RNA–Protein interactions for RNA: ENST00000481242.5

GARNL3-216, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 4,816 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-216ENST00000481242 WASH4PA8MWX3 477 aa9.13□□□□□ -0.95
GARNL3-216ENST00000481242 BTN3A3O00478 584 aa9.13□□□□□ -0.95
GARNL3-216ENST00000481242 PCDHGA12O60330 932 aa9.13□□□□□ -0.95
GARNL3-216ENST00000481242 TSC22D2O75157 780 aa9.13□□□□□ -0.95
GARNL3-216ENST00000481242 PPM1BO75688 479 aa9.13□□□□□ -0.95
GARNL3-216ENST00000481242 SYNGR4O95473 234 aa9.13□□□□□ -0.95
GARNL3-216ENST00000481242 BCHEP06276 602 aa9.13□□□□□ -0.95
GARNL3-216ENST00000481242 THEGLP0DJG4 465 aa9.13□□□□□ -0.95
GARNL3-216ENST00000481242 ZNF20P17024 532 aa9.13□□□□□ -0.95
GARNL3-216ENST00000481242 EFNA1P20827 205 aaPredicted RBP9.13□□□□□ -0.95
GARNL3-216ENST00000481242 SLC6A6P31641 620 aa9.13□□□□□ -0.95
GARNL3-216ENST00000481242 GDF5P43026 501 aa9.13□□□□□ -0.95
GARNL3-216ENST00000481242 AKR1D1P51857 326 aa9.13□□□□□ -0.95
GARNL3-216ENST00000481242 MRPS21P82921 87 aaKnown RBP9.13□□□□□ -0.95
GARNL3-216ENST00000481242 TRAM2Q15035 370 aa9.13□□□□□ -0.95
GARNL3-216ENST00000481242 KCTD19Q17RG1 926 aaPredicted RBP9.13□□□□□ -0.95
GARNL3-216ENST00000481242 LRIF1Q5T3J3 769 aa9.13□□□□□ -0.95
GARNL3-216ENST00000481242 SMARCD3Q6STE5 483 aa9.13□□□□□ -0.95
GARNL3-216ENST00000481242 FAM86B1Q8N7N1 296 aa9.13□□□□□ -0.95
GARNL3-216ENST00000481242 CMKLR1Q99788 373 aa9.13□□□□□ -0.95
GARNL3-216ENST00000481242 DKKL1Q9UK85 242 aa9.13□□□□□ -0.95
GARNL3-216ENST00000481242 CA14Q9ULX7 337 aa9.13□□□□□ -0.95
GARNL3-216ENST00000481242 CPSF4LA6NMK7 179 aaKnown RBP9.13□□□□□ -0.95
GARNL3-216ENST00000481242 WRBO00258 174 aa9.13□□□□□ -0.95
GARNL3-216ENST00000481242 SRCP12931 536 aa9.13□□□□□ -0.95
GARNL3-216ENST00000481242 ATF4P18848 351 aaPredicted RBP9.13□□□□□ -0.95
GARNL3-216ENST00000481242 MATN1P21941 496 aa9.13□□□□□ -0.95
GARNL3-216ENST00000481242 ITGB7P26010 798 aa9.13□□□□□ -0.95
GARNL3-216ENST00000481242 TIA1P31483 386 aaKnown RBP eCLIP9.13□□□□□ -0.95
GARNL3-216ENST00000481242 YAP1P46937 504 aaKnown RBP9.13□□□□□ -0.95
GARNL3-216ENST00000481242 CXCL12P48061 93 aa9.13□□□□□ -0.95
GARNL3-216ENST00000481242 RAB2AP61019 212 aa9.13□□□□□ -0.95
GARNL3-216ENST00000481242 GBX1Q14549 363 aa9.13□□□□□ -0.95
GARNL3-216ENST00000481242 SF3B4Q15427 424 aaKnown RBP eCLIP9.13□□□□□ -0.95
GARNL3-216ENST00000481242 PRPF38BQ5VTL8 546 aaKnown RBP9.13□□□□□ -0.95
GARNL3-216ENST00000481242 FIP1L1Q6UN15 594 aaKnown RBP9.13□□□□□ -0.95
GARNL3-216ENST00000481242 FAM131AQ6UXB0 335 aa9.13□□□□□ -0.95
GARNL3-216ENST00000481242 CHST4Q8NCG5 386 aa9.13□□□□□ -0.95
GARNL3-216ENST00000481242 CCDC54Q8NEL0 328 aa9.13□□□□□ -0.95
GARNL3-216ENST00000481242 KAT8Q9H7Z6 458 aaKnown RBP9.13□□□□□ -0.95
GARNL3-216ENST00000481242 ABCB10Q9NRK6 738 aa9.13□□□□□ -0.95
GARNL3-216ENST00000481242 FAM240BA0A1B0GVZ2 78 aa9.13□□□□□ -0.95
GARNL3-216ENST00000481242 CLDN25C9JDP6 229 aa9.13□□□□□ -0.95
GARNL3-216ENST00000481242 MUSKO15146 869 aa9.13□□□□□ -0.95
GARNL3-216ENST00000481242 GMFGO60234 142 aa9.13□□□□□ -0.95
GARNL3-216ENST00000481242 CCNKO75909 580 aa9.13□□□□□ -0.95
GARNL3-216ENST00000481242 ARL6IP5O75915 188 aa9.13□□□□□ -0.95
GARNL3-216ENST00000481242 C9P02748 559 aa9.13□□□□□ -0.95
GARNL3-216ENST00000481242 FHP07954 510 aa9.13□□□□□ -0.95
GARNL3-216ENST00000481242 RPS3P23396 243 aaKnown RBP eCLIP9.13□□□□□ -0.95
GARNL3-216ENST00000481242 CSNK1DP48730 415 aa9.13□□□□□ -0.95
GARNL3-216ENST00000481242 VSX2P58304 361 aaPredicted RBP9.13□□□□□ -0.95
GARNL3-216ENST00000481242 LASP1Q14847 261 aaKnown RBP9.13□□□□□ -0.95
GARNL3-216ENST00000481242 HSF5Q4G112 596 aaPredicted RBP9.13□□□□□ -0.95
GARNL3-216ENST00000481242 CATSPEREQ5SY80 951 aa9.13□□□□□ -0.95
GARNL3-216ENST00000481242 RPL13AP3Q6NVV1 102 aa9.13□□□□□ -0.95
GARNL3-216ENST00000481242 RASSF6Q6ZTQ3 369 aa9.13□□□□□ -0.95
GARNL3-216ENST00000481242 CSNK1A1LQ8N752 337 aa9.13□□□□□ -0.95
GARNL3-216ENST00000481242 ZNF676Q8N7Q3 588 aa9.13□□□□□ -0.95
GARNL3-216ENST00000481242 PSMA8Q8TAA3 256 aa9.13□□□□□ -0.95
GARNL3-216ENST00000481242 LRCH3Q96II8 777 aa9.13□□□□□ -0.95
GARNL3-216ENST00000481242 CASD1Q96PB1 797 aa9.13□□□□□ -0.95
GARNL3-216ENST00000481242 AIFM2Q9BRQ8 373 aa9.13□□□□□ -0.95
GARNL3-216ENST00000481242 CPEB1Q9BZB8 566 aaKnown RBP9.13□□□□□ -0.95
GARNL3-216ENST00000481242 KIAA0100Q14667 2235 aaKnown RBP9.13□□□□□ -0.95
GARNL3-216ENST00000481242 OR6C74A6NCV1 312 aa9.12□□□□□ -0.95
GARNL3-216ENST00000481242 TRIM64A6NGJ6 449 aa9.12□□□□□ -0.95
GARNL3-216ENST00000481242 TRIM64BA6NI03 449 aa9.12□□□□□ -0.95
GARNL3-216ENST00000481242 ZNF208O43345 1280 aa9.12□□□□□ -0.95
GARNL3-216ENST00000481242 TRAPPC6AO75865 159 aa9.12□□□□□ -0.95
GARNL3-216ENST00000481242 C8BP07358 591 aa9.12□□□□□ -0.95
GARNL3-216ENST00000481242 GSTT2BP0CG30 244 aa9.12□□□□□ -0.95
GARNL3-216ENST00000481242 EPCAMP16422 314 aa9.12□□□□□ -0.95
GARNL3-216ENST00000481242 PEX2P28328 305 aa9.12□□□□□ -0.95
GARNL3-216ENST00000481242 KCNJ5P48544 419 aa9.12□□□□□ -0.95
GARNL3-216ENST00000481242 GSK3BP49841 420 aa9.12□□□□□ -0.95
GARNL3-216ENST00000481242 VLDLRP98155 873 aa9.12□□□□□ -0.95
GARNL3-216ENST00000481242 PLP2Q04941 152 aa9.12□□□□□ -0.95
GARNL3-216ENST00000481242 CD47Q08722 323 aa9.12□□□□□ -0.95
GARNL3-216ENST00000481242 PON2Q15165 354 aa9.12□□□□□ -0.95
GARNL3-216ENST00000481242 FAM26DQ5JW98 314 aa9.12□□□□□ -0.95
GARNL3-216ENST00000481242 TMEM214Q6NUQ4 689 aaKnown RBP9.12□□□□□ -0.95
GARNL3-216ENST00000481242 NOXRED1Q6NXP6 359 aa9.12□□□□□ -0.95
GARNL3-216ENST00000481242 SUSD1Q6UWL2 747 aa9.12□□□□□ -0.95
GARNL3-216ENST00000481242 ZFAND4Q86XD8 727 aa9.12□□□□□ -0.95
GARNL3-216ENST00000481242 TMEM174Q8WUU8 243 aa9.12□□□□□ -0.95
GARNL3-216ENST00000481242 LRTOMTQ8WZ04 291 aa9.12□□□□□ -0.95
GARNL3-216ENST00000481242 NAT6Q93015 286 aa9.12□□□□□ -0.95
GARNL3-216ENST00000481242 TMCO6Q96DC7 493 aa9.12□□□□□ -0.95
GARNL3-216ENST00000481242 RTP4Q96DX8 246 aa9.12□□□□□ -0.95
GARNL3-216ENST00000481242 DPH7Q9BTV6 452 aa9.12□□□□□ -0.95
GARNL3-216ENST00000481242 LMAN1LQ9HAT1 526 aa9.12□□□□□ -0.95
GARNL3-216ENST00000481242 ZBTB26Q9HCK0 441 aa9.12□□□□□ -0.95
GARNL3-216ENST00000481242 ING3Q9NXR8 418 aa9.12□□□□□ -0.95
GARNL3-216ENST00000481242 ZDHHC2Q9UIJ5 367 aa9.12□□□□□ -0.95
GARNL3-216ENST00000481242 MGAT4BQ9UQ53 548 aa9.12□□□□□ -0.95
GARNL3-216ENST00000481242 KIR2DS5A0A0G2JLQ3 304 aa9.12□□□□□ -0.95
GARNL3-216ENST00000481242 A0A0G2JNG1 304 aa9.12□□□□□ -0.95
GARNL3-216ENST00000481242 KIR2DS3K7RE56 304 aa9.12□□□□□ -0.95
GARNL3-216ENST00000481242 FBP2O00757 339 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms