RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 TSACCQ96A04 125 aaPredicted RBP4.16□□□□□ -1.74
TOPBP1-206ENST00000508524 TBC1D7Q9P0N9 293 aa4.16□□□□□ -1.74
TOPBP1-206ENST00000508524 TXNDC16Q9P2K2 825 aa4.16□□□□□ -1.74
TOPBP1-206ENST00000508524 EIF3AQ14152 1382 aaKnown RBP4.15□□□□□ -1.74
TOPBP1-206ENST00000508524 ANKRD36BQ8N2N9 1353 aa4.15□□□□□ -1.74
TOPBP1-206ENST00000508524 CCDC7Q96M83 1385 aa4.15□□□□□ -1.74
TOPBP1-206ENST00000508524 C4BP0C0L5 1744 aa4.15□□□□□ -1.74
TOPBP1-206ENST00000508524 POP4O95707 220 aaKnown RBP4.15□□□□□ -1.75
TOPBP1-206ENST00000508524 MMP10P09238 476 aa4.15□□□□□ -1.75
TOPBP1-206ENST00000508524 KRTAP1-4P0C5Y4 121 aa4.15□□□□□ -1.75
TOPBP1-206ENST00000508524 BCL3P20749 454 aa4.15□□□□□ -1.75
TOPBP1-206ENST00000508524 OXTRP30559 389 aa4.15□□□□□ -1.75
TOPBP1-206ENST00000508524 OR1D5P58170 312 aa4.15□□□□□ -1.75
TOPBP1-206ENST00000508524 CRY2Q49AN0 593 aa4.15□□□□□ -1.75
TOPBP1-206ENST00000508524 HIGD2BQ4VC39 106 aa4.15□□□□□ -1.75
TOPBP1-206ENST00000508524 SPECC1Q5M775 1068 aa4.15□□□□□ -1.75
TOPBP1-206ENST00000508524 ERMARDQ5T6L9 678 aa4.15□□□□□ -1.75
TOPBP1-206ENST00000508524 GPR139Q6DWJ6 353 aa4.15□□□□□ -1.75
TOPBP1-206ENST00000508524 CFAP161Q6P656 301 aa4.15□□□□□ -1.75
TOPBP1-206ENST00000508524 C3P1Q6ZMU1 363 aa4.15□□□□□ -1.75
TOPBP1-206ENST00000508524 ZNF841Q6ZN19 808 aa4.15□□□□□ -1.75
TOPBP1-206ENST00000508524 RBPMS2Q6ZRY4 209 aaKnown RBP4.15□□□□□ -1.75
TOPBP1-206ENST00000508524 ENOSF1Q7L5Y1 443 aa4.15□□□□□ -1.75
TOPBP1-206ENST00000508524 ANKRD13CQ8N6S4 541 aa4.15□□□□□ -1.75
TOPBP1-206ENST00000508524 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.15□□□□□ -1.75
TOPBP1-206ENST00000508524 XXYLT1Q8NBI6 393 aa4.15□□□□□ -1.75
TOPBP1-206ENST00000508524 OR10G7Q8NGN6 311 aa4.15□□□□□ -1.75
TOPBP1-206ENST00000508524 ACTL8Q9H568 366 aa4.15□□□□□ -1.75
TOPBP1-206ENST00000508524 HEXA-AS1Q9H8Q6 139 aa4.15□□□□□ -1.75
TOPBP1-206ENST00000508524 RAVER2Q9HCJ3 691 aaKnown RBP4.15□□□□□ -1.75
TOPBP1-206ENST00000508524 GPN1Q9HCN4 374 aaPredicted RBP4.15□□□□□ -1.75
TOPBP1-206ENST00000508524 TAF1LQ8IZX4 1826 aa4.15□□□□□ -1.75
TOPBP1-206ENST00000508524 ARFGEF1Q9Y6D6 1849 aa4.14□□□□□ -1.75
TOPBP1-206ENST00000508524 THSD7BQ9C0I4 1608 aa4.14□□□□□ -1.75
TOPBP1-206ENST00000508524 SHISA9B4DS77 424 aa4.14□□□□□ -1.75
TOPBP1-206ENST00000508524 SLC1A7O00341 560 aa4.14□□□□□ -1.75
TOPBP1-206ENST00000508524 ECE2O60344 883 aa4.14□□□□□ -1.75
TOPBP1-206ENST00000508524 OR52Z1P0C646 297 aa4.14□□□□□ -1.75
TOPBP1-206ENST00000508524 DNAH10OSP0CZ25 163 aa4.14□□□□□ -1.75
TOPBP1-206ENST00000508524 SELEP16581 610 aa4.14□□□□□ -1.75
TOPBP1-206ENST00000508524 AADACP22760 399 aa4.14□□□□□ -1.75
TOPBP1-206ENST00000508524 EEF1B2P24534 225 aaKnown RBP4.14□□□□□ -1.75
TOPBP1-206ENST00000508524 RBPJQ06330 500 aa4.14□□□□□ -1.75
TOPBP1-206ENST00000508524 MS4A18Q3C1V0 323 aa4.14□□□□□ -1.75
TOPBP1-206ENST00000508524 ARMC4Q5T2S8 1044 aa4.14□□□□□ -1.75
TOPBP1-206ENST00000508524 TLK2Q86UE8 772 aa4.14□□□□□ -1.75
TOPBP1-206ENST00000508524 PHC2Q8IXK0 858 aa4.14□□□□□ -1.75
TOPBP1-206ENST00000508524 BTBD9Q96Q07 612 aa4.14□□□□□ -1.75
TOPBP1-206ENST00000508524 GPR83Q9NYM4 423 aa4.14□□□□□ -1.75
TOPBP1-206ENST00000508524 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.14□□□□□ -1.75
TOPBP1-206ENST00000508524 NSD3Q9BZ95 1437 aa4.13□□□□□ -1.75
TOPBP1-206ENST00000508524 TIAM2Q8IVF5 1701 aa4.13□□□□□ -1.75
TOPBP1-206ENST00000508524 MEGF6O75095 1541 aa4.13□□□□□ -1.75
TOPBP1-206ENST00000508524 IGHV3-20A0A0C4DH32 117 aa4.13□□□□□ -1.75
TOPBP1-206ENST00000508524 GLTPD2A6NH11 291 aa4.13□□□□□ -1.75
TOPBP1-206ENST00000508524 A8MU10 97 aa4.13□□□□□ -1.75
TOPBP1-206ENST00000508524 ADRB2P07550 413 aa4.13□□□□□ -1.75
TOPBP1-206ENST00000508524 EDNRAP25101 427 aa4.13□□□□□ -1.75
TOPBP1-206ENST00000508524 ZFP36L2P47974 494 aaKnown RBP4.13□□□□□ -1.75
TOPBP1-206ENST00000508524 KRTAP12-2P59991 146 aa4.13□□□□□ -1.75
TOPBP1-206ENST00000508524 ILF2Q12905 390 aaKnown RBP4.13□□□□□ -1.75
TOPBP1-206ENST00000508524 C15orf32Q32M92 178 aa4.13□□□□□ -1.75
TOPBP1-206ENST00000508524 SUSD4Q5VX71 490 aa4.13□□□□□ -1.75
TOPBP1-206ENST00000508524 SEL1L3Q68CR1 1132 aa4.13□□□□□ -1.75
TOPBP1-206ENST00000508524 KRT39Q6A163 491 aa4.13□□□□□ -1.75
TOPBP1-206ENST00000508524 CDHR3Q6ZTQ4 885 aa4.13□□□□□ -1.75
TOPBP1-206ENST00000508524 OR4D10Q8NGI6 311 aa4.13□□□□□ -1.75
TOPBP1-206ENST00000508524 TOMM40LQ969M1 308 aa4.13□□□□□ -1.75
TOPBP1-206ENST00000508524 SPSB1Q96BD6 273 aa4.13□□□□□ -1.75
TOPBP1-206ENST00000508524 ZNF597Q96LX8 424 aa4.13□□□□□ -1.75
TOPBP1-206ENST00000508524 C1orf147Q96MC9 270 aaPredicted RBP4.13□□□□□ -1.75
TOPBP1-206ENST00000508524 NDNQ99608 321 aa4.13□□□□□ -1.75
TOPBP1-206ENST00000508524 CHCHD5Q9BSY4 110 aa4.13□□□□□ -1.75
TOPBP1-206ENST00000508524 SDCBP2Q9H190 292 aa4.13□□□□□ -1.75
TOPBP1-206ENST00000508524 TBC1D13Q9NVG8 400 aa4.13□□□□□ -1.75
TOPBP1-206ENST00000508524 HACD3Q9P035 362 aa4.13□□□□□ -1.75
TOPBP1-206ENST00000508524 TTC28Q96AY4 2481 aa4.13□□□□□ -1.75
TOPBP1-206ENST00000508524 CASP8AP2Q9UKL3 1982 aa4.13□□□□□ -1.75
TOPBP1-206ENST00000508524 IGLV3-10A0A075B6K4 115 aa4.12□□□□□ -1.75
TOPBP1-206ENST00000508524 IGLV4-3A0A075B6K6 122 aa4.12□□□□□ -1.75
TOPBP1-206ENST00000508524 IGHV3-38A0A0C4DH36 116 aa4.12□□□□□ -1.75
TOPBP1-206ENST00000508524 K7ENM7 598 aa4.12□□□□□ -1.75
TOPBP1-206ENST00000508524 CYTIPO60759 359 aa4.12□□□□□ -1.75
TOPBP1-206ENST00000508524 SERPING1P05155 500 aa4.12□□□□□ -1.75
TOPBP1-206ENST00000508524 IL11P20809 199 aa4.12□□□□□ -1.75
TOPBP1-206ENST00000508524 ACHEP22303 614 aa4.12□□□□□ -1.75
TOPBP1-206ENST00000508524 PIK3R1P27986 724 aa4.12□□□□□ -1.75
TOPBP1-206ENST00000508524 CETN2P41208 172 aa4.12□□□□□ -1.75
TOPBP1-206ENST00000508524 CAPZA2P47755 286 aa4.12□□□□□ -1.75
TOPBP1-206ENST00000508524 DLK1P80370 383 aa4.12□□□□□ -1.75
TOPBP1-206ENST00000508524 FCHO2Q0JRZ9 810 aa4.12□□□□□ -1.75
TOPBP1-206ENST00000508524 PTGISQ16647 500 aa4.12□□□□□ -1.75
TOPBP1-206ENST00000508524 LACTB2Q53H82 288 aaPredicted RBP4.12□□□□□ -1.75
TOPBP1-206ENST00000508524 CYB5D1Q6P9G0 228 aa4.12□□□□□ -1.75
TOPBP1-206ENST00000508524 CPEB2Q7Z5Q1 589 aaKnown RBP4.12□□□□□ -1.75
TOPBP1-206ENST00000508524 SLC25A42Q86VD7 318 aa4.12□□□□□ -1.75
TOPBP1-206ENST00000508524 TCEANCQ8N8B7 351 aa4.12□□□□□ -1.75
TOPBP1-206ENST00000508524 CHURC1Q8WUH1 139 aa4.12□□□□□ -1.75
TOPBP1-206ENST00000508524 NUDT16L1Q9BRJ7 211 aaKnown RBP4.12□□□□□ -1.75
TOPBP1-206ENST00000508524 CHMP4AQ9BY43 222 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms