RNA–Protein interactions for RNA: ENST00000481522.1

COPA-204, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-204ENST00000481522 FUCA2Q9BTY2 467 aa3.19□□□□□ -1.9
COPA-204ENST00000481522 ZMYND12Q9H0C1 365 aa3.19□□□□□ -1.9
COPA-204ENST00000481522 OR10A4Q9H209 315 aa3.19□□□□□ -1.9
COPA-204ENST00000481522 ERVMER34-1Q9H9K5 563 aa3.19□□□□□ -1.9
COPA-204ENST00000481522 ZDHHC18Q9NUE0 388 aa3.19□□□□□ -1.9
COPA-204ENST00000481522 TXNDC16Q9P2K2 825 aa3.19□□□□□ -1.9
COPA-204ENST00000481522 EPHA6Q9UF33 1036 aa3.19□□□□□ -1.9
COPA-204ENST00000481522 RASAL2Q9UJF2 1139 aa3.19□□□□□ -1.9
COPA-204ENST00000481522 MAN1B1Q9UKM7 699 aa3.19□□□□□ -1.9
COPA-204ENST00000481522 WDR83OSQ9Y284 106 aa3.19□□□□□ -1.9
COPA-204ENST00000481522 PYGO1Q9Y3Y4 419 aa3.19□□□□□ -1.9
COPA-204ENST00000481522 ACACAQ13085 2346 aa3.19□□□□□ -1.9
COPA-204ENST00000481522 MGAM2Q2M2H8 2515 aa3.18□□□□□ -1.9
COPA-204ENST00000481522 EPOPA6NHQ4 379 aa3.18□□□□□ -1.9
COPA-204ENST00000481522 AP5Z1O43299 807 aa3.18□□□□□ -1.9
COPA-204ENST00000481522 ZNF500O60304 480 aaPredicted RBP3.18□□□□□ -1.9
COPA-204ENST00000481522 DKC1O60832 514 aaKnown RBP eCLIP3.18□□□□□ -1.9
COPA-204ENST00000481522 KHDRBS3O75525 346 aaKnown RBP3.18□□□□□ -1.9
COPA-204ENST00000481522 CDK2AP2O75956 126 aa3.18□□□□□ -1.9
COPA-204ENST00000481522 CSN3P07498 182 aa3.18□□□□□ -1.9
COPA-204ENST00000481522 MYL6BP14649 208 aa3.18□□□□□ -1.9
COPA-204ENST00000481522 DARSP14868 501 aaKnown RBP3.18□□□□□ -1.9
COPA-204ENST00000481522 EPCAMP16422 314 aa3.18□□□□□ -1.9
COPA-204ENST00000481522 TYMPP19971 482 aa3.18□□□□□ -1.9
COPA-204ENST00000481522 AZGP1P25311 298 aaKnown RBP3.18□□□□□ -1.9
COPA-204ENST00000481522 SLC6A12P48065 614 aa3.18□□□□□ -1.9
COPA-204ENST00000481522 LUMP51884 338 aaPredicted RBP3.18□□□□□ -1.9
COPA-204ENST00000481522 NPTX1Q15818 432 aa3.18□□□□□ -1.9
COPA-204ENST00000481522 XKR3Q5GH77 459 aa3.18□□□□□ -1.9
COPA-204ENST00000481522 C1orf141Q5JVX7 400 aa3.18□□□□□ -1.9
COPA-204ENST00000481522 TMEM207Q6UWW9 146 aa3.18□□□□□ -1.9
COPA-204ENST00000481522 MYPOPQ86VE0 399 aaPredicted RBP3.18□□□□□ -1.9
COPA-204ENST00000481522 KRTAP7-1Q8IUC3 87 aa3.18□□□□□ -1.9
COPA-204ENST00000481522 LACC1Q8IV20 430 aa3.18□□□□□ -1.9
COPA-204ENST00000481522 NOA1Q8NC60 698 aaKnown RBP3.18□□□□□ -1.9
COPA-204ENST00000481522 GPRC5AQ8NFJ5 357 aa3.18□□□□□ -1.9
COPA-204ENST00000481522 ARHGAP45Q92619 1136 aa3.18□□□□□ -1.9
COPA-204ENST00000481522 PROX1Q92786 737 aa3.18□□□□□ -1.9
COPA-204ENST00000481522 EXT2Q93063 718 aa3.18□□□□□ -1.9
COPA-204ENST00000481522 RMDN2Q96LZ7 410 aa3.18□□□□□ -1.9
COPA-204ENST00000481522 LINC00479Q96M42 142 aa3.18□□□□□ -1.9
COPA-204ENST00000481522 BAG1Q99933 345 aaPredicted RBP3.18□□□□□ -1.9
COPA-204ENST00000481522 NAA11Q9BSU3 229 aaPredicted RBP3.18□□□□□ -1.9
COPA-204ENST00000481522 MCRIP2Q9BUT9 160 aaKnown RBP3.18□□□□□ -1.9
COPA-204ENST00000481522 ANKRD2Q9GZV1 360 aa3.18□□□□□ -1.9
COPA-204ENST00000481522 SHARPINQ9H0F6 387 aa3.18□□□□□ -1.9
COPA-204ENST00000481522 ATP13A3Q9H7F0 1226 aa3.18□□□□□ -1.9
COPA-204ENST00000481522 TLE6Q9H808 572 aa3.18□□□□□ -1.9
COPA-204ENST00000481522 UBE2ZQ9H832 354 aaPredicted RBP3.18□□□□□ -1.9
COPA-204ENST00000481522 Q9H8V8 135 aa3.18□□□□□ -1.9
COPA-204ENST00000481522 PLCXD1Q9NUJ7 323 aa3.18□□□□□ -1.9
COPA-204ENST00000481522 BARHL2Q9NY43 387 aa3.18□□□□□ -1.9
COPA-204ENST00000481522 KLHL8Q9P2G9 620 aaPredicted RBP3.18□□□□□ -1.9
COPA-204ENST00000481522 WDR37Q9Y2I8 494 aa3.18□□□□□ -1.9
COPA-204ENST00000481522 PHIPQ8WWQ0 1821 aa3.18□□□□□ -1.9
COPA-204ENST00000481522 MUC2Q02817 5179 aa3.18□□□□□ -1.9
COPA-204ENST00000481522 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.18□□□□□ -1.96e-6■□□□□ 8.2
COPA-204ENST00000481522 A0A087X002 238 aa3.17□□□□□ -1.9
COPA-204ENST00000481522 MSGN1A6NI15 193 aa3.17□□□□□ -1.9
COPA-204ENST00000481522 RPS6KA5O75582 802 aa3.17□□□□□ -1.9
COPA-204ENST00000481522 RECQL5O94762 991 aaPredicted RBP3.17□□□□□ -1.9
COPA-204ENST00000481522 DDHD2O94830 711 aa3.17□□□□□ -1.9
COPA-204ENST00000481522 APOA4P06727 396 aa3.17□□□□□ -1.9
COPA-204ENST00000481522 KRT5P13647 590 aa3.17□□□□□ -1.9
COPA-204ENST00000481522 NKX2-1P43699 371 aaPredicted RBP3.17□□□□□ -1.9
COPA-204ENST00000481522 VAMP7P51809 220 aa3.17□□□□□ -1.9
COPA-204ENST00000481522 GCNT1Q02742 428 aa3.17□□□□□ -1.9
COPA-204ENST00000481522 OR4A47Q6IF82 309 aa3.17□□□□□ -1.9
COPA-204ENST00000481522 UGT3A1Q6NUS8 523 aa3.17□□□□□ -1.9
COPA-204ENST00000481522 PPP1R21Q6ZMI0 780 aa3.17□□□□□ -1.9
COPA-204ENST00000481522 ERN2Q76MJ5 926 aaKnown RBP3.17□□□□□ -1.9
COPA-204ENST00000481522 RASGEF1AQ8N9B8 481 aa3.17□□□□□ -1.9
COPA-204ENST00000481522 SUMF1Q8NBK3 374 aa3.17□□□□□ -1.9
COPA-204ENST00000481522 VANGL1Q8TAA9 524 aaPredicted RBP3.17□□□□□ -1.9
COPA-204ENST00000481522 KCNE4Q8WWG9 221 aa3.17□□□□□ -1.9
COPA-204ENST00000481522 CLEC7AQ9BXN2 247 aa3.17□□□□□ -1.9
COPA-204ENST00000481522 AP1M1Q9BXS5 423 aa3.17□□□□□ -1.9
COPA-204ENST00000481522 SLC2A11Q9BYW1 496 aa3.17□□□□□ -1.9
COPA-204ENST00000481522 UPF3BQ9BZI7 483 aaKnown RBP3.17□□□□□ -1.9
COPA-204ENST00000481522 FN3KQ9H479 309 aa3.17□□□□□ -1.9
COPA-204ENST00000481522 XAB2Q9HCS7 855 aaKnown RBP3.17□□□□□ -1.9
COPA-204ENST00000481522 GSN-AS1Q9NRJ2 163 aa3.17□□□□□ -1.9
COPA-204ENST00000481522 CHKBQ9Y259 395 aa3.17□□□□□ -1.9
COPA-204ENST00000481522 EXOGQ9Y2C4 368 aaKnown RBP3.17□□□□□ -1.9
COPA-204ENST00000481522 APC2O95996 2303 aa3.16□□□□□ -1.9
COPA-204ENST00000481522 MEGF8Q7Z7M0 2845 aa3.16□□□□□ -1.9
COPA-204ENST00000481522 VPS13CQ709C8 3753 aa3.16□□□□□ -1.9
COPA-204ENST00000481522 TRAV24A0A0B4J272 114 aa3.16□□□□□ -1.9
COPA-204ENST00000481522 A0A0J9YWU9 116 aa3.16□□□□□ -1.9
COPA-204ENST00000481522 A0A1W2PPK0 400 aa3.16□□□□□ -1.9
COPA-204ENST00000481522 CASTOR2A6NHX0 329 aa3.16□□□□□ -1.9
COPA-204ENST00000481522 EXTL3O43909 919 aa3.16□□□□□ -1.9
COPA-204ENST00000481522 SNX3O60493 162 aa3.16□□□□□ -1.9
COPA-204ENST00000481522 SLC2A2P11168 524 aaPredicted RBP3.16□□□□□ -1.9
COPA-204ENST00000481522 FDPSP14324 419 aaKnown RBP3.16□□□□□ -1.9
COPA-204ENST00000481522 LHCGRP22888 699 aa3.16□□□□□ -1.9
COPA-204ENST00000481522 HSD17B3P37058 310 aa3.16□□□□□ -1.9
COPA-204ENST00000481522 GSDMDP57764 484 aa3.16□□□□□ -1.9
COPA-204ENST00000481522 DLK1P80370 383 aa3.16□□□□□ -1.9
COPA-204ENST00000481522 MYL7Q01449 175 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms