RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 CCM2Q9BSQ5 444 aa5.14□□□□□ -1.59
VPS50-212ENST00000476413 SPXQ9BT56 116 aa5.14□□□□□ -1.59
VPS50-212ENST00000476413 NUSAP1Q9BXS6 441 aaKnown RBP5.14□□□□□ -1.59
VPS50-212ENST00000476413 RPH3AQ9Y2J0 694 aaPredicted RBP5.14□□□□□ -1.59
VPS50-212ENST00000476413 ETV7Q9Y603 341 aa5.14□□□□□ -1.59
VPS50-212ENST00000476413 TCF20Q9UGU0 1960 aaKnown RBP5.14□□□□□ -1.59
VPS50-212ENST00000476413 C2orf92A0A1B0GVN3 265 aa5.13□□□□□ -1.59
VPS50-212ENST00000476413 LMO7DNF2Z398 122 aa5.13□□□□□ -1.59
VPS50-212ENST00000476413 SLC1A7O00341 560 aa5.13□□□□□ -1.59
VPS50-212ENST00000476413 SYT7O43581 403 aa5.13□□□□□ -1.59
VPS50-212ENST00000476413 SEC22BO75396 215 aa5.13□□□□□ -1.59
VPS50-212ENST00000476413 ZFAND5O76080 213 aa5.13□□□□□ -1.59
VPS50-212ENST00000476413 MMP10P09238 476 aa5.13□□□□□ -1.59
VPS50-212ENST00000476413 CPA3P15088 417 aa5.13□□□□□ -1.59
VPS50-212ENST00000476413 CYP3A5P20815 502 aa5.13□□□□□ -1.59
VPS50-212ENST00000476413 AHCYP23526 432 aa5.13□□□□□ -1.59
VPS50-212ENST00000476413 CNTN1Q12860 1018 aa5.13□□□□□ -1.59
VPS50-212ENST00000476413 HNRNPDQ14103 355 aaKnown RBP5.13□□□□□ -1.59
VPS50-212ENST00000476413 TOM1L2Q6ZVM7 507 aa5.13□□□□□ -1.59
VPS50-212ENST00000476413 DND1Q8IYX4 353 aaKnown RBP5.13□□□□□ -1.59
VPS50-212ENST00000476413 FBXW8Q8N3Y1 598 aa5.13□□□□□ -1.59
VPS50-212ENST00000476413 CCDC185Q8N715 623 aa5.13□□□□□ -1.59
VPS50-212ENST00000476413 DDHD1Q8NEL9 900 aa5.13□□□□□ -1.59
VPS50-212ENST00000476413 TRPV3Q8NET8 790 aa5.13□□□□□ -1.59
VPS50-212ENST00000476413 SPATA18Q8TC71 538 aa5.13□□□□□ -1.59
VPS50-212ENST00000476413 SMPDL3AQ92484 453 aa5.13□□□□□ -1.59
VPS50-212ENST00000476413 SLCO4A1Q96BD0 722 aa5.13□□□□□ -1.59
VPS50-212ENST00000476413 OMA1Q96E52 524 aa5.13□□□□□ -1.59
VPS50-212ENST00000476413 GMPPAQ96IJ6 420 aaPredicted RBP5.13□□□□□ -1.59
VPS50-212ENST00000476413 CDHR1Q96JP9 859 aa5.13□□□□□ -1.59
VPS50-212ENST00000476413 PCDHB18PQ96TA0 734 aa5.13□□□□□ -1.59
VPS50-212ENST00000476413 IL12RB2Q99665 862 aa5.13□□□□□ -1.59
VPS50-212ENST00000476413 TNMDQ9H2S6 317 aa5.13□□□□□ -1.59
VPS50-212ENST00000476413 TMEM245Q9H330 911 aa5.13□□□□□ -1.59
VPS50-212ENST00000476413 DPEP3Q9H4B8 488 aa5.13□□□□□ -1.59
VPS50-212ENST00000476413 ZCCHC3Q9NUD5 404 aaKnown RBP5.13□□□□□ -1.59
VPS50-212ENST00000476413 ATAD3AQ9NVI7 634 aa5.13□□□□□ -1.59
VPS50-212ENST00000476413 TRIM10Q9UDY6 481 aa5.13□□□□□ -1.59
VPS50-212ENST00000476413 SELENOKQ9Y6D0 94 aa5.13□□□□□ -1.59
VPS50-212ENST00000476413 MEIOCA2RUB1 952 aa5.12□□□□□ -1.59
VPS50-212ENST00000476413 NKX6-3A6NJ46 265 aa5.12□□□□□ -1.59
VPS50-212ENST00000476413 SLC28A1O00337 649 aa5.12□□□□□ -1.59
VPS50-212ENST00000476413 TLX2O43763 284 aaPredicted RBP5.12□□□□□ -1.59
VPS50-212ENST00000476413 CLDN1O95832 211 aa5.12□□□□□ -1.59
VPS50-212ENST00000476413 PRKAR1AP10644 381 aa5.12□□□□□ -1.59
VPS50-212ENST00000476413 SKILP12757 684 aa5.12□□□□□ -1.59
VPS50-212ENST00000476413 MYOGP15173 224 aa5.12□□□□□ -1.59
VPS50-212ENST00000476413 EDNRAP25101 427 aa5.12□□□□□ -1.59
VPS50-212ENST00000476413 ACKR3P25106 362 aa5.12□□□□□ -1.59
VPS50-212ENST00000476413 CTNNA2P26232 953 aa5.12□□□□□ -1.59
VPS50-212ENST00000476413 OPRL1P41146 370 aa5.12□□□□□ -1.59
VPS50-212ENST00000476413 SLC1A3P43003 542 aa5.12□□□□□ -1.59
VPS50-212ENST00000476413 IL1RL1Q01638 556 aa5.12□□□□□ -1.59
VPS50-212ENST00000476413 SPHARQ15513 63 aa5.12□□□□□ -1.59
VPS50-212ENST00000476413 FIP1L1Q6UN15 594 aaKnown RBP5.12□□□□□ -1.59
VPS50-212ENST00000476413 MACC1Q6ZN28 852 aa5.12□□□□□ -1.59
VPS50-212ENST00000476413 CYP4V2Q6ZWL3 525 aaPredicted RBP5.12□□□□□ -1.59
VPS50-212ENST00000476413 SLC22A15Q8IZD6 547 aa5.12□□□□□ -1.59
VPS50-212ENST00000476413 NEK11Q8NG66 645 aa5.12□□□□□ -1.59
VPS50-212ENST00000476413 MAPK15Q8TD08 544 aa5.12□□□□□ -1.59
VPS50-212ENST00000476413 SLC13A3Q8WWT9 602 aa5.12□□□□□ -1.59
VPS50-212ENST00000476413 ARHGAP45Q92619 1136 aa5.12□□□□□ -1.59
VPS50-212ENST00000476413 RUFY1Q96T51 708 aa5.12□□□□□ -1.59
VPS50-212ENST00000476413 FAM213AQ9BRX8 229 aa5.12□□□□□ -1.59
VPS50-212ENST00000476413 ZNF577Q9BSK1 485 aa5.12□□□□□ -1.59
VPS50-212ENST00000476413 MTIF3Q9H2K0 278 aaKnown RBP5.12□□□□□ -1.59
VPS50-212ENST00000476413 ZNF665Q9H7R5 613 aa5.12□□□□□ -1.59
VPS50-212ENST00000476413 UBQLN2Q9UHD9 624 aa5.12□□□□□ -1.59
VPS50-212ENST00000476413 SH3GLB1Q9Y371 365 aa5.12□□□□□ -1.59
VPS50-212ENST00000476413 MYH15Q9Y2K3 1946 aa5.11□□□□□ -1.59
VPS50-212ENST00000476413 TRBV2A0A0J9YWF9 115 aa5.11□□□□□ -1.59
VPS50-212ENST00000476413 SYCE3A1L190 88 aa5.11□□□□□ -1.59
VPS50-212ENST00000476413 ANHXE9PGG2 379 aa5.11□□□□□ -1.59
VPS50-212ENST00000476413 CPNE6O95741 557 aa5.11□□□□□ -1.59
VPS50-212ENST00000476413 ALPPP05187 535 aa5.11□□□□□ -1.59
VPS50-212ENST00000476413 ALPPL2P10696 532 aa5.11□□□□□ -1.59
VPS50-212ENST00000476413 ZNF26P17031 533 aaPredicted RBP5.11□□□□□ -1.59
VPS50-212ENST00000476413 LUMP51884 338 aaPredicted RBP5.11□□□□□ -1.59
VPS50-212ENST00000476413 CNN1P51911 297 aaKnown RBP5.11□□□□□ -1.59
VPS50-212ENST00000476413 HUNKP57058 714 aa5.11□□□□□ -1.59
VPS50-212ENST00000476413 IRX4P78413 519 aa5.11□□□□□ -1.59
VPS50-212ENST00000476413 MFGE8Q08431 387 aaPredicted RBP5.11□□□□□ -1.59
VPS50-212ENST00000476413 GIT2Q14161 759 aa5.11□□□□□ -1.59
VPS50-212ENST00000476413 STX1AQ16623 288 aa5.11□□□□□ -1.59
VPS50-212ENST00000476413 PRAMEF7Q5VXH5 474 aa5.11□□□□□ -1.59
VPS50-212ENST00000476413 ZNF444Q8N0Y2 327 aaPredicted RBP5.11□□□□□ -1.59
VPS50-212ENST00000476413 SLC43A2Q8N370 569 aa5.11□□□□□ -1.59
VPS50-212ENST00000476413 RAB42Q8N4Z0 105 aa5.11□□□□□ -1.59
VPS50-212ENST00000476413 OR13C5Q8NGS8 318 aa5.11□□□□□ -1.59
VPS50-212ENST00000476413 OR6S1Q8NH40 331 aa5.11□□□□□ -1.59
VPS50-212ENST00000476413 OR4A16Q8NH70 328 aa5.11□□□□□ -1.59
VPS50-212ENST00000476413 EXOC6Q8TAG9 804 aa5.11□□□□□ -1.59
VPS50-212ENST00000476413 KIAA1524Q8TCG1 905 aa5.11□□□□□ -1.59
VPS50-212ENST00000476413 ZNF300Q96RE9 604 aaPredicted RBP5.11□□□□□ -1.59
VPS50-212ENST00000476413 NAP1L3Q99457 506 aaPredicted RBP5.11□□□□□ -1.59
VPS50-212ENST00000476413 SSX3Q99909 188 aa5.11□□□□□ -1.59
VPS50-212ENST00000476413 WDR13Q9H1Z4 485 aa5.11□□□□□ -1.59
VPS50-212ENST00000476413 SYTL2Q9HCH5 934 aa5.11□□□□□ -1.59
VPS50-212ENST00000476413 PIGVQ9NUD9 493 aa5.11□□□□□ -1.59
VPS50-212ENST00000476413 PLCXD1Q9NUJ7 323 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms