RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 MAGEA11P43364 429 aa4.41□□□□□ -1.7
PRPF38A-203ENST00000487160 CLDN17P56750 224 aa4.41□□□□□ -1.7
PRPF38A-203ENST00000487160 KIAA1024LP59773 190 aa4.41□□□□□ -1.7
PRPF38A-203ENST00000487160 KCNJ10P78508 379 aa4.41□□□□□ -1.7
PRPF38A-203ENST00000487160 ARHGAP1Q07960 439 aa4.41□□□□□ -1.7
PRPF38A-203ENST00000487160 TEFQ10587 303 aa4.41□□□□□ -1.7
PRPF38A-203ENST00000487160 ABRQ12979 859 aa4.41□□□□□ -1.7
PRPF38A-203ENST00000487160 LASP1Q14847 261 aaKnown RBP4.41□□□□□ -1.7
PRPF38A-203ENST00000487160 SGCBQ16585 318 aa4.41□□□□□ -1.7
PRPF38A-203ENST00000487160 C2orf76Q3KRA6 126 aa4.41□□□□□ -1.7
PRPF38A-203ENST00000487160 FUT11Q495W5 492 aa4.41□□□□□ -1.7
PRPF38A-203ENST00000487160 ZNF542PQ5EBM4 170 aa4.41□□□□□ -1.7
PRPF38A-203ENST00000487160 PM20D1Q6GTS8 502 aa4.41□□□□□ -1.7
PRPF38A-203ENST00000487160 OR4C11Q6IEV9 310 aa4.41□□□□□ -1.7
PRPF38A-203ENST00000487160 KLHL10Q6JEL2 608 aa4.41□□□□□ -1.7
PRPF38A-203ENST00000487160 PLBD1Q6P4A8 553 aa4.41□□□□□ -1.7
PRPF38A-203ENST00000487160 CCDC60Q8IWA6 550 aaPredicted RBP4.41□□□□□ -1.7
PRPF38A-203ENST00000487160 DCUN1D3Q8IWE4 304 aa4.41□□□□□ -1.7
PRPF38A-203ENST00000487160 KLHDC8AQ8IYD2 350 aa4.41□□□□□ -1.7
PRPF38A-203ENST00000487160 PRSS35Q8N3Z0 413 aa4.41□□□□□ -1.7
PRPF38A-203ENST00000487160 SLC37A3Q8NCC5 494 aa4.41□□□□□ -1.7
PRPF38A-203ENST00000487160 OR1L3Q8NH93 324 aa4.41□□□□□ -1.7
PRPF38A-203ENST00000487160 SUSD6Q92537 303 aa4.41□□□□□ -1.7
PRPF38A-203ENST00000487160 AP2M1Q96CW1 435 aa4.41□□□□□ -1.7
PRPF38A-203ENST00000487160 CDKN2AIPNLQ96HQ2 116 aa4.41□□□□□ -1.7
PRPF38A-203ENST00000487160 C10orf90Q96M02 699 aa4.41□□□□□ -1.7
PRPF38A-203ENST00000487160 C17orf62Q9BQA9 187 aa4.41□□□□□ -1.7
PRPF38A-203ENST00000487160 ACAT2Q9BWD1 397 aa4.41□□□□□ -1.7
PRPF38A-203ENST00000487160 IDI2Q9BXS1 227 aa4.41□□□□□ -1.7
PRPF38A-203ENST00000487160 OSBPL8Q9BZF1 889 aa4.41□□□□□ -1.7
PRPF38A-203ENST00000487160 SLC39A8Q9C0K1 460 aa4.41□□□□□ -1.7
PRPF38A-203ENST00000487160 DBNDD1Q9H9R9 158 aa4.41□□□□□ -1.7
PRPF38A-203ENST00000487160 SPG21Q9NZD8 308 aa4.41□□□□□ -1.7
PRPF38A-203ENST00000487160 TRPC4Q9UBN4 977 aa4.41□□□□□ -1.7
PRPF38A-203ENST00000487160 POLR3AO14802 1390 aaPredicted RBP4.4□□□□□ -1.7
PRPF38A-203ENST00000487160 KIAA1217Q5T5P2 1943 aa4.4□□□□□ -1.7
PRPF38A-203ENST00000487160 TNS2Q63HR2 1409 aa4.4□□□□□ -1.7
PRPF38A-203ENST00000487160 ANTXRLA6NF34 631 aa4.4□□□□□ -1.71
PRPF38A-203ENST00000487160 ANKDD1BA6NHY2 528 aa4.4□□□□□ -1.71
PRPF38A-203ENST00000487160 BLOC1S5-TXNDC5H3BN57 136 aa4.4□□□□□ -1.71
PRPF38A-203ENST00000487160 DDX39AO00148 427 aaKnown RBP4.4□□□□□ -1.71
PRPF38A-203ENST00000487160 PCDH7O60245 1069 aa4.4□□□□□ -1.71
PRPF38A-203ENST00000487160 KERAO60938 352 aa4.4□□□□□ -1.71
PRPF38A-203ENST00000487160 CDC123O75794 336 aaPredicted RBP4.4□□□□□ -1.71
PRPF38A-203ENST00000487160 ZNF432O94892 652 aa4.4□□□□□ -1.71
PRPF38A-203ENST00000487160 PRSS56P0CW18 603 aa4.4□□□□□ -1.71
PRPF38A-203ENST00000487160 SP3Q02447 781 aa4.4□□□□□ -1.71
PRPF38A-203ENST00000487160 CETN1Q12798 172 aa4.4□□□□□ -1.71
PRPF38A-203ENST00000487160 RPA4Q13156 261 aa4.4□□□□□ -1.71
PRPF38A-203ENST00000487160 TRIM29Q14134 588 aa4.4□□□□□ -1.71
PRPF38A-203ENST00000487160 RPS6KA1Q15418 735 aa4.4□□□□□ -1.71
PRPF38A-203ENST00000487160 AARDQ4LEZ3 155 aa4.4□□□□□ -1.71
PRPF38A-203ENST00000487160 FFAR4Q5NUL3 377 aa4.4□□□□□ -1.71
PRPF38A-203ENST00000487160 LRRC38Q5VT99 294 aa4.4□□□□□ -1.71
PRPF38A-203ENST00000487160 FAM53AQ6NSI3 398 aaPredicted RBP4.4□□□□□ -1.71
PRPF38A-203ENST00000487160 ZNF790Q6PG37 636 aa4.4□□□□□ -1.71
PRPF38A-203ENST00000487160 SIGLEC15Q6ZMC9 328 aa4.4□□□□□ -1.71
PRPF38A-203ENST00000487160 MEX3BQ6ZN04 569 aaKnown RBP4.4□□□□□ -1.71
PRPF38A-203ENST00000487160 C5orf24Q7Z6I8 188 aa4.4□□□□□ -1.71
PRPF38A-203ENST00000487160 TDHQ8IZJ6 230 aa4.4□□□□□ -1.71
PRPF38A-203ENST00000487160 SFRP1Q8N474 314 aa4.4□□□□□ -1.71
PRPF38A-203ENST00000487160 OR4C15Q8NGM1 316 aa4.4□□□□□ -1.71
PRPF38A-203ENST00000487160 ST7LQ8TDW4 575 aa4.4□□□□□ -1.71
PRPF38A-203ENST00000487160 SAP25Q8TEE9 199 aa4.4□□□□□ -1.71
PRPF38A-203ENST00000487160 APOBEC4Q8WW27 367 aaKnown RBP4.4□□□□□ -1.71
PRPF38A-203ENST00000487160 RASL10BQ96S79 203 aa4.4□□□□□ -1.71
PRPF38A-203ENST00000487160 ACPTQ9BZG2 426 aa4.4□□□□□ -1.71
PRPF38A-203ENST00000487160 EGLN3Q9H6Z9 239 aa4.4□□□□□ -1.71
PRPF38A-203ENST00000487160 AKIRIN1Q9H9L7 192 aaPredicted RBP4.4□□□□□ -1.71
PRPF38A-203ENST00000487160 RNPEPL1Q9HAU8 725 aa4.4□□□□□ -1.71
PRPF38A-203ENST00000487160 ZNF71Q9NQZ8 489 aaPredicted RBP4.4□□□□□ -1.71
PRPF38A-203ENST00000487160 MRPL17Q9NRX2 175 aaKnown RBP4.4□□□□□ -1.71
PRPF38A-203ENST00000487160 GPR173Q9NS66 373 aa4.4□□□□□ -1.71
PRPF38A-203ENST00000487160 SLC12A6Q9UHW9 1150 aa4.4□□□□□ -1.71
PRPF38A-203ENST00000487160 FBXW2Q9UKT8 454 aa4.4□□□□□ -1.71
PRPF38A-203ENST00000487160 KIAA1551Q9HCM1 1747 aa4.4□□□□□ -1.71
PRPF38A-203ENST00000487160 N4BP2Q86UW6 1770 aaPredicted RBP4.4□□□□□ -1.71
PRPF38A-203ENST00000487160 CICQ96RK0 1608 aaPredicted RBP4.39□□□□□ -1.71
PRPF38A-203ENST00000487160 BRCA1P38398 1863 aaKnown RBP4.39□□□□□ -1.71
PRPF38A-203ENST00000487160 TOGARAM1Q9Y4F4 1720 aa4.39□□□□□ -1.71
PRPF38A-203ENST00000487160 MTMR11A4FU01 709 aa4.39□□□□□ -1.71
PRPF38A-203ENST00000487160 MSGN1A6NI15 193 aa4.39□□□□□ -1.71
PRPF38A-203ENST00000487160 KRTAP29-1A8MX34 341 aaPredicted RBP4.39□□□□□ -1.71
PRPF38A-203ENST00000487160 ERVV-2B6SEH9 535 aa4.39□□□□□ -1.71
PRPF38A-203ENST00000487160 PRSS44E7EML9 344 aa4.39□□□□□ -1.71
PRPF38A-203ENST00000487160 UMODP07911 640 aa4.39□□□□□ -1.71
PRPF38A-203ENST00000487160 HLA-DPA1P20036 260 aa4.39□□□□□ -1.71
PRPF38A-203ENST00000487160 ATP6V1E1P36543 226 aa4.39□□□□□ -1.71
PRPF38A-203ENST00000487160 SERPINH1P50454 418 aaKnown RBP4.39□□□□□ -1.71
PRPF38A-203ENST00000487160 NPRL3Q12980 569 aa4.39□□□□□ -1.71
PRPF38A-203ENST00000487160 LCE1AQ5T7P2 110 aa4.39□□□□□ -1.71
PRPF38A-203ENST00000487160 PRAMEF8Q5VWM4 474 aa4.39□□□□□ -1.71
PRPF38A-203ENST00000487160 ALKBH5Q6P6C2 394 aaKnown RBP4.39□□□□□ -1.71
PRPF38A-203ENST00000487160 TOM1L2Q6ZVM7 507 aa4.39□□□□□ -1.71
PRPF38A-203ENST00000487160 SLC24A5Q71RS6 500 aa4.39□□□□□ -1.71
PRPF38A-203ENST00000487160 APLFQ8IW19 511 aaPredicted RBP4.39□□□□□ -1.71
PRPF38A-203ENST00000487160 FAM89BQ8N5H3 189 aa4.39□□□□□ -1.71
PRPF38A-203ENST00000487160 ARL10Q8N8L6 244 aa4.39□□□□□ -1.71
PRPF38A-203ENST00000487160 NIPA2Q8N8Q9 360 aa4.39□□□□□ -1.71
PRPF38A-203ENST00000487160 CNBD1Q8NA66 436 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms