RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 CCNDBP1O95273 360 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 DIRAS3O95661 229 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 LDOC1O95751 146 aaPredicted RBP2.66□□□□□ -1.98
SKP1-204ENST00000517691 ONECUT2O95948 504 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 EIF2S1P05198 315 aaKnown RBP2.66□□□□□ -1.98
SKP1-204ENST00000517691 HOXC4P09017 264 aaPredicted RBP2.66□□□□□ -1.98
SKP1-204ENST00000517691 RALBP11234 206 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 CD59P13987 128 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 NCF1P14598 390 aaPredicted RBP2.66□□□□□ -1.98
SKP1-204ENST00000517691 TPSB2P20231 275 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 MSH3P20585 1137 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 ITGALP20701 1170 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 CD9P21926 228 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 IL10P22301 178 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 MGAT1P26572 445 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 APEX1P27695 318 aaKnown RBP2.66□□□□□ -1.98
SKP1-204ENST00000517691 MC5RP33032 325 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 BSGP35613 385 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 CASP3P42574 277 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 NOVA1P51513 510 aaKnown RBP2.66□□□□□ -1.98
SKP1-204ENST00000517691 GBX2P52951 348 aaPredicted RBP2.66□□□□□ -1.98
SKP1-204ENST00000517691 UCP3P55916 312 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 DCDC1P59894 354 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 PRAMEP78395 509 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 IL13RA1P78552 427 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 SIM1P81133 766 aaPredicted RBP2.66□□□□□ -1.98
SKP1-204ENST00000517691 CDK16Q00536 496 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 PMP22Q01453 160 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 ILF3Q12906 894 aaKnown RBP eCLIP2.66□□□□□ -1.98
SKP1-204ENST00000517691 RAB32Q13637 225 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 ITGA9Q13797 1035 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 DHX34Q14147 1143 aaKnown RBP2.66□□□□□ -1.98
SKP1-204ENST00000517691 KCNJ11Q14654 390 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 RAB39AQ14964 217 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 ELOCQ15369 112 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 SHBQ15464 509 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 TRADDQ15628 312 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 TRIP6Q15654 476 aaKnown RBP2.66□□□□□ -1.98
SKP1-204ENST00000517691 TPSAB1Q15661 275 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 DEFB133Q30KQ1 61 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 ATP13A5Q4VNC0 1218 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 SLC9B1Q4ZJI4 515 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 PCID2Q5JVF3 399 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 LDLRAP1Q5SW96 308 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 PHF19Q5T6S3 580 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 HENMT1Q5T8I9 393 aaKnown RBP2.66□□□□□ -1.98
SKP1-204ENST00000517691 GKAP1Q5VSY0 366 aaPredicted RBP2.66□□□□□ -1.98
SKP1-204ENST00000517691 ANKRD22Q5VYY1 191 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 KCTD16Q68DU8 428 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 PLAG1Q6DJT9 500 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 LRRC8BQ6P9F7 803 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 CES3Q6UWW8 571 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 NLRP9Q7RTR0 991 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 DGLUCYQ7Z3D6 616 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 KCTD20Q7Z5Y7 419 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 ADCK1Q86TW2 530 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 HOOK3Q86VS8 718 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 GKN2Q86XP6 184 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 BCL6BQ8N143 479 aaPredicted RBP2.66□□□□□ -1.98
SKP1-204ENST00000517691 SLC25A45Q8N413 288 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 FSTL5Q8N475 847 aaPredicted RBP2.66□□□□□ -1.98
SKP1-204ENST00000517691 CDYL2Q8N8U2 506 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 DTX3Q8N9I9 347 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 ANKRD53Q8N9V6 530 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 ZNF548Q8NEK5 533 aaPredicted RBP2.66□□□□□ -1.98
SKP1-204ENST00000517691 FAM46DQ8NEK8 389 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 GPR156Q8NFN8 814 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 CCL4L1Q8NHW4 92 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 SUN5Q8TC36 379 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 CALML6Q8TD86 181 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 SAP25Q8TEE9 199 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 DUSP19Q8WTR2 217 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 CPT1BQ92523 772 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 GLYATL1Q969I3 302 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 NACC2Q96BF6 587 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 PDXPQ96GD0 296 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 LINC00615Q96LM1 132 aaPredicted RBP2.66□□□□□ -1.98
SKP1-204ENST00000517691 PLEKHG4BQ96PX9 1271 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 INTS14Q96SY0 518 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 TRIM51Q9BSJ1 452 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 B3GNT4Q9C0J1 378 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 TMEM168Q9H0V1 697 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 OR10A5Q9H207 317 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 DPEP2Q9H4A9 486 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 OSGEPL1Q9H4B0 414 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 ASB8Q9H765 288 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 FGF22Q9HCT0 170 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 PALMDQ9NP74 551 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 CHRAC1Q9NRG0 131 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 ATAD3AQ9NVI7 634 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 NLE1Q9NVX2 485 aaPredicted RBP2.66□□□□□ -1.98
SKP1-204ENST00000517691 KCMF1Q9P0J7 381 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 ATXN10Q9UBB4 475 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 SLC2A6Q9UGQ3 507 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 PCYOX1Q9UHG3 505 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 MAGEL2Q9UJ55 1249 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 CRLS1Q9UJA2 301 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 CNOT6Q9ULM6 557 aaKnown RBP2.66□□□□□ -1.98
SKP1-204ENST00000517691 SLC17A4Q9Y2C5 497 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 BTBD3Q9Y2F9 522 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms