520602 UGT2B15P54855 530 aa9.73□□□□□ -0.85
MCF2-209ENST00000520602 HTRA4P83105 476 aaPredicted RBP9.73□□□□□ -0.85
MCF2-209ENST00000520602 LASP1Q14847 261 aaKnown RBP9.73□□□□□ -0.85
MCF2-209ENST00000520602 DGUOKQ16854 277 aa9.73□□□□□ -0.85
MCF2-209ENST00000520602 DCST1Q5T197 706 aa9.73□□□□□ -0.85
MCF2-209ENST00000520602 FAM109BQ6ICB4 259 aaPredicted RBP9.73□□□□□ -0.85
MCF2-209ENST00000520602 LMLNQ96KR4 655 aa9.73□□□□□ -0.85
MCF2-209ENST00000520602 TMEM121BQ9BXQ6 578 aaPredicted RBP9.73□□□□□ -0.85
MCF2-209ENST00000520602 DPEP2Q9H4A9 486 aa9.73□□□□□ -0.85
MCF2-209ENST00000520602 WDR70Q9NW82 654 aa9.73□□□□□ -0.85
MCF2-209ENST00000520602 CLN6Q9NWW5 311 aa9.73□□□□□ -0.85
MCF2-209ENST00000520602 ENOPH1Q9UHY7 261 aa9.73□□□□□ -0.85
MCF2-209ENST00000520602 ACSL5Q9ULC5 683 aa9.73□□□□□ -0.85
MCF2-209ENST00000520602 TCRBV5S2A0A599 114 aa9.73□□□□□ -0.85
MCF2-209ENST00000520602 ZNF99A8MXY4 864 aaPredicted RBP9.73□□□□□ -0.85
MCF2-209ENST00000520602 RNGTTO60942 597 aaKnown RBP9.73□□□□□ -0.85
MCF2-209ENST00000520602 UGT2B17O75795 530 aa9.73□□□□□ -0.85
MCF2-209ENST00000520602 KLF8O95600 359 aaPredicted RBP9.73□□□□□ -0.85
MCF2-209ENST00000520602 TCF3P15923 654 aa9.73□□□□□ -0.85
MCF2-209ENST00000520602 STT3AP46977 705 aa9.73□□□□□ -0.85
MCF2-209ENST00000520602 RPS21P63220 83 aaKnown RBP9.73□□□□□ -0.85
MCF2-209ENST00000520602 RPP38P78345 283 aaKnown RBP9.73□□□□□ -0.85
MCF2-209ENST00000520602 MESP2Q0VG99 397 aa9.73□□□□□ -0.85
MCF2-209ENST00000520602 NR1D2Q14995 579 aa9.73□□□□□ -0.85
MCF2-209ENST00000520602 C1orf53Q5VUE5 145 aa9.73□□□□□ -0.85
MCF2-209ENST00000520602 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.73□□□□□ -0.85
MCF2-209ENST00000520602 CCDC116Q8IYX3 515 aa9.73□□□□□ -0.85
MCF2-209ENST00000520602 ADAMTS15Q8TE58 950 aa9.73□□□□□ -0.85
MCF2-209ENST00000520602 SETD7Q8WTS6 366 aaKnown RBP9.73□□□□□ -0.85
MCF2-209ENST00000520602 ZFAND2BQ8WV99 257 aa9.73□□□□□ -0.85
MCF2-209ENST00000520602 MRGPRX3Q96LB0 322 aa9.73□□□□□ -0.85
MCF2-209ENST00000520602 OR4K3Q96R72 315 aa9.73□□□□□ -0.85
MCF2-209ENST00000520602 UHRF1Q96T88 793 aaPredicted RBP9.73□□□□□ -0.85
MCF2-209ENST00000520602 FEVQ99581 238 aa9.73□□□□□ -0.85
MCF2-209ENST00000520602 SMAD5Q99717 465 aaKnown RBP9.73□□□□□ -0.85
MCF2-209ENST00000520602 DPH7Q9BTV6 452 aa9.73□□□□□ -0.85
MCF2-209ENST00000520602 OSBPL10Q9BXB5 764 aa9.73□□□□□ -0.85
MCF2-209ENST00000520602 CCNB1IP1Q9NPC3 277 aa9.73□□□□□ -0.85
MCF2-209ENST00000520602 GDE1Q9NZC3 331 aa9.73□□□□□ -0.85
MCF2-209ENST00000520602 ERVK-18Q9QC07 812 aa9.73□□□□□ -0.85
MCF2-209ENST00000520602 PIKFYVEQ9Y2I7 2098 aa9.73□□□□□ -0.85
MCF2-209ENST00000520602 PNMA8CA0A1B0GUJ8 204 aa9.73□□□□□ -0.85
MCF2-209ENST00000520602 ANKRD28O15084 1053 aa9.73□□□□□ -0.85
MCF2-209ENST00000520602 VILLO15195 856 aa9.73□□□□□ -0.85
MCF2-209ENST00000520602 MAP2K4P45985 399 aa9.73□□□□□ -0.85
MCF2-209ENST00000520602 VLDLRP98155 873 aa9.73□□□□□ -0.85
MCF2-209ENST00000520602 WSCD2Q2TBF2 565 aa9.73□□□□□ -0.85
MCF2-209ENST00000520602 MFSD4BQ5TF39 518 aa9.73□□□□□ -0.85
MCF2-209ENST00000520602 SERPINA11Q86U17 422 aa9.73□□□□□ -0.85
MCF2-209ENST00000520602 PLPP6Q8IY26 295 aa9.73□□□□□ -0.85
MCF2-209ENST00000520602 OR56A3Q8NH54 315 aa9.73□□□□□ -0.85
MCF2-209ENST00000520602 DOK4Q8TEW6 326 aa9.73□□□□□ -0.85
MCF2-209ENST00000520602 GEMIN6Q8WXD5 167 aaKnown RBP9.73□□□□□ -0.85
MCF2-209ENST00000520602 HDAC2Q92769 488 aaKnown RBP9.73□□□□□ -0.85
MCF2-209ENST00000520602 RERGQ96A58 199 aaPredicted RBP9.73□□□□□ -0.85
MCF2-209ENST00000520602 RIPOR3Q96MK2 946 aa9.73□□□□□ -0.85
MCF2-209ENST00000520602 LRRC3BQ96PB8 259 aa9.73□□□□□ -0.85
MCF2-209ENST00000520602 ZNF347Q96SE7 839 aa9.73□□□□□ -0.85
MCF2-209ENST00000520602 SLC17A9Q9BYT1 436 aa9.73□□□□□ -0.85
MCF2-209ENST00000520602 SLC6A16Q9GZN6 736 aa9.73□□□□□ -0.85
MCF2-209ENST00000520602 SLC6A17Q9H1V8 727 aa9.73□□□□□ -0.85
MCF2-209ENST00000520602 MAGIXQ9H6Y5 334 aa9.73□□□□□ -0.85
MCF2-209ENST00000520602 C3orf14Q9HBI5 128 aa9.73□□□□□ -0.85
MCF2-209ENST00000520602 WBP1LQ9NX94 342 aa9.73□□□□□ -0.85
MCF2-209ENST00000520602 BTBD3Q9Y2F9 522 aa9.73□□□□□ -0.85
MCF2-209ENST00000520602 CEPT1Q9Y6K0 416 aa9.73□□□□□ -0.85
MCF2-209ENST00000520602 MOSPD3O75425 235 aa9.72□□□□□ -0.85
MCF2-209ENST00000520602 KCNK5O95279 499 aa9.72□□□□□ -0.85
MCF2-209ENST00000520602 SOX14O95416 240 aa9.72□□□□□ -0.85
MCF2-209ENST00000520602 ADH1BP00325 375 aa9.72□□□□□ -0.85
MCF2-209ENST00000520602 ANXA8P13928 327 aa9.72□□□□□ -0.85
MCF2-209ENST00000520602 SLC5A2P31639 672 aa9.72□□□□□ -0.85
MCF2-209ENST00000520602 ENTPD1P49961 510 aa9.72□□□□□ -0.85
MCF2-209ENST00000520602 CLDN2P57739 230 aa9.72□□□□□ -0.85
MCF2-209ENST00000520602 BTN3A2P78410 334 aa9.72□□□□□ -0.85
MCF2-209ENST00000520602 ILF3Q12906 894 aaKnown RBP eCLIP9.72□□□□□ -0.85
MCF2-209ENST00000520602 ZNF630Q2M218 657 aaPredicted RBP9.72□□□□□ -0.85
MCF2-209ENST00000520602 KHDRBS2Q5VWX1 349 aaKnown RBP9.72□□□□□ -0.85
MCF2-209ENST00000520602 KIAA1614Q5VZ46 1190 aa9.72□□□□□ -0.85
MCF2-209ENST00000520602 TYW3Q6IPR3 259 aaKnown RBP9.72□□□□□ -0.85
MCF2-209ENST00000520602 PDZD3Q86UT5 571 aa9.72□□□□□ -0.85
MCF2-209ENST00000520602 RAB2BQ8WUD1 216 aa9.72□□□□□ -0.85
MCF2-209ENST00000520602 RDH12Q96NR8 316 aa9.72□□□□□ -0.85
MCF2-209ENST00000520602 SPATA5L1Q9BVQ7 753 aa9.72□□□□□ -0.85
MCF2-209ENST00000520602 BHLHE41Q9C0J9 482 aaPredicted RBP9.72□□□□□ -0.85
MCF2-209ENST00000520602 IL1RAPQ9NPH3 570 aa9.72□□□□□ -0.85
MCF2-209ENST00000520602 PPIL1Q9Y3C6 166 aa9.72□□□□□ -0.85
MCF2-209ENST00000520602 IGLV3-16A0A075B6K0 115 aa9.72□□□□□ -0.85
MCF2-209ENST00000520602 HOXC11O43248 304 aaPredicted RBP9.72□□□□□ -0.85
MCF2-209ENST00000520602 HPRP00739 348 aa9.72□□□□□ -0.85
MCF2-209ENST00000520602 GRSF1Q12849 480 aaKnown RBP eCLIP9.72□□□□□ -0.85
MCF2-209ENST00000520602 TARDBPQ13148 414 aaKnown RBP eCLIP9.72□□□□□ -0.85
MCF2-209ENST00000520602 SCN5AQ14524 2016 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms