RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 SDR42E2A6NKP2 422 aa2.12□□□□□ -2.07
HMGB1P35-201ENST00000503360 NPIPA3F8WFD2 350 aa2.12□□□□□ -2.07
HMGB1P35-201ENST00000503360 SLCO1B7G3V0H7 640 aa2.12□□□□□ -2.07
HMGB1P35-201ENST00000503360 VEGFDO43915 354 aa2.12□□□□□ -2.07
HMGB1P35-201ENST00000503360 MAGEC1O60732 1142 aa2.12□□□□□ -2.07
HMGB1P35-201ENST00000503360 SMPD2O60906 423 aa2.12□□□□□ -2.07
HMGB1P35-201ENST00000503360 PEX11AO75192 247 aa2.12□□□□□ -2.07
HMGB1P35-201ENST00000503360 NME6O75414 186 aaPredicted RBP2.12□□□□□ -2.07
HMGB1P35-201ENST00000503360 CRCPO75575 148 aa2.12□□□□□ -2.07
HMGB1P35-201ENST00000503360 REC8O95072 547 aa2.12□□□□□ -2.07
HMGB1P35-201ENST00000503360 SNX4O95219 450 aa2.12□□□□□ -2.07
HMGB1P35-201ENST00000503360 SLC16A8O95907 504 aa2.12□□□□□ -2.07
HMGB1P35-201ENST00000503360 GH1P01241 217 aa2.12□□□□□ -2.07
HMGB1P35-201ENST00000503360 IFNB1P01574 187 aa2.12□□□□□ -2.07
HMGB1P35-201ENST00000503360 VTNP04004 478 aa2.12□□□□□ -2.07
HMGB1P35-201ENST00000503360 YES1P07947 543 aa2.12□□□□□ -2.07
HMGB1P35-201ENST00000503360 CCDC192P0DO97 292 aa2.12□□□□□ -2.07
HMGB1P35-201ENST00000503360 CD59P13987 128 aa2.12□□□□□ -2.07
HMGB1P35-201ENST00000503360 CYP2A7P20853 494 aa2.12□□□□□ -2.07
HMGB1P35-201ENST00000503360 ASMTP46597 345 aa2.12□□□□□ -2.07
HMGB1P35-201ENST00000503360 OR3A1P47881 315 aa2.12□□□□□ -2.07
HMGB1P35-201ENST00000503360 CAMLGP49069 296 aa2.12□□□□□ -2.07
HMGB1P35-201ENST00000503360 NR0B1P51843 470 aaKnown RBP2.12□□□□□ -2.07
HMGB1P35-201ENST00000503360 ATXN3P54252 364 aaPredicted RBP2.12□□□□□ -2.07
HMGB1P35-201ENST00000503360 PAX9P55771 341 aa2.12□□□□□ -2.07
HMGB1P35-201ENST00000503360 CLDN17P56750 224 aa2.12□□□□□ -2.07
HMGB1P35-201ENST00000503360 ST8SIA6P61647 398 aa2.12□□□□□ -2.07
HMGB1P35-201ENST00000503360 ABRQ12979 859 aa2.12□□□□□ -2.07
HMGB1P35-201ENST00000503360 ITGA9Q13797 1035 aa2.12□□□□□ -2.07
HMGB1P35-201ENST00000503360 TMEM187Q14656 261 aa2.12□□□□□ -2.07
HMGB1P35-201ENST00000503360 TMEM132DQ14C87 1099 aa2.12□□□□□ -2.07
HMGB1P35-201ENST00000503360 PDK1Q15118 436 aa2.12□□□□□ -2.07
HMGB1P35-201ENST00000503360 ADAMTSL4-AS1Q5T5F5 129 aa2.12□□□□□ -2.07
HMGB1P35-201ENST00000503360 NHLRC1Q6VVB1 395 aa2.12□□□□□ -2.07
HMGB1P35-201ENST00000503360 LEKR1Q6ZMV7 388 aa2.12□□□□□ -2.07
HMGB1P35-201ENST00000503360 RGS9BPQ6ZS82 235 aa2.12□□□□□ -2.07
HMGB1P35-201ENST00000503360 RBM43Q6ZSC3 357 aaKnown RBP2.12□□□□□ -2.07
HMGB1P35-201ENST00000503360 KCTD9Q7L273 389 aa2.12□□□□□ -2.07
HMGB1P35-201ENST00000503360 FCRLAQ7L513 359 aa2.12□□□□□ -2.07
HMGB1P35-201ENST00000503360 NOTCH2NLQ7Z3S9 236 aa2.12□□□□□ -2.07
HMGB1P35-201ENST00000503360 GPR141Q7Z602 305 aa2.12□□□□□ -2.07
HMGB1P35-201ENST00000503360 TCEANCQ8N8B7 351 aa2.12□□□□□ -2.07
HMGB1P35-201ENST00000503360 GMCL1P1Q8NEA9 526 aa2.12□□□□□ -2.07
HMGB1P35-201ENST00000503360 KIAA1524Q8TCG1 905 aa2.12□□□□□ -2.07
HMGB1P35-201ENST00000503360 SMAP2Q8WU79 429 aaPredicted RBP2.12□□□□□ -2.07
HMGB1P35-201ENST00000503360 CKAP2Q8WWK9 683 aa2.12□□□□□ -2.07
HMGB1P35-201ENST00000503360 CTNNBL1Q8WYA6 563 aaPredicted RBP2.12□□□□□ -2.07
HMGB1P35-201ENST00000503360 SHC3Q92529 594 aa2.12□□□□□ -2.07
HMGB1P35-201ENST00000503360 PRCCQ92733 491 aaPredicted RBP2.12□□□□□ -2.07
HMGB1P35-201ENST00000503360 NXPE2Q96DL1 559 aa2.12□□□□□ -2.07
HMGB1P35-201ENST00000503360 ZNF486Q96H40 463 aaPredicted RBP2.12□□□□□ -2.07
HMGB1P35-201ENST00000503360 TSSK2Q96PF2 358 aa2.12□□□□□ -2.07
HMGB1P35-201ENST00000503360 TXN2Q99757 166 aa2.12□□□□□ -2.07
HMGB1P35-201ENST00000503360 PYGO2Q9BRQ0 406 aa2.12□□□□□ -2.07
HMGB1P35-201ENST00000503360 ATG101Q9BSB4 218 aa2.12□□□□□ -2.07
HMGB1P35-201ENST00000503360 CRACR2AQ9BSW2 395 aa2.12□□□□□ -2.07
HMGB1P35-201ENST00000503360 RBM4Q9BWF3 364 aaKnown RBP2.12□□□□□ -2.07
HMGB1P35-201ENST00000503360 ZNF350Q9GZX5 532 aa2.12□□□□□ -2.07
HMGB1P35-201ENST00000503360 DPH5Q9H2P9 285 aa2.12□□□□□ -2.07
HMGB1P35-201ENST00000503360 UBQLN3Q9H347 655 aa2.12□□□□□ -2.07
HMGB1P35-201ENST00000503360 RPF1Q9H9Y2 349 aaKnown RBP2.12□□□□□ -2.07
HMGB1P35-201ENST00000503360 FGF22Q9HCT0 170 aa2.12□□□□□ -2.07
HMGB1P35-201ENST00000503360 STAU2Q9NUL3 570 aaKnown RBP eCLIP2.12□□□□□ -2.07
HMGB1P35-201ENST00000503360 TBC1D13Q9NVG8 400 aa2.12□□□□□ -2.07
HMGB1P35-201ENST00000503360 ATAD3AQ9NVI7 634 aa2.12□□□□□ -2.07
HMGB1P35-201ENST00000503360 TMEM161AQ9NX61 479 aa2.12□□□□□ -2.07
HMGB1P35-201ENST00000503360 AATFQ9NY61 560 aaKnown RBP eCLIP2.12□□□□□ -2.07
HMGB1P35-201ENST00000503360 SLCO1C1Q9NYB5 712 aa2.12□□□□□ -2.07
HMGB1P35-201ENST00000503360 CYP39A1Q9NYL5 469 aa2.12□□□□□ -2.07
HMGB1P35-201ENST00000503360 HACD3Q9P035 362 aa2.12□□□□□ -2.07
HMGB1P35-201ENST00000503360 HMG20BQ9P0W2 317 aa2.12□□□□□ -2.07
HMGB1P35-201ENST00000503360 FETUBQ9UGM5 382 aa2.12□□□□□ -2.07
HMGB1P35-201ENST00000503360 FBXL5Q9UKA1 691 aa2.12□□□□□ -2.07
HMGB1P35-201ENST00000503360 FBXW2Q9UKT8 454 aa2.12□□□□□ -2.07
HMGB1P35-201ENST00000503360 HPCAL4Q9UM19 191 aa2.12□□□□□ -2.07
HMGB1P35-201ENST00000503360 STX8Q9UNK0 236 aa2.12□□□□□ -2.07
HMGB1P35-201ENST00000503360 GPR132Q9UNW8 380 aa2.12□□□□□ -2.07
HMGB1P35-201ENST00000503360 EXOC7Q9UPT5 735 aa2.12□□□□□ -2.07
HMGB1P35-201ENST00000503360 RPH3AQ9Y2J0 694 aaPredicted RBP2.12□□□□□ -2.07
HMGB1P35-201ENST00000503360 PCDHGA1Q9Y5H4 931 aa2.12□□□□□ -2.07
HMGB1P35-201ENST00000503360 COLEC10Q9Y6Z7 277 aa2.12□□□□□ -2.07
HMGB1P35-201ENST00000503360 ATP8B3O60423 1300 aa2.12□□□□□ -2.07
HMGB1P35-201ENST00000503360 ACEP12821 1306 aa2.12□□□□□ -2.07
HMGB1P35-201ENST00000503360 ATRXP46100 2492 aa2.11□□□□□ -2.07
HMGB1P35-201ENST00000503360 MYH14Q7Z406 1995 aaKnown RBP2.11□□□□□ -2.07
HMGB1P35-201ENST00000503360 A0A087X002 238 aa2.11□□□□□ -2.07
HMGB1P35-201ENST00000503360 TRBV2A0A0J9YWF9 115 aa2.11□□□□□ -2.07
HMGB1P35-201ENST00000503360 C13orf42A0A1B0GVH6 325 aa2.11□□□□□ -2.07
HMGB1P35-201ENST00000503360 A0A1W2PNU3 283 aaPredicted RBP2.11□□□□□ -2.07
HMGB1P35-201ENST00000503360 A0A1W2PR80 420 aa2.11□□□□□ -2.07
HMGB1P35-201ENST00000503360 A8MVM7 634 aa2.11□□□□□ -2.07
HMGB1P35-201ENST00000503360 NR5A2O00482 541 aa2.11□□□□□ -2.07
HMGB1P35-201ENST00000503360 RASGRF2O14827 1237 aa2.11□□□□□ -2.07
HMGB1P35-201ENST00000503360 KIF5CO60282 957 aa2.11□□□□□ -2.07
HMGB1P35-201ENST00000503360 ACSL4O60488 711 aa2.11□□□□□ -2.07
HMGB1P35-201ENST00000503360 ZG16O60844 167 aa2.11□□□□□ -2.07
HMGB1P35-201ENST00000503360 TSC22D2O75157 780 aa2.11□□□□□ -2.07
HMGB1P35-201ENST00000503360 RAD51DO75771 328 aa2.11□□□□□ -2.07
HMGB1P35-201ENST00000503360 KRT33AO76009 404 aa2.11□□□□□ -2.07
HMGB1P35-201ENST00000503360 LETM1O95202 739 aaPredicted RBP2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms