RNA–Protein interactions for RNA: ENST00000474190.1

CASC3-204, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-204ENST00000474190 KLF7O75840 302 aaPredicted RBP9.81□□□□□ -0.84
CASC3-204ENST00000474190 SEMA3DO95025 777 aa9.81□□□□□ -0.84
CASC3-204ENST00000474190 HSPA4LO95757 839 aa9.81□□□□□ -0.84
CASC3-204ENST00000474190 KRT6AP02538 564 aa9.81□□□□□ -0.84
CASC3-204ENST00000474190 KRT6BP04259 564 aa9.81□□□□□ -0.84
CASC3-204ENST00000474190 SERPIND1P05546 499 aa9.81□□□□□ -0.84
CASC3-204ENST00000474190 SLC35G6P0C7Q6 338 aa9.81□□□□□ -0.84
CASC3-204ENST00000474190 LINC00032P0C843 101 aa9.81□□□□□ -0.84
CASC3-204ENST00000474190 HSD3B1P14060 373 aa9.81□□□□□ -0.84
CASC3-204ENST00000474190 ATP5A1P25705 553 aaKnown RBP9.81□□□□□ -0.84
CASC3-204ENST00000474190 PTX3P26022 381 aaPredicted RBP9.81□□□□□ -0.84
CASC3-204ENST00000474190 HSD3B2P26439 372 aa9.81□□□□□ -0.84
CASC3-204ENST00000474190 CERS1P27544 350 aa9.81□□□□□ -0.84
CASC3-204ENST00000474190 KRT6CP48668 564 aa9.81□□□□□ -0.84
CASC3-204ENST00000474190 HNRNPFP52597 415 aaKnown RBP9.81□□□□□ -0.84
CASC3-204ENST00000474190 HK2P52789 917 aa9.81□□□□□ -0.84
CASC3-204ENST00000474190 PLA2G16P53816 162 aa9.81□□□□□ -0.84
CASC3-204ENST00000474190 CSTF3Q12996 717 aaKnown RBP9.81□□□□□ -0.84
CASC3-204ENST00000474190 IFT88Q13099 833 aa9.81□□□□□ -0.84
CASC3-204ENST00000474190 MAP7Q14244 749 aa9.81□□□□□ -0.84
CASC3-204ENST00000474190 HIST2H2ACQ16777 129 aaPredicted RBP9.81□□□□□ -0.84
CASC3-204ENST00000474190 PRSS53Q2L4Q9 553 aa9.81□□□□□ -0.84
CASC3-204ENST00000474190 MUM1Q2TAK8 710 aa9.81□□□□□ -0.84
CASC3-204ENST00000474190 TMEM35AQ53FP2 167 aa9.81□□□□□ -0.84
CASC3-204ENST00000474190 VWA5B1Q5TIE3 1220 aa9.81□□□□□ -0.84
CASC3-204ENST00000474190 YOD1Q5VVQ6 348 aaPredicted RBP9.81□□□□□ -0.84
CASC3-204ENST00000474190 ATG16L1Q676U5 607 aa9.81□□□□□ -0.84
CASC3-204ENST00000474190 HIST2H2AA3Q6FI13 130 aa9.81□□□□□ -0.84
CASC3-204ENST00000474190 GALNT18Q6P9A2 607 aa9.81□□□□□ -0.84
CASC3-204ENST00000474190 MED25Q71SY5 747 aa9.81□□□□□ -0.84
CASC3-204ENST00000474190 COMMD6Q7Z4G1 85 aa9.81□□□□□ -0.84
CASC3-204ENST00000474190 MMP21Q8N119 569 aa9.81□□□□□ -0.84
CASC3-204ENST00000474190 AMER2Q8N7J2 671 aa9.81□□□□□ -0.84
CASC3-204ENST00000474190 TMEM52Q8NDY8 209 aa9.81□□□□□ -0.84
CASC3-204ENST00000474190 NKD1Q969G9 470 aa9.81□□□□□ -0.84
CASC3-204ENST00000474190 REPS1Q96D71 796 aa9.81□□□□□ -0.84
CASC3-204ENST00000474190 C17orf62Q9BQA9 187 aa9.81□□□□□ -0.84
CASC3-204ENST00000474190 ILKAPQ9H0C8 392 aaPredicted RBP9.81□□□□□ -0.84
CASC3-204ENST00000474190 CHST8Q9H2A9 424 aa9.81□□□□□ -0.84
CASC3-204ENST00000474190 ELOVL6Q9H5J4 265 aa9.81□□□□□ -0.84
CASC3-204ENST00000474190 MEAF6Q9HAF1 191 aa9.81□□□□□ -0.84
CASC3-204ENST00000474190 FANCEQ9HB96 536 aa9.81□□□□□ -0.84
CASC3-204ENST00000474190 EML4Q9HC35 981 aaKnown RBP9.81□□□□□ -0.84
CASC3-204ENST00000474190 LANCL2Q9NS86 450 aa9.81□□□□□ -0.84
CASC3-204ENST00000474190 CTSFQ9UBX1 484 aa9.81□□□□□ -0.84
CASC3-204ENST00000474190 MARCOQ9UEW3 520 aaPredicted RBP9.81□□□□□ -0.84
CASC3-204ENST00000474190 NAALAD2Q9Y3Q0 740 aa9.81□□□□□ -0.84
CASC3-204ENST00000474190 ASB4Q9Y574 426 aa9.81□□□□□ -0.84
CASC3-204ENST00000474190 MAU2Q9Y6X3 613 aa9.81□□□□□ -0.84
CASC3-204ENST00000474190 PCM1Q15154 2024 aa9.81□□□□□ -0.84
CASC3-204ENST00000474190 SDK2Q58EX2 2172 aa9.81□□□□□ -0.84
CASC3-204ENST00000474190 OR2W5A6NFC9 320 aa9.8□□□□□ -0.84
CASC3-204ENST00000474190 WASHC1A8K0Z3 465 aa9.8□□□□□ -0.84
CASC3-204ENST00000474190 TGFBR3LH3BV60 316 aa9.8□□□□□ -0.84
CASC3-204ENST00000474190 TXNDC9O14530 226 aa9.8□□□□□ -0.84
CASC3-204ENST00000474190 RDH16O75452 317 aa9.8□□□□□ -0.84
CASC3-204ENST00000474190 SKAP2O75563 359 aaPredicted RBP9.8□□□□□ -0.84
CASC3-204ENST00000474190 JRKO75564 520 aa9.8□□□□□ -0.84
CASC3-204ENST00000474190 RSL1D1O76021 490 aaKnown RBP9.8□□□□□ -0.84
CASC3-204ENST00000474190 SNUPNO95149 360 aaKnown RBP9.8□□□□□ -0.84
CASC3-204ENST00000474190 RECKO95980 971 aa9.8□□□□□ -0.84
CASC3-204ENST00000474190 GBAP04062 536 aa9.8□□□□□ -0.84
CASC3-204ENST00000474190 HIST1H1TP22492 207 aaPredicted RBP9.8□□□□□ -0.84
CASC3-204ENST00000474190 TACR1P25103 407 aa9.8□□□□□ -0.84
CASC3-204ENST00000474190 HMOX2P30519 316 aa9.8□□□□□ -0.84
CASC3-204ENST00000474190 STAT5AP42229 794 aa9.8□□□□□ -0.84
CASC3-204ENST00000474190 ARFIP1P53367 373 aa9.8□□□□□ -0.84
CASC3-204ENST00000474190 ARSFP54793 590 aa9.8□□□□□ -0.84
CASC3-204ENST00000474190 HNRNPH2P55795 449 aaKnown RBP9.8□□□□□ -0.84
CASC3-204ENST00000474190 OLR1P78380 273 aa9.8□□□□□ -0.84
CASC3-204ENST00000474190 BTN3A2P78410 334 aa9.8□□□□□ -0.84
CASC3-204ENST00000474190 RGS1Q08116 209 aa9.8□□□□□ -0.84
CASC3-204ENST00000474190 CLN3Q13286 438 aa9.8□□□□□ -0.84
CASC3-204ENST00000474190 DSG2Q14126 1118 aa9.8□□□□□ -0.84
CASC3-204ENST00000474190 HERC3Q15034 1050 aa9.8□□□□□ -0.84
CASC3-204ENST00000474190 FAM214AQ32MH5 1076 aa9.8□□□□□ -0.84
CASC3-204ENST00000474190 NKAIN1Q4KMZ8 207 aa9.8□□□□□ -0.84
CASC3-204ENST00000474190 SLC9B1Q4ZJI4 515 aa9.8□□□□□ -0.84
CASC3-204ENST00000474190 RFTN2Q52LD8 501 aaPredicted RBP9.8□□□□□ -0.84
CASC3-204ENST00000474190 OR4C11Q6IEV9 310 aa9.8□□□□□ -0.84
CASC3-204ENST00000474190 C6orf15Q6UXA7 325 aaPredicted RBP9.8□□□□□ -0.84
CASC3-204ENST00000474190 FAM47EQ6ZV65 393 aa9.8□□□□□ -0.84
CASC3-204ENST00000474190 LARP4Q71RC2 724 aaKnown RBP eCLIP9.8□□□□□ -0.841e-6■■■□□ 19.2
CASC3-204ENST00000474190 CLNKQ7Z7G1 428 aa9.8□□□□□ -0.84
CASC3-204ENST00000474190 ZC3H7AQ8IWR0 971 aaKnown RBP9.8□□□□□ -0.84
CASC3-204ENST00000474190 TRIM42Q8IWZ5 723 aa9.8□□□□□ -0.84
CASC3-204ENST00000474190 GPR135Q8IZ08 494 aa9.8□□□□□ -0.84
CASC3-204ENST00000474190 CA13Q8N1Q1 262 aa9.8□□□□□ -0.84
CASC3-204ENST00000474190 ZCCHC7Q8N3Z6 543 aaKnown RBP9.8□□□□□ -0.84
CASC3-204ENST00000474190 C1orf52Q8N6N3 182 aaKnown RBP9.8□□□□□ -0.84
CASC3-204ENST00000474190 GBP7Q8N8V2 638 aaPredicted RBP9.8□□□□□ -0.84
CASC3-204ENST00000474190 ACOT4Q8N9L9 421 aa9.8□□□□□ -0.84
CASC3-204ENST00000474190 SNIP1Q8TAD8 396 aaKnown RBP9.8□□□□□ -0.84
CASC3-204ENST00000474190 PPP1R14CQ8TAE6 165 aa9.8□□□□□ -0.84
CASC3-204ENST00000474190 PROKR1Q8TCW9 393 aa9.8□□□□□ -0.84
CASC3-204ENST00000474190 LRRC8CQ8TDW0 803 aa9.8□□□□□ -0.84
CASC3-204ENST00000474190 CT55Q8WUE5 264 aa9.8□□□□□ -0.84
CASC3-204ENST00000474190 NUDT8Q8WV74 236 aa9.8□□□□□ -0.84
CASC3-204ENST00000474190 NXPE2Q96DL1 559 aa9.8□□□□□ -0.84
CASC3-204ENST00000474190 C19orf60Q96EN9 201 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms