RNA–Protein interactions for RNA: ENST00000485024.1

VPS8-223, Transcript of VPS8, CORVET complex subunit, human

TSL 2

Gene VPS8, Length 477 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS8-223	ENST00000485024	GAS8	O95995	478 aa		3.54	□□□□□ -1.84
VPS8-223	ENST00000485024	NR3C1	P04150	777 aa		3.54	□□□□□ -1.84
VPS8-223	ENST00000485024	SERPING1	P05155	500 aa		3.54	□□□□□ -1.84
VPS8-223	ENST00000485024	YES1	P07947	543 aa		3.54	□□□□□ -1.84
VPS8-223	ENST00000485024	MMP10	P09238	476 aa		3.54	□□□□□ -1.84
VPS8-223	ENST00000485024	SBK2	P0C263	348 aa		3.54	□□□□□ -1.84
VPS8-223	ENST00000485024	CCDC192	P0DO97	292 aa		3.54	□□□□□ -1.84
VPS8-223	ENST00000485024	CPA3	P15088	417 aa		3.54	□□□□□ -1.84
VPS8-223	ENST00000485024	ZNF18	P17022	549 aa		3.54	□□□□□ -1.84
VPS8-223	ENST00000485024	MSH3	P20585	1137 aa		3.54	□□□□□ -1.84
VPS8-223	ENST00000485024	CA4	P22748	312 aa		3.54	□□□□□ -1.84
VPS8-223	ENST00000485024	DGKA	P23743	735 aa		3.54	□□□□□ -1.84
VPS8-223	ENST00000485024	SERPINB6	P35237	376 aa		3.54	□□□□□ -1.84
VPS8-223	ENST00000485024	CASP9	P55211	416 aa		3.54	□□□□□ -1.84
VPS8-223	ENST00000485024	HUNK	P57058	714 aa		3.54	□□□□□ -1.84
VPS8-223	ENST00000485024	STARD6	P59095	220 aa		3.54	□□□□□ -1.84
VPS8-223	ENST00000485024	MYL7	Q01449	175 aa		3.54	□□□□□ -1.84
VPS8-223	ENST00000485024	SLC3A1	Q07837	685 aa		3.54	□□□□□ -1.84
VPS8-223	ENST00000485024	FGD3	Q5JSP0	725 aa		3.54	□□□□□ -1.84
VPS8-223	ENST00000485024	LCN1P1	Q5VSP4	162 aa		3.54	□□□□□ -1.84
VPS8-223	ENST00000485024	AGAP6	Q5VW22	663 aa		3.54	□□□□□ -1.84
VPS8-223	ENST00000485024	TTC27	Q6P3X3	843 aa		3.54	□□□□□ -1.84
VPS8-223	ENST00000485024	PODNL1	Q6PEZ8	512 aa		3.54	□□□□□ -1.84
VPS8-223	ENST00000485024	PRUNE1	Q86TP1	453 aa		3.54	□□□□□ -1.84
VPS8-223	ENST00000485024	NFE4	Q86UQ8	179 aa		3.54	□□□□□ -1.84
VPS8-223	ENST00000485024	CNTN4	Q8IWV2	1026 aa		3.54	□□□□□ -1.84
VPS8-223	ENST00000485024	DNAJC22	Q8N4W6	341 aa		3.54	□□□□□ -1.84
VPS8-223	ENST00000485024	MAB21L3	Q8N8X9	362 aa		3.54	□□□□□ -1.84
VPS8-223	ENST00000485024	DMBX1	Q8NFW5	382 aa		3.54	□□□□□ -1.84
VPS8-223	ENST00000485024	OR10Q1	Q8NGQ4	319 aa		3.54	□□□□□ -1.84
VPS8-223	ENST00000485024	GRHL3	Q8TE85	626 aa		3.54	□□□□□ -1.84
VPS8-223	ENST00000485024	SLC47A1	Q96FL8	570 aa		3.54	□□□□□ -1.84
VPS8-223	ENST00000485024	DOCK7	Q96N67	2140 aa		3.54	□□□□□ -1.84
VPS8-223	ENST00000485024	ZNF583	Q96ND8	569 aa		3.54	□□□□□ -1.84
VPS8-223	ENST00000485024	BTBD9	Q96Q07	612 aa		3.54	□□□□□ -1.84
VPS8-223	ENST00000485024	RASL10B	Q96S79	203 aa		3.54	□□□□□ -1.84
VPS8-223	ENST00000485024	OSBPL8	Q9BZF1	889 aa		3.54	□□□□□ -1.84
VPS8-223	ENST00000485024	LAT2	Q9GZY6	243 aa		3.54	□□□□□ -1.84
VPS8-223	ENST00000485024	TSPYL1	Q9H0U9	437 aa		3.54	□□□□□ -1.84
VPS8-223	ENST00000485024	RIMS4	Q9H426	269 aa	Predicted RBP	3.54	□□□□□ -1.84
VPS8-223	ENST00000485024	DDX31	Q9H8H2	851 aa	Known RBP	3.54	□□□□□ -1.84
VPS8-223	ENST00000485024	SDR39U1	Q9NRG7	319 aa	Predicted RBP	3.54	□□□□□ -1.84
VPS8-223	ENST00000485024	PNPLA3	Q9NST1	481 aa		3.54	□□□□□ -1.84
VPS8-223	ENST00000485024	MIS18A	Q9NYP9	233 aa		3.54	□□□□□ -1.84
VPS8-223	ENST00000485024	PTTG2	Q9NZH5	202 aa		3.54	□□□□□ -1.84
VPS8-223	ENST00000485024	TRIM10	Q9UDY6	481 aa		3.54	□□□□□ -1.84
VPS8-223	ENST00000485024	IL36A	Q9UHA7	158 aa		3.54	□□□□□ -1.84
VPS8-223	ENST00000485024	GRID1	Q9ULK0	1009 aa		3.54	□□□□□ -1.84
VPS8-223	ENST00000485024	AGTPBP1	Q9UPW5	1226 aa		3.54	□□□□□ -1.84
VPS8-223	ENST00000485024	CEP290	O15078	2479 aa		3.54	□□□□□ -1.84
VPS8-223	ENST00000485024	PTPN13	Q12923	2485 aa		3.54	□□□□□ -1.84
VPS8-223	ENST00000485024	FAM208B	Q5VWN6	2430 aa		3.54	□□□□□ -1.84
VPS8-223	ENST00000485024	C2CD4D	B7Z1M9	353 aa		3.53	□□□□□ -1.84
VPS8-223	ENST00000485024	EPHB6	O15197	1021 aa		3.53	□□□□□ -1.84
VPS8-223	ENST00000485024	ATP6V0E1	O15342	81 aa		3.53	□□□□□ -1.84
VPS8-223	ENST00000485024	PRPSAP2	O60256	369 aa		3.53	□□□□□ -1.84
VPS8-223	ENST00000485024	B3GALNT1	O75752	331 aa		3.53	□□□□□ -1.84
VPS8-223	ENST00000485024	BCAS2	O75934	225 aa	Predicted RBP	3.53	□□□□□ -1.84
VPS8-223	ENST00000485024	BAG3	O95817	575 aa		3.53	□□□□□ -1.84
VPS8-223	ENST00000485024	RAF1	P04049	648 aa		3.53	□□□□□ -1.84
VPS8-223	ENST00000485024	ATP1A1	P05023	1023 aa	Known RBP	3.53	□□□□□ -1.84
VPS8-223	ENST00000485024	IGHV4-31	P0DP07	118 aa		3.53	□□□□□ -1.84
VPS8-223	ENST00000485024	LIF	P15018	202 aa		3.53	□□□□□ -1.84
VPS8-223	ENST00000485024	ARF4	P18085	180 aa	Predicted RBP	3.53	□□□□□ -1.84
VPS8-223	ENST00000485024	ALDH4A1	P30038	563 aa		3.53	□□□□□ -1.84
VPS8-223	ENST00000485024	SSTR1	P30872	391 aa		3.53	□□□□□ -1.84
VPS8-223	ENST00000485024	ZNF132	P52740	706 aa		3.53	□□□□□ -1.84
VPS8-223	ENST00000485024	BPIFB3	P59826	476 aa		3.53	□□□□□ -1.84
VPS8-223	ENST00000485024	ERVFC1-1	P60608	527 aa		3.53	□□□□□ -1.84
VPS8-223	ENST00000485024	RPP38	P78345	283 aa	Known RBP	3.53	□□□□□ -1.84
VPS8-223	ENST00000485024	TAF10	Q12962	218 aa		3.53	□□□□□ -1.84
VPS8-223	ENST00000485024	ABR	Q12979	859 aa		3.53	□□□□□ -1.84
VPS8-223	ENST00000485024	LCP2	Q13094	533 aa		3.53	□□□□□ -1.84
VPS8-223	ENST00000485024	UGP2	Q16851	508 aa		3.53	□□□□□ -1.84
VPS8-223	ENST00000485024	KRTAP21-3	Q3LHN1	58 aa		3.53	□□□□□ -1.84
VPS8-223	ENST00000485024	PHLDA2	Q53GA4	152 aa		3.53	□□□□□ -1.84
VPS8-223	ENST00000485024	ARMCX4	Q5H9R4	360 aa		3.53	□□□□□ -1.84
VPS8-223	ENST00000485024	SPDYC	Q5MJ68	293 aa		3.53	□□□□□ -1.84
VPS8-223	ENST00000485024	LCE3E	Q5T5B0	92 aa		3.53	□□□□□ -1.84
VPS8-223	ENST00000485024	SUSD4	Q5VX71	490 aa		3.53	□□□□□ -1.84
VPS8-223	ENST00000485024	PRSS55	Q6UWB4	352 aa	Predicted RBP	3.53	□□□□□ -1.84
VPS8-223	ENST00000485024	CD164L2	Q6UWJ8	174 aa		3.53	□□□□□ -1.84
VPS8-223	ENST00000485024	MACC1	Q6ZN28	852 aa		3.53	□□□□□ -1.84
VPS8-223	ENST00000485024	C16orf82	Q7Z2V1	217 aa		3.53	□□□□□ -1.84
VPS8-223	ENST00000485024	ANKRD33	Q7Z3H0	272 aa		3.53	□□□□□ -1.84
VPS8-223	ENST00000485024	ADCK1	Q86TW2	530 aa		3.53	□□□□□ -1.84
VPS8-223	ENST00000485024	RTN4RL2	Q86UN3	420 aa		3.53	□□□□□ -1.84
VPS8-223	ENST00000485024	ZNF410	Q86VK4	478 aa		3.53	□□□□□ -1.84
VPS8-223	ENST00000485024	TMEM126B	Q8IUX1	230 aa		3.53	□□□□□ -1.84
VPS8-223	ENST00000485024	CROCCP3	Q8IVE0	287 aa		3.53	□□□□□ -1.84
VPS8-223	ENST00000485024	RCOR2	Q8IZ40	523 aa		3.53	□□□□□ -1.84
VPS8-223	ENST00000485024	EID3	Q8N140	333 aa		3.53	□□□□□ -1.84
VPS8-223	ENST00000485024	BATF2	Q8N1L9	274 aa		3.53	□□□□□ -1.84
VPS8-223	ENST00000485024	TEX9	Q8N6V9	391 aa		3.53	□□□□□ -1.84
VPS8-223	ENST00000485024	TMEM99	Q8N816	258 aa		3.53	□□□□□ -1.84
VPS8-223	ENST00000485024	SLC13A3	Q8WWT9	602 aa		3.53	□□□□□ -1.84
VPS8-223	ENST00000485024	SORCS1	Q8WY21	1168 aa		3.53	□□□□□ -1.84
VPS8-223	ENST00000485024	TBC1D31	Q96DN5	1066 aa		3.53	□□□□□ -1.84
VPS8-223	ENST00000485024	ST6GAL2	Q96JF0	529 aa		3.53	□□□□□ -1.84
VPS8-223	ENST00000485024	RUNDC3B	Q96NL0	473 aa		3.53	□□□□□ -1.84

Retrieved 100 of 20,778 RNA–protein pairs in 35 ms