RNA–Protein interactions for RNA: ENST00000487519.5

TFAM-204, Transcript of transcription factor A, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TFAM, Length 5,414 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFAM-204ENST00000487519 ZDHHC14Q8IZN3 488 aa13.46□□□□□ -0.25
TFAM-204ENST00000487519 WDTC1Q8N5D0 677 aa13.46□□□□□ -0.25
TFAM-204ENST00000487519 TRAM1L1Q8N609 369 aa13.46□□□□□ -0.25
TFAM-204ENST00000487519 KRTCAP2Q8N6L1 136 aa13.46□□□□□ -0.25
TFAM-204ENST00000487519 TCEANCQ8N8B7 351 aa13.46□□□□□ -0.25
TFAM-204ENST00000487519 RBP7Q96R05 134 aa13.46□□□□□ -0.25
TFAM-204ENST00000487519 C11orf98E9PRG8 122 aa13.46□□□□□ -0.25
TFAM-204ENST00000487519 SMAD9O15198 467 aaKnown RBP13.46□□□□□ -0.25
TFAM-204ENST00000487519 SCO2O43819 266 aa13.46□□□□□ -0.25
TFAM-204ENST00000487519 C8BP07358 591 aa13.46□□□□□ -0.25
TFAM-204ENST00000487519 IL3P08700 152 aa13.46□□□□□ -0.25
TFAM-204ENST00000487519 SLC10A3P09131 477 aa13.46□□□□□ -0.25
TFAM-204ENST00000487519 CAPZA1P52907 286 aa13.46□□□□□ -0.25
TFAM-204ENST00000487519 RPS3AP61247 264 aaKnown RBP13.46□□□□□ -0.25
TFAM-204ENST00000487519 POU6F2P78424 691 aaPredicted RBP13.46□□□□□ -0.25
TFAM-204ENST00000487519 KCNC3Q14003 757 aa13.46□□□□□ -0.25
TFAM-204ENST00000487519 PRAMEF17Q5VTA0 474 aa13.46□□□□□ -0.25
TFAM-204ENST00000487519 SNX29P2Q8IUI4 249 aa13.46□□□□□ -0.25
TFAM-204ENST00000487519 TMEM130Q8N3G9 435 aa13.46□□□□□ -0.25
TFAM-204ENST00000487519 TOR3AQ9H497 397 aa13.46□□□□□ -0.25
TFAM-204ENST00000487519 IL23AQ9NPF7 189 aa13.46□□□□□ -0.25
TFAM-204ENST00000487519 PRDM4Q9UKN5 801 aa13.46□□□□□ -0.25
TFAM-204ENST00000487519 MAU2Q9Y6X3 613 aa13.46□□□□□ -0.25
TFAM-204ENST00000487519 RLN2P04090 185 aa13.46□□□□□ -0.25
TFAM-204ENST00000487519 S100A6P06703 90 aa13.46□□□□□ -0.25
TFAM-204ENST00000487519 HNRNPA1P09651 372 aaKnown RBP eCLIP13.46□□□□□ -0.25
TFAM-204ENST00000487519 C1GALT1C1LP0DN25 315 aa13.46□□□□□ -0.25
TFAM-204ENST00000487519 OR12D1P0DN82 309 aa13.46□□□□□ -0.25
TFAM-204ENST00000487519 JUNDP17535 347 aa13.46□□□□□ -0.25
TFAM-204ENST00000487519 SLC9A3P48764 834 aa13.46□□□□□ -0.25
TFAM-204ENST00000487519 SLC10A2Q12908 348 aaPredicted RBP13.46□□□□□ -0.25
TFAM-204ENST00000487519 NRROSQ86YC3 692 aa13.46□□□□□ -0.25
TFAM-204ENST00000487519 FOXRED2Q8IWF2 684 aa13.46□□□□□ -0.25
TFAM-204ENST00000487519 LINC00471Q8N535 108 aa13.46□□□□□ -0.25
TFAM-204ENST00000487519 IL22RA1Q8N6P7 574 aa13.46□□□□□ -0.25
TFAM-204ENST00000487519 TMEM40Q8WWA1 233 aa13.46□□□□□ -0.25
TFAM-204ENST00000487519 CMKLR1Q99788 373 aa13.46□□□□□ -0.25
TFAM-204ENST00000487519 VRTNQ9H8Y1 702 aa13.46□□□□□ -0.25
TFAM-204ENST00000487519 GPR34Q9UPC5 381 aa13.46□□□□□ -0.25
TFAM-204ENST00000487519 ABCC6O95255 1503 aa13.46□□□□□ -0.26
TFAM-204ENST00000487519 CICQ96RK0 1608 aaPredicted RBP13.46□□□□□ -0.26
TFAM-204ENST00000487519 NR2C1P13056 603 aa13.46□□□□□ -0.26
TFAM-204ENST00000487519 ACRV1P26436 265 aa13.46□□□□□ -0.26
TFAM-204ENST00000487519 GABRA3P34903 492 aa13.46□□□□□ -0.26
TFAM-204ENST00000487519 RHDQ02161 417 aa13.46□□□□□ -0.26
TFAM-204ENST00000487519 MEP1AQ16819 746 aa13.46□□□□□ -0.26
TFAM-204ENST00000487519 ZNF783Q6ZMS7 281 aa13.46□□□□□ -0.26
TFAM-204ENST00000487519 ASPGQ86U10 573 aa13.46□□□□□ -0.26
TFAM-204ENST00000487519 TSACCQ96A04 125 aaPredicted RBP13.46□□□□□ -0.26
TFAM-204ENST00000487519 PNPLA2Q96AD5 504 aa13.46□□□□□ -0.26
TFAM-204ENST00000487519 RAB7BQ96AH8 199 aa13.46□□□□□ -0.26
TFAM-204ENST00000487519 C14orf105Q9NVL8 296 aa13.46□□□□□ -0.26
TFAM-204ENST00000487519 VSTM5A8MXK1 200 aa13.46□□□□□ -0.26
TFAM-204ENST00000487519 OAZ2O95190 189 aa13.46□□□□□ -0.26
TFAM-204ENST00000487519 RAB36O95755 333 aa13.46□□□□□ -0.26
TFAM-204ENST00000487519 PDYNP01213 254 aa13.46□□□□□ -0.26
TFAM-204ENST00000487519 PRKCDQ05655 676 aa13.46□□□□□ -0.26
TFAM-204ENST00000487519 THOC7Q6I9Y2 204 aaKnown RBP13.46□□□□□ -0.26
TFAM-204ENST00000487519 ZNF782Q6ZMW2 699 aaPredicted RBP13.46□□□□□ -0.26
TFAM-204ENST00000487519 APCDD1Q8J025 514 aa13.46□□□□□ -0.26
TFAM-204ENST00000487519 PXYLP1Q8TE99 480 aa13.46□□□□□ -0.26
TFAM-204ENST00000487519 ZNF317Q96PQ6 595 aaPredicted RBP13.46□□□□□ -0.26
TFAM-204ENST00000487519 ZNF382Q96SR6 550 aa13.46□□□□□ -0.26
TFAM-204ENST00000487519 DPH7Q9BTV6 452 aa13.46□□□□□ -0.26
TFAM-204ENST00000487519 PTTG2Q9NZH5 202 aa13.46□□□□□ -0.26
TFAM-204ENST00000487519 MARCH4Q9P2E8 410 aaPredicted RBP13.46□□□□□ -0.26
TFAM-204ENST00000487519 EIF3KQ9UBQ5 218 aaKnown RBP13.46□□□□□ -0.26
TFAM-204ENST00000487519 SH3D21A4FU49 640 aa13.45□□□□□ -0.26
TFAM-204ENST00000487519 DNAJB1P25685 340 aa13.45□□□□□ -0.26
TFAM-204ENST00000487519 SLC6A6P31641 620 aa13.45□□□□□ -0.26
TFAM-204ENST00000487519 SPIN3Q5JUX0 258 aa13.45□□□□□ -0.26
TFAM-204ENST00000487519 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.45□□□□□ -0.265e-12■■■■□ 25.4
TFAM-204ENST00000487519 TMEM17Q86X19 198 aa13.45□□□□□ -0.26
TFAM-204ENST00000487519 SLITRK4Q8IW52 837 aa13.45□□□□□ -0.26
TFAM-204ENST00000487519 OR8K3Q8NH51 312 aa13.45□□□□□ -0.26
TFAM-204ENST00000487519 CEP76Q8TAP6 659 aa13.45□□□□□ -0.26
TFAM-204ENST00000487519 FBXL20Q96IG2 436 aa13.45□□□□□ -0.26
TFAM-204ENST00000487519 NPLQ9BXD5 320 aaPredicted RBP13.45□□□□□ -0.26
TFAM-204ENST00000487519 TPSD1Q9BZJ3 242 aa13.45□□□□□ -0.26
TFAM-204ENST00000487519 OR51I1Q9H343 314 aa13.45□□□□□ -0.26
TFAM-204ENST00000487519 MEAF6Q9HAF1 191 aa13.45□□□□□ -0.26
TFAM-204ENST00000487519 RICTORQ6R327 1708 aa13.45□□□□□ -0.26
TFAM-204ENST00000487519 MAFKO60675 156 aa13.45□□□□□ -0.26
TFAM-204ENST00000487519 RFPL1O75677 317 aa13.45□□□□□ -0.26
TFAM-204ENST00000487519 CD1DP15813 335 aa13.45□□□□□ -0.26
TFAM-204ENST00000487519 GRIA2P42262 883 aa13.45□□□□□ -0.26
TFAM-204ENST00000487519 NTHL1P78549 312 aa13.45□□□□□ -0.26
TFAM-204ENST00000487519 CCDC80Q76M96 950 aa13.45□□□□□ -0.26
TFAM-204ENST00000487519 SLC15A3Q8IY34 581 aa13.45□□□□□ -0.26
TFAM-204ENST00000487519 MFSD2AQ8NA29 543 aa13.45□□□□□ -0.26
TFAM-204ENST00000487519 MND1Q9BWT6 205 aa13.45□□□□□ -0.26
TFAM-204ENST00000487519 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.45□□□□□ -0.26
TFAM-204ENST00000487519 ITGB1BP2Q9UKP3 347 aa13.45□□□□□ -0.26
TFAM-204ENST00000487519 SLC22A1O15245 554 aa13.45□□□□□ -0.26
TFAM-204ENST00000487519 ARL6IP5O75915 188 aa13.45□□□□□ -0.26
TFAM-204ENST00000487519 CLIC3O95833 236 aa13.45□□□□□ -0.26
TFAM-204ENST00000487519 FGF3P11487 239 aaPredicted RBP13.45□□□□□ -0.26
TFAM-204ENST00000487519 LEPRP48357 1165 aaKnown RBP13.45□□□□□ -0.26
TFAM-204ENST00000487519 TPTEP56180 551 aa13.45□□□□□ -0.26
TFAM-204ENST00000487519 BNIP3Q12983 259 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms