RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 OXA1LQ15070 435 aa10.36□□□□□ -0.75
VPS52-217ENST00000478934 EXOC3L2Q2M3D2 409 aa10.36□□□□□ -0.75
VPS52-217ENST00000478934 ERICH5Q6P6B1 374 aa10.36□□□□□ -0.75
VPS52-217ENST00000478934 WASH2PQ6VEQ5 465 aa10.36□□□□□ -0.75
VPS52-217ENST00000478934 VN1R5Q7Z5H4 357 aa10.36□□□□□ -0.75
VPS52-217ENST00000478934 PLD3Q8IV08 490 aa10.36□□□□□ -0.75
VPS52-217ENST00000478934 SLC44A2Q8IWA5 706 aaPredicted RBP10.36□□□□□ -0.75
VPS52-217ENST00000478934 PGBD3Q8N328 593 aa10.36□□□□□ -0.75
VPS52-217ENST00000478934 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.36□□□□□ -0.75
VPS52-217ENST00000478934 POF1BQ8WVV4 589 aa10.36□□□□□ -0.75
VPS52-217ENST00000478934 ATL1Q8WXF7 558 aa10.36□□□□□ -0.75
VPS52-217ENST00000478934 HTRA1Q92743 480 aa10.36□□□□□ -0.75
VPS52-217ENST00000478934 ZNF566Q969W8 418 aa10.36□□□□□ -0.75
VPS52-217ENST00000478934 DOHHQ9BU89 302 aa10.36□□□□□ -0.75
VPS52-217ENST00000478934 C6orf62Q9GZU0 229 aaPredicted RBP10.36□□□□□ -0.75
VPS52-217ENST00000478934 BTNL2Q9UIR0 455 aa10.36□□□□□ -0.75
VPS52-217ENST00000478934 RBMX2Q9Y388 322 aaKnown RBP10.36□□□□□ -0.75
VPS52-217ENST00000478934 LYVE1Q9Y5Y7 322 aa10.36□□□□□ -0.75
VPS52-217ENST00000478934 KIAA1671Q9BY89 1806 aa10.35□□□□□ -0.75
VPS52-217ENST00000478934 ALPK3Q96L96 1907 aa10.35□□□□□ -0.75
VPS52-217ENST00000478934 POP7O75817 140 aaKnown RBP10.35□□□□□ -0.75
VPS52-217ENST00000478934 DNTTP04053 509 aa10.35□□□□□ -0.75
VPS52-217ENST00000478934 IL3P08700 152 aa10.35□□□□□ -0.75
VPS52-217ENST00000478934 ADRA2AP08913 450 aa10.35□□□□□ -0.75
VPS52-217ENST00000478934 GADD45AP24522 165 aa10.35□□□□□ -0.75
VPS52-217ENST00000478934 SOAT1P35610 550 aa10.35□□□□□ -0.75
VPS52-217ENST00000478934 SELENOWP63302 87 aa10.35□□□□□ -0.75
VPS52-217ENST00000478934 IL18R1Q13478 541 aa10.35□□□□□ -0.75
VPS52-217ENST00000478934 VEZF1Q14119 521 aa10.35□□□□□ -0.75
VPS52-217ENST00000478934 UAP1L1Q3KQV9 507 aa10.35□□□□□ -0.75
VPS52-217ENST00000478934 RPS26P11Q5JNZ5 115 aaPredicted RBP10.35□□□□□ -0.75
VPS52-217ENST00000478934 COLEC12Q5KU26 742 aa10.35□□□□□ -0.75
VPS52-217ENST00000478934 OLIG3Q7RTU3 272 aa10.35□□□□□ -0.75
VPS52-217ENST00000478934 KIAA0907Q7Z7F0 614 aaPredicted RBP10.35□□□□□ -0.75
VPS52-217ENST00000478934 SLC22A16Q86VW1 577 aa10.35□□□□□ -0.75
VPS52-217ENST00000478934 NLRP8Q86W28 1048 aa10.35□□□□□ -0.75
VPS52-217ENST00000478934 OR5AR1Q8NGP9 310 aa10.35□□□□□ -0.75
VPS52-217ENST00000478934 C16orf78Q8WTQ4 265 aa10.35□□□□□ -0.75
VPS52-217ENST00000478934 HPS1Q92902 700 aa10.35□□□□□ -0.75
VPS52-217ENST00000478934 GTPBP3Q969Y2 492 aaKnown RBP10.35□□□□□ -0.75
VPS52-217ENST00000478934 ZHX1-C8orf76Q96EF9 292 aa10.35□□□□□ -0.75
VPS52-217ENST00000478934 DTD2Q96FN9 168 aa10.35□□□□□ -0.75
VPS52-217ENST00000478934 FOPNLQ96NB1 174 aa10.35□□□□□ -0.75
VPS52-217ENST00000478934 COPS4Q9BT78 406 aa10.35□□□□□ -0.75
VPS52-217ENST00000478934 REEP4Q9H6H4 257 aa10.35□□□□□ -0.75
VPS52-217ENST00000478934 BRF2Q9HAW0 419 aa10.35□□□□□ -0.75
VPS52-217ENST00000478934 DMRT3Q9NQL9 472 aa10.35□□□□□ -0.75
VPS52-217ENST00000478934 MAFFQ9ULX9 164 aa10.35□□□□□ -0.75
VPS52-217ENST00000478934 SNX11Q9Y5W9 270 aa10.35□□□□□ -0.75
VPS52-217ENST00000478934 SNX8Q9Y5X2 465 aa10.35□□□□□ -0.75
VPS52-217ENST00000478934 TSPAN11A1L157 253 aa10.35□□□□□ -0.75
VPS52-217ENST00000478934 SLC22A1O15245 554 aa10.35□□□□□ -0.75
VPS52-217ENST00000478934 TNFRSF21O75509 655 aa10.35□□□□□ -0.75
VPS52-217ENST00000478934 FURINP09958 794 aa10.35□□□□□ -0.75
VPS52-217ENST00000478934 GPR1P46091 355 aa10.35□□□□□ -0.75
VPS52-217ENST00000478934 CLK1P49759 484 aaKnown RBP10.35□□□□□ -0.75
VPS52-217ENST00000478934 SPIBQ01892 262 aa10.35□□□□□ -0.75
VPS52-217ENST00000478934 KCNC4Q03721 635 aa10.35□□□□□ -0.75
VPS52-217ENST00000478934 PPIGQ13427 754 aaKnown RBP eCLIP10.35□□□□□ -0.753e-7■■■■□ 19.8
VPS52-217ENST00000478934 SCARB2Q14108 478 aa10.35□□□□□ -0.75
VPS52-217ENST00000478934 DGUOKQ16854 277 aa10.35□□□□□ -0.75
VPS52-217ENST00000478934 SYT6Q5T7P8 510 aaPredicted RBP10.35□□□□□ -0.75
VPS52-217ENST00000478934 ERAP2Q6P179 960 aa10.35□□□□□ -0.75
VPS52-217ENST00000478934 HMGN2P46Q86SG4 172 aa10.35□□□□□ -0.75
VPS52-217ENST00000478934 TSPYL5Q86VY4 417 aaPredicted RBP10.35□□□□□ -0.75
VPS52-217ENST00000478934 P3H2Q8IVL5 708 aa10.35□□□□□ -0.75
VPS52-217ENST00000478934 REM2Q8IYK8 340 aaPredicted RBP10.35□□□□□ -0.75
VPS52-217ENST00000478934 CLIP4Q8N3C7 705 aa10.35□□□□□ -0.75
VPS52-217ENST00000478934 C11orf65Q8NCR3 313 aa10.35□□□□□ -0.75
VPS52-217ENST00000478934 VPS37AQ8NEZ2 397 aa10.35□□□□□ -0.75
VPS52-217ENST00000478934 OR6Q1Q8NGQ2 317 aa10.35□□□□□ -0.75
VPS52-217ENST00000478934 PPP1R14BQ96C90 147 aa10.35□□□□□ -0.75
VPS52-217ENST00000478934 TIFAQ96CG3 184 aa10.35□□□□□ -0.75
VPS52-217ENST00000478934 COQ10AQ96MF6 247 aa10.35□□□□□ -0.75
VPS52-217ENST00000478934 VPS35Q96QK1 796 aa10.35□□□□□ -0.75
VPS52-217ENST00000478934 SLIRPQ9GZT3 109 aaKnown RBP10.35□□□□□ -0.75
VPS52-217ENST00000478934 ADPRHL2Q9NX46 363 aa10.35□□□□□ -0.75
VPS52-217ENST00000478934 SLC23A2Q9UGH3 650 aa10.35□□□□□ -0.75
VPS52-217ENST00000478934 CAB39Q9Y376 341 aaPredicted RBP10.35□□□□□ -0.75
VPS52-217ENST00000478934 SPEGQ15772 3267 aa10.34□□□□□ -0.75
VPS52-217ENST00000478934 TRANK1O15050 2925 aa10.34□□□□□ -0.75
VPS52-217ENST00000478934 A0A0G2JN53 185 aa10.34□□□□□ -0.75
VPS52-217ENST00000478934 FEZF1A0PJY2 475 aa10.34□□□□□ -0.75
VPS52-217ENST00000478934 OR2A25A4D2G3 310 aa10.34□□□□□ -0.75
VPS52-217ENST00000478934 KPNA4O00629 521 aaPredicted RBP10.34□□□□□ -0.75
VPS52-217ENST00000478934 STSP08842 583 aa10.34□□□□□ -0.75
VPS52-217ENST00000478934 C1GALT1C1LP0DN25 315 aa10.34□□□□□ -0.75
VPS52-217ENST00000478934 C6P13671 934 aa10.34□□□□□ -0.75
VPS52-217ENST00000478934 PSMB5P28074 263 aa10.34□□□□□ -0.75
VPS52-217ENST00000478934 CTNNB1P35222 781 aa10.34□□□□□ -0.75
VPS52-217ENST00000478934 ASMTP46597 345 aa10.34□□□□□ -0.75
VPS52-217ENST00000478934 PRIM2P49643 509 aa10.34□□□□□ -0.75
VPS52-217ENST00000478934 ZNF763Q0D2J5 394 aa10.34□□□□□ -0.75
VPS52-217ENST00000478934 DOC2BQ14184 412 aa10.34□□□□□ -0.75
VPS52-217ENST00000478934 ARHGAP15Q53QZ3 475 aa10.34□□□□□ -0.75
VPS52-217ENST00000478934 SPIN4Q56A73 249 aa10.34□□□□□ -0.75
VPS52-217ENST00000478934 KLHL17Q6TDP4 642 aa10.34□□□□□ -0.75
VPS52-217ENST00000478934 LRRC56Q8IYG6 542 aaPredicted RBP10.34□□□□□ -0.75
VPS52-217ENST00000478934 FAM83FQ8NEG4 500 aaPredicted RBP10.34□□□□□ -0.75
VPS52-217ENST00000478934 TBC1D20Q96BZ9 403 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms