RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 TRPS1Q9UHF7 1281 aa10.98□□□□□ -0.65
CTSA-209ENST00000493522 FARSAQ9Y285 508 aaKnown RBP10.98□□□□□ -0.65
CTSA-209ENST00000493522 PTRH2Q9Y3E5 179 aaKnown RBP10.98□□□□□ -0.65
CTSA-209ENST00000493522 NAALAD2Q9Y3Q0 740 aa10.98□□□□□ -0.65
CTSA-209ENST00000493522 PCDHGA6Q9Y5G7 932 aa10.98□□□□□ -0.65
CTSA-209ENST00000493522 PCDHGA11Q9Y5H2 935 aa10.98□□□□□ -0.65
CTSA-209ENST00000493522 SLC22A7Q9Y694 548 aa10.98□□□□□ -0.65
CTSA-209ENST00000493522 USP9XQ93008 2570 aaPredicted RBP10.98□□□□□ -0.65
CTSA-209ENST00000493522 NOTCH2Q04721 2471 aa10.97□□□□□ -0.65
CTSA-209ENST00000493522 A0A1B0GTL3 188 aa10.97□□□□□ -0.65
CTSA-209ENST00000493522 CDC14CA4D256 554 aa10.97□□□□□ -0.65
CTSA-209ENST00000493522 C4orf51C9J302 202 aa10.97□□□□□ -0.65
CTSA-209ENST00000493522 H0YIG0 161 aa10.97□□□□□ -0.65
CTSA-209ENST00000493522 H0YIV9 168 aa10.97□□□□□ -0.65
CTSA-209ENST00000493522 PPP6CO00743 305 aa10.97□□□□□ -0.65
CTSA-209ENST00000493522 CNOT3O75175 753 aaKnown RBP10.97□□□□□ -0.65
CTSA-209ENST00000493522 CREG1O75629 220 aa10.97□□□□□ -0.65
CTSA-209ENST00000493522 MLYCDO95822 493 aa10.97□□□□□ -0.65
CTSA-209ENST00000493522 B3GALT4O96024 378 aa10.97□□□□□ -0.65
CTSA-209ENST00000493522 HMOX2P30519 316 aa10.97□□□□□ -0.65
CTSA-209ENST00000493522 ALDH3A1P30838 453 aa10.97□□□□□ -0.65
CTSA-209ENST00000493522 HNRNPH1P31943 449 aaKnown RBP10.97□□□□□ -0.65
CTSA-209ENST00000493522 NAGLUP54802 743 aa10.97□□□□□ -0.65
CTSA-209ENST00000493522 FOXL2P58012 376 aa10.97□□□□□ -0.65
CTSA-209ENST00000493522 DNAJB13P59910 316 aa10.97□□□□□ -0.65
CTSA-209ENST00000493522 NAA20P61599 178 aa10.97□□□□□ -0.65
CTSA-209ENST00000493522 OLR1P78380 273 aa10.97□□□□□ -0.65
CTSA-209ENST00000493522 OCA2Q04671 838 aa10.97□□□□□ -0.65
CTSA-209ENST00000493522 TGM3Q08188 693 aa10.97□□□□□ -0.65
CTSA-209ENST00000493522 IFT88Q13099 833 aa10.97□□□□□ -0.65
CTSA-209ENST00000493522 SYT16Q17RD7 645 aa10.97□□□□□ -0.65
CTSA-209ENST00000493522 LETMD1Q6P1Q0 360 aa10.97□□□□□ -0.65
CTSA-209ENST00000493522 SHISA6Q6ZSJ9 500 aa10.97□□□□□ -0.65
CTSA-209ENST00000493522 FRMD7Q6ZUT3 714 aa10.97□□□□□ -0.65
CTSA-209ENST00000493522 OVCH1Q7RTY7 1134 aa10.97□□□□□ -0.65
CTSA-209ENST00000493522 SYVN1Q86TM6 617 aa10.97□□□□□ -0.65
CTSA-209ENST00000493522 PDSS2Q86YH6 399 aa10.97□□□□□ -0.65
CTSA-209ENST00000493522 LURAP1LQ8IV03 231 aa10.97□□□□□ -0.65
CTSA-209ENST00000493522 PRSS58Q8IYP2 241 aa10.97□□□□□ -0.65
CTSA-209ENST00000493522 RNF175Q8N4F7 328 aa10.97□□□□□ -0.65
CTSA-209ENST00000493522 GOLGA6L1Q8N7Z2 621 aa10.97□□□□□ -0.65
CTSA-209ENST00000493522 CDYL2Q8N8U2 506 aa10.97□□□□□ -0.65
CTSA-209ENST00000493522 AMER3Q8N944 861 aa10.97□□□□□ -0.65
CTSA-209ENST00000493522 HUS1BQ8NHY5 278 aa10.97□□□□□ -0.65
CTSA-209ENST00000493522 FAR2Q96K12 515 aa10.97□□□□□ -0.65
CTSA-209ENST00000493522 PKNOX2Q96KN3 472 aa10.97□□□□□ -0.65
CTSA-209ENST00000493522 MTERF1Q99551 399 aaKnown RBP10.97□□□□□ -0.65
CTSA-209ENST00000493522 RBCK1Q9BYM8 510 aa10.97□□□□□ -0.65
CTSA-209ENST00000493522 REXO4Q9GZR2 422 aaKnown RBP10.97□□□□□ -0.65
CTSA-209ENST00000493522 AICDAQ9GZX7 198 aa10.97□□□□□ -0.65
CTSA-209ENST00000493522 ELOVL6Q9H5J4 265 aa10.97□□□□□ -0.65
CTSA-209ENST00000493522 SOX17Q9H6I2 414 aaPredicted RBP10.97□□□□□ -0.65
CTSA-209ENST00000493522 COPS7BQ9H9Q2 264 aaPredicted RBP10.97□□□□□ -0.65
CTSA-209ENST00000493522 MID1IP1Q9NPA3 183 aa10.97□□□□□ -0.65
CTSA-209ENST00000493522 ZNF282Q9UDV7 671 aaPredicted RBP10.97□□□□□ -0.65
CTSA-209ENST00000493522 ADGRE2Q9UHX3 823 aa10.97□□□□□ -0.65
CTSA-209ENST00000493522 TCFL5Q9UL49 500 aa10.97□□□□□ -0.65
CTSA-209ENST00000493522 MAN2B2Q9Y2E5 1009 aa10.97□□□□□ -0.65
CTSA-209ENST00000493522 ACTL7BQ9Y614 415 aa10.97□□□□□ -0.65
CTSA-209ENST00000493522 PCSK5Q92824 1860 aa10.96□□□□□ -0.65
CTSA-209ENST00000493522 A0A088AWK7 358 aa10.96□□□□□ -0.65
CTSA-209ENST00000493522 LRIT2A6NDA9 550 aa10.96□□□□□ -0.65
CTSA-209ENST00000493522 MKRN2OSH3BPM6 223 aa10.96□□□□□ -0.65
CTSA-209ENST00000493522 TM9SF1O15321 606 aa10.96□□□□□ -0.65
CTSA-209ENST00000493522 GALR3O60755 368 aaPredicted RBP10.96□□□□□ -0.65
CTSA-209ENST00000493522 TRIM13O60858 407 aa10.96□□□□□ -0.65
CTSA-209ENST00000493522 CRCPO75575 148 aa10.96□□□□□ -0.65
CTSA-209ENST00000493522 ZWINTO95229 277 aa10.96□□□□□ -0.65
CTSA-209ENST00000493522 ONECUT2O95948 504 aa10.96□□□□□ -0.65
CTSA-209ENST00000493522 TGFB1P01137 390 aa10.96□□□□□ -0.65
CTSA-209ENST00000493522 ALBP02768 609 aa10.96□□□□□ -0.65
CTSA-209ENST00000493522 CD63P08962 238 aa10.96□□□□□ -0.65
CTSA-209ENST00000493522 ZNF10P21506 573 aaPredicted RBP10.96□□□□□ -0.65
CTSA-209ENST00000493522 OTX2P32243 289 aa10.96□□□□□ -0.65
CTSA-209ENST00000493522 PIK3CBP42338 1070 aa10.96□□□□□ -0.65
CTSA-209ENST00000493522 SERPINB4P48594 390 aa10.96□□□□□ -0.65
CTSA-209ENST00000493522 RAP1GDS1P52306 607 aa10.96□□□□□ -0.65
CTSA-209ENST00000493522 PLA2G16P53816 162 aa10.96□□□□□ -0.65
CTSA-209ENST00000493522 PKNOX1P55347 436 aa10.96□□□□□ -0.65
CTSA-209ENST00000493522 MAGOHP61326 146 aaKnown RBP10.96□□□□□ -0.65
CTSA-209ENST00000493522 RPS13P62277 151 aaKnown RBP10.96□□□□□ -0.65
CTSA-209ENST00000493522 IL10RAQ13651 578 aa10.96□□□□□ -0.65
CTSA-209ENST00000493522 ERV3-1Q14264 604 aa10.96□□□□□ -0.65
CTSA-209ENST00000493522 NKG7Q16617 165 aa10.96□□□□□ -0.65
CTSA-209ENST00000493522 SGO1Q5FBB7 561 aa10.96□□□□□ -0.65
CTSA-209ENST00000493522 ATP1A1-AS1Q5TC04 95 aa10.96□□□□□ -0.65
CTSA-209ENST00000493522 MFSD4BQ5TF39 518 aa10.96□□□□□ -0.65
CTSA-209ENST00000493522 AGBL2Q5U5Z8 902 aa10.96□□□□□ -0.65
CTSA-209ENST00000493522 FAM219BQ5XKK7 198 aa10.96□□□□□ -0.65
CTSA-209ENST00000493522 FRG2Q64ET8 278 aa10.96□□□□□ -0.65
CTSA-209ENST00000493522 NIPAL1Q6NVV3 410 aa10.96□□□□□ -0.65
CTSA-209ENST00000493522 MRPL14Q6P1L8 145 aaKnown RBP10.96□□□□□ -0.65
CTSA-209ENST00000493522 RAB43Q86YS6 212 aa10.96□□□□□ -0.65
CTSA-209ENST00000493522 ZC3H7AQ8IWR0 971 aaKnown RBP10.96□□□□□ -0.65
CTSA-209ENST00000493522 AFAP1L2Q8N4X5 818 aa10.96□□□□□ -0.65
CTSA-209ENST00000493522 ANKRD42Q8N9B4 389 aa10.96□□□□□ -0.65
CTSA-209ENST00000493522 TEX19Q8NA77 164 aa10.96□□□□□ -0.65
CTSA-209ENST00000493522 OR2L5Q8NG80 312 aa10.96□□□□□ -0.65
CTSA-209ENST00000493522 OR5T3Q8NGG3 340 aa10.96□□□□□ -0.65
CTSA-209ENST00000493522 OR2Y1Q8NGV0 311 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms