RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 EEF1A2Q05639 463 aaKnown RBP3.77□□□□□ -1.81
NEDD4-209ENST00000508871 PEX6Q13608 980 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 UGCGQ16739 394 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 DMRTC1Q5HYR2 192 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 HIST2H3PS2Q5TEC6 136 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 EEF1A1P5Q5VTE0 462 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 TMEM71Q6P5X7 295 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 DEGS2Q6QHC5 323 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 POTEGQ6S5H5 508 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 CBWD2Q8IUF1 395 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 DCBLD1Q8N8Z6 715 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 OR7D4Q8NG98 312 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 FANK1Q8TC84 345 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 PTCD3Q96EY7 689 aaKnown RBP3.77□□□□□ -1.81
NEDD4-209ENST00000508871 NACC1Q96RE7 527 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 PFDN5Q99471 154 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 CBWD1Q9BRT8 395 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 IKZF4Q9H2S9 585 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 TP63Q9H3D4 680 aaPredicted RBP3.77□□□□□ -1.81
NEDD4-209ENST00000508871 RIMS4Q9H426 269 aaPredicted RBP3.77□□□□□ -1.81
NEDD4-209ENST00000508871 ST6GALNAC4Q9H4F1 302 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 L2HGDHQ9H9P8 463 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 SDHAF3Q9NRP4 125 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 RAB23Q9ULC3 237 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 M0QZ92 97 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 EI24O14681 340 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 MSH4O15457 936 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 CA12O43570 354 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 SMIM24O75264 130 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 RDH16O75452 317 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 CDC123O75794 336 aaPredicted RBP3.77□□□□□ -1.81
NEDD4-209ENST00000508871 TDP2O95551 362 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 VIPR1P32241 457 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 SFTPDP35247 375 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 TAGLN2P37802 199 aaKnown RBP3.77□□□□□ -1.81
NEDD4-209ENST00000508871 RGS4P49798 205 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 PKNOX1P55347 436 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 RAG2P55895 527 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 IKZF1Q13422 519 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 ADGRE1Q14246 886 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 IRF3Q14653 427 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 INAVAQ3KP66 663 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 SAMD4BQ5PRF9 694 aaKnown RBP3.77□□□□□ -1.81
NEDD4-209ENST00000508871 NCR3LG1Q68D85 454 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 CES3Q6UWW8 571 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 GLDNQ6ZMI3 551 aaPredicted RBP3.77□□□□□ -1.81
NEDD4-209ENST00000508871 LRRC74BQ6ZQY2 392 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 CHMP1BQ7LBR1 199 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 GPR180Q86V85 440 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.77□□□□□ -1.81
NEDD4-209ENST00000508871 BOLLQ8N9W6 283 aaKnown RBP3.77□□□□□ -1.81
NEDD4-209ENST00000508871 POC1BQ8TC44 478 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 CORO2AQ92828 525 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 CAVIN3Q969G5 261 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 OLFM3Q96PB7 478 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 MS4A10Q96PG2 267 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 SECISBP2Q96T21 854 aaKnown RBP3.77□□□□□ -1.81
NEDD4-209ENST00000508871 MYOCQ99972 504 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 APOL4Q9BPW4 351 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 MMP27Q9H306 513 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 FAM105AQ9NUU6 356 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 VSX1Q9NZR4 365 aaPredicted RBP3.77□□□□□ -1.81
NEDD4-209ENST00000508871 SLAMF8Q9P0V8 285 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 SUSD2Q9UGT4 822 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 ALG6Q9Y672 507 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 PDCD11Q14690 1871 aaKnown RBP3.76□□□□□ -1.81
NEDD4-209ENST00000508871 RECQL4O94761 1208 aa3.76□□□□□ -1.81
NEDD4-209ENST00000508871 PAPLNO95428 1278 aa3.76□□□□□ -1.81
NEDD4-209ENST00000508871 CALB1P05937 261 aa3.76□□□□□ -1.81
NEDD4-209ENST00000508871 ERCC1P07992 297 aaPredicted RBP3.76□□□□□ -1.81
NEDD4-209ENST00000508871 EPHB2P29323 1055 aa3.76□□□□□ -1.81
NEDD4-209ENST00000508871 RPS15P62841 145 aaKnown RBP3.76□□□□□ -1.81
NEDD4-209ENST00000508871 ANKRD39Q53RE8 183 aa3.76□□□□□ -1.81
NEDD4-209ENST00000508871 GRTP1Q5TC63 336 aa3.76□□□□□ -1.81
NEDD4-209ENST00000508871 DENND5BQ6ZUT9 1274 aa3.76□□□□□ -1.81
NEDD4-209ENST00000508871 TRABD2AQ86V40 505 aa3.76□□□□□ -1.81
NEDD4-209ENST00000508871 GSPT2Q8IYD1 628 aaKnown RBP3.76□□□□□ -1.81
NEDD4-209ENST00000508871 ZNF679Q8IYX0 411 aa3.76□□□□□ -1.81
NEDD4-209ENST00000508871 ELMOD2Q8IZ81 293 aa3.76□□□□□ -1.81
NEDD4-209ENST00000508871 ZNF781Q8N8C0 355 aa3.76□□□□□ -1.81
NEDD4-209ENST00000508871 NOA1Q8NC60 698 aaKnown RBP3.76□□□□□ -1.81
NEDD4-209ENST00000508871 OR4C15Q8NGM1 316 aa3.76□□□□□ -1.81
NEDD4-209ENST00000508871 LKAAEAR1Q8TD35 194 aa3.76□□□□□ -1.81
NEDD4-209ENST00000508871 C19orf60Q96EN9 201 aa3.76□□□□□ -1.81
NEDD4-209ENST00000508871 ERGIC2Q96RQ1 377 aa3.76□□□□□ -1.81
NEDD4-209ENST00000508871 LPIN3Q9BQK8 851 aa3.76□□□□□ -1.81
NEDD4-209ENST00000508871 WNT5BQ9H1J7 359 aa3.76□□□□□ -1.81
NEDD4-209ENST00000508871 IL21RQ9HBE5 538 aa3.76□□□□□ -1.81
NEDD4-209ENST00000508871 MYNNQ9NPC7 610 aa3.76□□□□□ -1.81
NEDD4-209ENST00000508871 CBY3A6NI87 242 aa3.76□□□□□ -1.81
NEDD4-209ENST00000508871 C3orf70A6NLC5 250 aaPredicted RBP3.76□□□□□ -1.81
NEDD4-209ENST00000508871 GFRA2O00451 464 aa3.76□□□□□ -1.81
NEDD4-209ENST00000508871 PDXKO00764 312 aa3.76□□□□□ -1.81
NEDD4-209ENST00000508871 CLDN4O14493 209 aa3.76□□□□□ -1.81
NEDD4-209ENST00000508871 DYRK3O43781 588 aa3.76□□□□□ -1.81
NEDD4-209ENST00000508871 USP2O75604 605 aaPredicted RBP3.76□□□□□ -1.81
NEDD4-209ENST00000508871 SYNGR4O95473 234 aa3.76□□□□□ -1.81
NEDD4-209ENST00000508871 C1SP09871 688 aa3.76□□□□□ -1.81
NEDD4-209ENST00000508871 NR2F1P10589 423 aa3.76□□□□□ -1.81
NEDD4-209ENST00000508871 VEGFAP15692 232 aaPredicted RBP3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms