RNA–Protein interactions for RNA: ENST00000491867.5

ATG4B-222, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 435 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-222ENST00000491867 HYAL2Q12891 473 aa12.85□□□□□ -0.35
ATG4B-222ENST00000491867 SNX1Q13596 522 aa12.85□□□□□ -0.35
ATG4B-222ENST00000491867 HSPB2Q16082 182 aa12.85□□□□□ -0.35
ATG4B-222ENST00000491867 CTSL3PQ5NE16 218 aa12.85□□□□□ -0.35
ATG4B-222ENST00000491867 NDUFAF5Q5TEU4 345 aa12.85□□□□□ -0.35
ATG4B-222ENST00000491867 CAPN12Q6ZSI9 719 aa12.85□□□□□ -0.35
ATG4B-222ENST00000491867 KIAA0408Q6ZU52 694 aa12.85□□□□□ -0.35
ATG4B-222ENST00000491867 FAM109AQ8N4B1 249 aa12.85□□□□□ -0.35
ATG4B-222ENST00000491867 CAMKVQ8NCB2 501 aa12.85□□□□□ -0.35
ATG4B-222ENST00000491867 APCDD1LQ8NCL9 501 aa12.85□□□□□ -0.35
ATG4B-222ENST00000491867 ZNF480Q8WV37 535 aa12.85□□□□□ -0.35
ATG4B-222ENST00000491867 SARAFQ96BY9 339 aa12.85□□□□□ -0.35
ATG4B-222ENST00000491867 FAM136AQ96C01 138 aa12.85□□□□□ -0.35
ATG4B-222ENST00000491867 IL22Q9GZX6 179 aa12.85□□□□□ -0.35
ATG4B-222ENST00000491867 EIF2B3Q9NR50 452 aaKnown RBP12.85□□□□□ -0.35
ATG4B-222ENST00000491867 FAM114A2Q9NRY5 505 aa12.85□□□□□ -0.35
ATG4B-222ENST00000491867 MTRF1LQ9UGC7 380 aaKnown RBP12.85□□□□□ -0.35
ATG4B-222ENST00000491867 FOXD3Q9UJU5 478 aaPredicted RBP12.85□□□□□ -0.35
ATG4B-222ENST00000491867 EML6Q6ZMW3 1958 aa12.85□□□□□ -0.35
ATG4B-222ENST00000491867 ATP6AP2A0A1C7CYW4 349 aa12.84□□□□□ -0.35
ATG4B-222ENST00000491867 A8MVJ9 347 aa12.84□□□□□ -0.35
ATG4B-222ENST00000491867 CHST10O43529 356 aa12.84□□□□□ -0.35
ATG4B-222ENST00000491867 SUSD5O60279 629 aa12.84□□□□□ -0.35
ATG4B-222ENST00000491867 PSIP1O75475 530 aaKnown RBP12.84□□□□□ -0.35
ATG4B-222ENST00000491867 NDUFS3O75489 264 aa12.84□□□□□ -0.35
ATG4B-222ENST00000491867 ATP6AP2O75787 350 aa12.84□□□□□ -0.35
ATG4B-222ENST00000491867 HRGP04196 525 aa12.84□□□□□ -0.35
ATG4B-222ENST00000491867 GABRA1P14867 456 aa12.84□□□□□ -0.35
ATG4B-222ENST00000491867 MAOAP21397 527 aa12.84□□□□□ -0.35
ATG4B-222ENST00000491867 JAK1P23458 1154 aa12.84□□□□□ -0.35
ATG4B-222ENST00000491867 COILP38432 576 aaPredicted RBP12.84□□□□□ -0.35
ATG4B-222ENST00000491867 CLCN2P51788 898 aa12.84□□□□□ -0.35
ATG4B-222ENST00000491867 EIF3BP55884 814 aaKnown RBP12.84□□□□□ -0.35
ATG4B-222ENST00000491867 OLR1P78380 273 aa12.84□□□□□ -0.35
ATG4B-222ENST00000491867 MEF2AQ02078 507 aaPredicted RBP12.84□□□□□ -0.35
ATG4B-222ENST00000491867 GBX1Q14549 363 aa12.84□□□□□ -0.35
ATG4B-222ENST00000491867 GK5Q6ZS86 529 aa12.84□□□□□ -0.35
ATG4B-222ENST00000491867 SEM1Q6ZVN7 128 aa12.84□□□□□ -0.35
ATG4B-222ENST00000491867 YTHDF3Q7Z739 585 aaKnown RBP12.84□□□□□ -0.35
ATG4B-222ENST00000491867 SLC26A11Q86WA9 606 aa12.84□□□□□ -0.35
ATG4B-222ENST00000491867 KIF18BQ86Y91 864 aa12.84□□□□□ -0.35
ATG4B-222ENST00000491867 LRRC75A-AS1Q8N1F1 130 aa12.84□□□□□ -0.35
ATG4B-222ENST00000491867 RNF10Q8N5U6 811 aaKnown RBP12.84□□□□□ -0.35
ATG4B-222ENST00000491867 NAXEQ8NCW5 288 aa12.84□□□□□ -0.35
ATG4B-222ENST00000491867 SLC13A3Q8WWT9 602 aa12.84□□□□□ -0.35
ATG4B-222ENST00000491867 TM4SF19Q96DZ7 209 aa12.84□□□□□ -0.35
ATG4B-222ENST00000491867 THAP11Q96EK4 314 aa12.84□□□□□ -0.35
ATG4B-222ENST00000491867 BIRC8Q96P09 236 aa12.84□□□□□ -0.35
ATG4B-222ENST00000491867 LDAHQ9H6V9 325 aa12.84□□□□□ -0.35
ATG4B-222ENST00000491867 EXO5Q9H790 373 aa12.84□□□□□ -0.35
ATG4B-222ENST00000491867 TMEM184CQ9NVA4 438 aa12.84□□□□□ -0.35
ATG4B-222ENST00000491867 HPF1Q9NWY4 346 aa12.84□□□□□ -0.35
ATG4B-222ENST00000491867 TRMT1Q9NXH9 659 aaKnown RBP12.84□□□□□ -0.35
ATG4B-222ENST00000491867 YARS2Q9Y2Z4 477 aaKnown RBP12.84□□□□□ -0.35
ATG4B-222ENST00000491867 SLC22A7Q9Y694 548 aa12.84□□□□□ -0.35
ATG4B-222ENST00000491867 GOSR1O95249 250 aa12.83□□□□□ -0.36
ATG4B-222ENST00000491867 CATP04040 527 aaKnown RBP12.83□□□□□ -0.36
ATG4B-222ENST00000491867 ZSCAN5DPP0CG00 497 aa12.83□□□□□ -0.36
ATG4B-222ENST00000491867 ARNTP27540 789 aa12.83□□□□□ -0.36
ATG4B-222ENST00000491867 NMBRP28336 390 aa12.83□□□□□ -0.36
ATG4B-222ENST00000491867 ATP5DP30049 168 aa12.83□□□□□ -0.36
ATG4B-222ENST00000491867 RPL22P35268 128 aaKnown RBP12.83□□□□□ -0.36
ATG4B-222ENST00000491867 SLC10A1Q14973 349 aa12.83□□□□□ -0.36
ATG4B-222ENST00000491867 CATSPEREQ5SY80 951 aa12.83□□□□□ -0.36
ATG4B-222ENST00000491867 PRSS57Q6UWY2 283 aa12.83□□□□□ -0.36
ATG4B-222ENST00000491867 IL20RBQ6UXL0 311 aa12.83□□□□□ -0.36
ATG4B-222ENST00000491867 ASPGQ86U10 573 aa12.83□□□□□ -0.36
ATG4B-222ENST00000491867 OTUD6BQ8N6M0 293 aa12.83□□□□□ -0.36
ATG4B-222ENST00000491867 ASB15Q8WXK1 588 aa12.83□□□□□ -0.36
ATG4B-222ENST00000491867 LPGAT1Q92604 370 aa12.83□□□□□ -0.36
ATG4B-222ENST00000491867 KIAA1191Q96A73 305 aa12.83□□□□□ -0.36
ATG4B-222ENST00000491867 CAPZA3Q96KX2 299 aa12.83□□□□□ -0.36
ATG4B-222ENST00000491867 LIN28AQ9H9Z2 209 aaKnown RBP12.83□□□□□ -0.36
ATG4B-222ENST00000491867 SPRR3Q9UBC9 169 aa12.83□□□□□ -0.36
ATG4B-222ENST00000491867 CUBNO60494 3623 aa12.83□□□□□ -0.36
ATG4B-222ENST00000491867 IGKV3D-11A0A0A0MRZ8 115 aa12.82□□□□□ -0.36
ATG4B-222ENST00000491867 TRGV5A0A0B4J1U4 118 aa12.82□□□□□ -0.36
ATG4B-222ENST00000491867 TCRBV16S1A1N1A0A5B0 115 aa12.82□□□□□ -0.36
ATG4B-222ENST00000491867 AP3B1O00203 1094 aa12.82□□□□□ -0.36
ATG4B-222ENST00000491867 LCMT2O60294 686 aaKnown RBP12.82□□□□□ -0.36
ATG4B-222ENST00000491867 NIPSNAP2O75323 286 aa12.82□□□□□ -0.36
ATG4B-222ENST00000491867 OR2J2O76002 312 aa12.82□□□□□ -0.36
ATG4B-222ENST00000491867 OR6B1O95007 311 aa12.82□□□□□ -0.36
ATG4B-222ENST00000491867 VAPBO95292 243 aa12.82□□□□□ -0.36
ATG4B-222ENST00000491867 SYF2O95926 243 aaKnown RBP12.82□□□□□ -0.36
ATG4B-222ENST00000491867 B3GALT4O96024 378 aa12.82□□□□□ -0.36
ATG4B-222ENST00000491867 BMP7P18075 431 aa12.82□□□□□ -0.36
ATG4B-222ENST00000491867 ENDOUP21128 410 aaKnown RBP12.82□□□□□ -0.36
ATG4B-222ENST00000491867 HRH2P25021 359 aa12.82□□□□□ -0.36
ATG4B-222ENST00000491867 WNT3P56703 355 aa12.82□□□□□ -0.36
ATG4B-222ENST00000491867 BASP1P80723 227 aaKnown RBP12.82□□□□□ -0.36
ATG4B-222ENST00000491867 HERC3Q15034 1050 aa12.82□□□□□ -0.36
ATG4B-222ENST00000491867 SIX1Q15475 284 aaPredicted RBP12.82□□□□□ -0.36
ATG4B-222ENST00000491867 KLHL38Q2WGJ6 581 aa12.82□□□□□ -0.36
ATG4B-222ENST00000491867 DEFB134Q4QY38 66 aa12.82□□□□□ -0.36
ATG4B-222ENST00000491867 ACSBG2Q5FVE4 666 aa12.82□□□□□ -0.36
ATG4B-222ENST00000491867 XKR6Q5GH73 641 aa12.82□□□□□ -0.36
ATG4B-222ENST00000491867 RNF187Q5TA31 235 aaPredicted RBP12.82□□□□□ -0.36
ATG4B-222ENST00000491867 CAPN13Q6MZZ7 669 aaPredicted RBP12.82□□□□□ -0.36
ATG4B-222ENST00000491867 HMBOX1Q6NT76 420 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms