RNA–Protein interactions for RNA: ENST00000516259.1

RNU6-390P-201, Transcript of RNA, U6 small nuclear 390, pseudogene, humanhuman

BASIC

Gene RNU6-390P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-390P-201ENST00000516259 GK2Q14410 553 aaPredicted RBP2.88□□□□□ -1.95
RNU6-390P-201ENST00000516259 GTDC1Q4AE62 458 aa2.88□□□□□ -1.95
RNU6-390P-201ENST00000516259 ATP1A1-AS1Q5TC04 95 aa2.88□□□□□ -1.95
RNU6-390P-201ENST00000516259 STPG1Q5TH74 334 aa2.88□□□□□ -1.95
RNU6-390P-201ENST00000516259 C1orf189Q5VU69 101 aa2.88□□□□□ -1.95
RNU6-390P-201ENST00000516259 CDHR3Q6ZTQ4 885 aa2.88□□□□□ -1.95
RNU6-390P-201ENST00000516259 NLRP14Q86W24 1093 aa2.88□□□□□ -1.95
RNU6-390P-201ENST00000516259 THEM5Q8N1Q8 247 aa2.88□□□□□ -1.95
RNU6-390P-201ENST00000516259 DCLK2Q8N568 766 aa2.88□□□□□ -1.95
RNU6-390P-201ENST00000516259 GPRC5AQ8NFJ5 357 aa2.88□□□□□ -1.95
RNU6-390P-201ENST00000516259 DOCK7Q96N67 2140 aa2.88□□□□□ -1.95
RNU6-390P-201ENST00000516259 PGLYRP2Q96PD5 576 aa2.88□□□□□ -1.95
RNU6-390P-201ENST00000516259 TMEM237Q96Q45 408 aa2.88□□□□□ -1.95
RNU6-390P-201ENST00000516259 KCNK16Q96T55 309 aa2.88□□□□□ -1.95
RNU6-390P-201ENST00000516259 NYXQ9GZU5 481 aa2.88□□□□□ -1.95
RNU6-390P-201ENST00000516259 GANQ9H2C0 597 aa2.88□□□□□ -1.95
RNU6-390P-201ENST00000516259 SLC52A3Q9NQ40 469 aa2.88□□□□□ -1.95
RNU6-390P-201ENST00000516259 POLKQ9UBT6 870 aa2.88□□□□□ -1.95
RNU6-390P-201ENST00000516259 HOOK1Q9UJC3 728 aaKnown RBP2.88□□□□□ -1.95
RNU6-390P-201ENST00000516259 DNPEPQ9ULA0 475 aa2.88□□□□□ -1.95
RNU6-390P-201ENST00000516259 ICAM5Q9UMF0 924 aa2.88□□□□□ -1.95
RNU6-390P-201ENST00000516259 PIN4Q9Y237 131 aaKnown RBP2.88□□□□□ -1.95
RNU6-390P-201ENST00000516259 PPP2R2CQ9Y2T4 447 aa2.88□□□□□ -1.95
RNU6-390P-201ENST00000516259 NSG2Q9Y328 171 aa2.88□□□□□ -1.95
RNU6-390P-201ENST00000516259 TMED7Q9Y3B3 224 aa2.88□□□□□ -1.95
RNU6-390P-201ENST00000516259 COLEC10Q9Y6Z7 277 aa2.88□□□□□ -1.95
RNU6-390P-201ENST00000516259 UBE4BO95155 1302 aa2.88□□□□□ -1.95
RNU6-390P-201ENST00000516259 STK36Q9NRP7 1315 aa2.88□□□□□ -1.95
RNU6-390P-201ENST00000516259 hCG_38984A0A1B0GV85 526 aa2.87□□□□□ -1.95
RNU6-390P-201ENST00000516259 SYCE3A1L190 88 aa2.87□□□□□ -1.95
RNU6-390P-201ENST00000516259 TCP10L2B9ZVM9 353 aa2.87□□□□□ -1.95
RNU6-390P-201ENST00000516259 RTCAO00442 366 aaKnown RBP2.87□□□□□ -1.95
RNU6-390P-201ENST00000516259 FPGTO14772 594 aa2.87□□□□□ -1.95
RNU6-390P-201ENST00000516259 MAGEB2O15479 319 aa2.87□□□□□ -1.95
RNU6-390P-201ENST00000516259 CSDE1O75534 798 aaKnown RBP2.87□□□□□ -1.95
RNU6-390P-201ENST00000516259 CPNE6O95741 557 aa2.87□□□□□ -1.95
RNU6-390P-201ENST00000516259 PGK2P07205 417 aa2.87□□□□□ -1.95
RNU6-390P-201ENST00000516259 ODC1P11926 461 aa2.87□□□□□ -1.95
RNU6-390P-201ENST00000516259 CPA3P15088 417 aa2.87□□□□□ -1.95
RNU6-390P-201ENST00000516259 ARF4P18085 180 aaPredicted RBP2.87□□□□□ -1.95
RNU6-390P-201ENST00000516259 ACKR3P25106 362 aa2.87□□□□□ -1.95
RNU6-390P-201ENST00000516259 CCND2P30279 289 aa2.87□□□□□ -1.95
RNU6-390P-201ENST00000516259 OR1D2P34982 312 aa2.87□□□□□ -1.95
RNU6-390P-201ENST00000516259 NSFP46459 744 aaKnown RBP2.87□□□□□ -1.95
RNU6-390P-201ENST00000516259 NDST2P52849 883 aa2.87□□□□□ -1.95
RNU6-390P-201ENST00000516259 ATXN3P54252 364 aaPredicted RBP2.87□□□□□ -1.95
RNU6-390P-201ENST00000516259 LINC01547P58512 204 aaPredicted RBP2.87□□□□□ -1.95
RNU6-390P-201ENST00000516259 GNB1P62873 340 aa2.87□□□□□ -1.95
RNU6-390P-201ENST00000516259 CNTN1Q12860 1018 aa2.87□□□□□ -1.95
RNU6-390P-201ENST00000516259 SPHARQ15513 63 aa2.87□□□□□ -1.95
RNU6-390P-201ENST00000516259 INAQ16352 499 aa2.87□□□□□ -1.95
RNU6-390P-201ENST00000516259 ARHGAP17Q68EM7 881 aa2.87□□□□□ -1.95
RNU6-390P-201ENST00000516259 SNRNP48Q6IEG0 339 aaKnown RBP2.87□□□□□ -1.95
RNU6-390P-201ENST00000516259 RBM43Q6ZSC3 357 aaKnown RBP2.87□□□□□ -1.95
RNU6-390P-201ENST00000516259 RFPL4BQ6ZWI9 263 aa2.87□□□□□ -1.95
RNU6-390P-201ENST00000516259 ERC1Q8IUD2 1116 aa2.87□□□□□ -1.95
RNU6-390P-201ENST00000516259 LACC1Q8IV20 430 aa2.87□□□□□ -1.95
RNU6-390P-201ENST00000516259 STHQ8IWL8 128 aa2.87□□□□□ -1.95
RNU6-390P-201ENST00000516259 ELMOD2Q8IZ81 293 aa2.87□□□□□ -1.95
RNU6-390P-201ENST00000516259 ELMOD1Q8N336 334 aa2.87□□□□□ -1.95
RNU6-390P-201ENST00000516259 KDM8Q8N371 416 aa2.87□□□□□ -1.95
RNU6-390P-201ENST00000516259 COLGALT1Q8NBJ5 622 aa2.87□□□□□ -1.95
RNU6-390P-201ENST00000516259 ARHGAP45Q92619 1136 aa2.87□□□□□ -1.95
RNU6-390P-201ENST00000516259 AZIN2Q96A70 460 aa2.87□□□□□ -1.95
RNU6-390P-201ENST00000516259 RFT1Q96AA3 541 aa2.87□□□□□ -1.95
RNU6-390P-201ENST00000516259 DTD2Q96FN9 168 aa2.87□□□□□ -1.95
RNU6-390P-201ENST00000516259 GMPPAQ96IJ6 420 aaPredicted RBP2.87□□□□□ -1.95
RNU6-390P-201ENST00000516259 ZNF560Q96MR9 790 aa2.87□□□□□ -1.95
RNU6-390P-201ENST00000516259 GPR137Q96N19 417 aa2.87□□□□□ -1.95
RNU6-390P-201ENST00000516259 PAPOLGQ9BWT3 736 aaKnown RBP2.87□□□□□ -1.95
RNU6-390P-201ENST00000516259 FTHL17Q9BXU8 183 aa2.87□□□□□ -1.95
RNU6-390P-201ENST00000516259 CARD9Q9H257 536 aa2.87□□□□□ -1.95
RNU6-390P-201ENST00000516259 DPEP2Q9H4A9 486 aa2.87□□□□□ -1.95
RNU6-390P-201ENST00000516259 SYTL2Q9HCH5 934 aa2.87□□□□□ -1.95
RNU6-390P-201ENST00000516259 HOMER3Q9NSC5 361 aa2.87□□□□□ -1.95
RNU6-390P-201ENST00000516259 ZCCHC3Q9NUD5 404 aaKnown RBP2.87□□□□□ -1.95
RNU6-390P-201ENST00000516259 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP2.87□□□□□ -1.95
RNU6-390P-201ENST00000516259 WWOXQ9NZC7 414 aa2.87□□□□□ -1.95
RNU6-390P-201ENST00000516259 ZNF580Q9UK33 172 aa2.87□□□□□ -1.95
RNU6-390P-201ENST00000516259 PILRAQ9UKJ1 303 aa2.87□□□□□ -1.95
RNU6-390P-201ENST00000516259 PLEKHA6Q9Y2H5 1048 aa2.87□□□□□ -1.95
RNU6-390P-201ENST00000516259 WDR37Q9Y2I8 494 aa2.87□□□□□ -1.95
RNU6-390P-201ENST00000516259 STRAPQ9Y3F4 350 aaKnown RBP2.87□□□□□ -1.95
RNU6-390P-201ENST00000516259 MYH14Q7Z406 1995 aaKnown RBP2.87□□□□□ -1.95
RNU6-390P-201ENST00000516259 KIAA1217Q5T5P2 1943 aa2.86□□□□□ -1.95
RNU6-390P-201ENST00000516259 TRBV4-1A0A0J9YWV2 114 aa2.86□□□□□ -1.95
RNU6-390P-201ENST00000516259 MEIOCA2RUB1 952 aa2.86□□□□□ -1.95
RNU6-390P-201ENST00000516259 ARHGAP42A6NI28 874 aa2.86□□□□□ -1.95
RNU6-390P-201ENST00000516259 TLR4O00206 839 aa2.86□□□□□ -1.95
RNU6-390P-201ENST00000516259 CHUKO15111 745 aa2.86□□□□□ -1.95
RNU6-390P-201ENST00000516259 SURF4O15260 269 aa2.86□□□□□ -1.95
RNU6-390P-201ENST00000516259 PSMD3O43242 534 aa2.86□□□□□ -1.95
RNU6-390P-201ENST00000516259 HSF2BPO75031 334 aa2.86□□□□□ -1.95
RNU6-390P-201ENST00000516259 MTRF1O75570 445 aaKnown RBP2.86□□□□□ -1.95
RNU6-390P-201ENST00000516259 TRMUO75648 421 aaKnown RBP2.86□□□□□ -1.95
RNU6-390P-201ENST00000516259 STBD1O95210 358 aa2.86□□□□□ -1.95
RNU6-390P-201ENST00000516259 PATE4P0C8F1 98 aa2.86□□□□□ -1.95
RNU6-390P-201ENST00000516259 CCDC192P0DO97 292 aa2.86□□□□□ -1.95
RNU6-390P-201ENST00000516259 PCP11498 1178 aaKnown RBP2.86□□□□□ -1.95
RNU6-390P-201ENST00000516259 C4BPBP20851 252 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms