RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 RBMS3Q6XE24 437 aaKnown RBP3.8□□□□□ -1.8
BRCA1-212ENST00000473961 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.8□□□□□ -1.8
BRCA1-212ENST00000473961 FAM43BQ6ZT52 329 aaPredicted RBP3.8□□□□□ -1.8
BRCA1-212ENST00000473961 RFPL4BQ6ZWI9 263 aa3.8□□□□□ -1.8
BRCA1-212ENST00000473961 CYP4V2Q6ZWL3 525 aaPredicted RBP3.8□□□□□ -1.8
BRCA1-212ENST00000473961 RBM23Q86U06 439 aaKnown RBP3.8□□□□□ -1.8
BRCA1-212ENST00000473961 STHQ8IWL8 128 aa3.8□□□□□ -1.8
BRCA1-212ENST00000473961 LMNTD2Q8IXW0 634 aa3.8□□□□□ -1.8
BRCA1-212ENST00000473961 TDHQ8IZJ6 230 aa3.8□□□□□ -1.8
BRCA1-212ENST00000473961 CNBD1Q8NA66 436 aa3.8□□□□□ -1.8
BRCA1-212ENST00000473961 OR4D10Q8NGI6 311 aa3.8□□□□□ -1.8
BRCA1-212ENST00000473961 OR13C5Q8NGS8 318 aa3.8□□□□□ -1.8
BRCA1-212ENST00000473961 OR4A16Q8NH70 328 aa3.8□□□□□ -1.8
BRCA1-212ENST00000473961 PCDHB18PQ96TA0 734 aa3.8□□□□□ -1.8
BRCA1-212ENST00000473961 CCDC94Q9BW85 323 aaPredicted RBP3.8□□□□□ -1.8
BRCA1-212ENST00000473961 FTHL17Q9BXU8 183 aa3.8□□□□□ -1.8
BRCA1-212ENST00000473961 GANQ9H2C0 597 aa3.8□□□□□ -1.8
BRCA1-212ENST00000473961 C5orf66Q9H5L9 145 aa3.8□□□□□ -1.8
BRCA1-212ENST00000473961 KCNMB3Q9NPA1 279 aa3.8□□□□□ -1.8
BRCA1-212ENST00000473961 HACD3Q9P035 362 aa3.8□□□□□ -1.8
BRCA1-212ENST00000473961 NARFQ9UHQ1 456 aa3.8□□□□□ -1.8
BRCA1-212ENST00000473961 SH3BGRL2Q9UJC5 107 aa3.8□□□□□ -1.8
BRCA1-212ENST00000473961 CLCA3PQ9Y6N3 262 aa3.8□□□□□ -1.8
BRCA1-212ENST00000473961 KIF21BO75037 1637 aa3.8□□□□□ -1.8
BRCA1-212ENST00000473961 EIF4G1Q04637 1599 aaKnown RBP3.8□□□□□ -1.8
BRCA1-212ENST00000473961 AKNAQ7Z591 1439 aa3.79□□□□□ -1.8
BRCA1-212ENST00000473961 SETD5Q9C0A6 1442 aa3.79□□□□□ -1.8
BRCA1-212ENST00000473961 CCNB3Q8WWL7 1395 aa3.79□□□□□ -1.8
BRCA1-212ENST00000473961 A0A087WUV0 522 aaPredicted RBP3.79□□□□□ -1.8
BRCA1-212ENST00000473961 IQCMA0A1B0GVH7 501 aa3.79□□□□□ -1.8
BRCA1-212ENST00000473961 CCL24O00175 119 aa3.79□□□□□ -1.8
BRCA1-212ENST00000473961 PCDH7O60245 1069 aa3.79□□□□□ -1.8
BRCA1-212ENST00000473961 NME2P1O60361 137 aa3.79□□□□□ -1.8
BRCA1-212ENST00000473961 CXCL14O95715 111 aa3.79□□□□□ -1.8
BRCA1-212ENST00000473961 GUCA1CO95843 209 aa3.79□□□□□ -1.8
BRCA1-212ENST00000473961 MT-ND2P03891 347 aa3.79□□□□□ -1.8
BRCA1-212ENST00000473961 HEXBP07686 556 aa3.79□□□□□ -1.8
BRCA1-212ENST00000473961 APRTP07741 180 aa3.79□□□□□ -1.8
BRCA1-212ENST00000473961 CT45A8P0DMV1 189 aa3.79□□□□□ -1.8
BRCA1-212ENST00000473961 CT45A9P0DMV2 189 aa3.79□□□□□ -1.8
BRCA1-212ENST00000473961 RPL35AP18077 110 aaKnown RBP3.79□□□□□ -1.8
BRCA1-212ENST00000473961 DUTP33316 252 aaKnown RBP3.79□□□□□ -1.8
BRCA1-212ENST00000473961 DCTP40126 519 aa3.79□□□□□ -1.8
BRCA1-212ENST00000473961 SLC6A12P48065 614 aa3.79□□□□□ -1.8
BRCA1-212ENST00000473961 TNFSF10P50591 281 aa3.79□□□□□ -1.8
BRCA1-212ENST00000473961 GEMP55040 296 aa3.79□□□□□ -1.8
BRCA1-212ENST00000473961 RIPK4P57078 832 aa3.79□□□□□ -1.8
BRCA1-212ENST00000473961 SRSF9Q13242 221 aaKnown RBP eCLIP3.79□□□□□ -1.8
BRCA1-212ENST00000473961 DPYSQ14117 519 aa3.79□□□□□ -1.8
BRCA1-212ENST00000473961 ZNF74Q16587 644 aa3.79□□□□□ -1.8
BRCA1-212ENST00000473961 KIAA1644Q3SXP7 199 aa3.79□□□□□ -1.8
BRCA1-212ENST00000473961 GTDC1Q4AE62 458 aa3.79□□□□□ -1.8
BRCA1-212ENST00000473961 CT45A2Q5DJT8 189 aa3.79□□□□□ -1.8
BRCA1-212ENST00000473961 SLC25A53Q5H9E4 307 aa3.79□□□□□ -1.8
BRCA1-212ENST00000473961 DDI2Q5TDH0 399 aa3.79□□□□□ -1.8
BRCA1-212ENST00000473961 RAET1GQ6H3X3 334 aa3.79□□□□□ -1.8
BRCA1-212ENST00000473961 OR6B2Q6IFH4 312 aa3.79□□□□□ -1.8
BRCA1-212ENST00000473961 IRGCQ6NXR0 463 aa3.79□□□□□ -1.8
BRCA1-212ENST00000473961 C19orf48Q6RUI8 117 aa3.79□□□□□ -1.8
BRCA1-212ENST00000473961 SH2D5Q6ZV89 423 aa3.79□□□□□ -1.8
BRCA1-212ENST00000473961 TRMT11Q7Z4G4 463 aaKnown RBP3.79□□□□□ -1.8
BRCA1-212ENST00000473961 ADAMTSL2Q86TH1 951 aa3.79□□□□□ -1.8
BRCA1-212ENST00000473961 TRPT1Q86TN4 253 aaKnown RBP3.79□□□□□ -1.8
BRCA1-212ENST00000473961 ZDHHC17Q8IUH5 632 aa3.79□□□□□ -1.8
BRCA1-212ENST00000473961 KBTBD3Q8NAB2 608 aa3.79□□□□□ -1.8
BRCA1-212ENST00000473961 TRPV3Q8NET8 790 aa3.79□□□□□ -1.8
BRCA1-212ENST00000473961 KBTBD8Q8NFY9 601 aa3.79□□□□□ -1.8
BRCA1-212ENST00000473961 OR5T2Q8NGG2 359 aa3.79□□□□□ -1.8
BRCA1-212ENST00000473961 OR52E1Q8NGJ3 308 aa3.79□□□□□ -1.8
BRCA1-212ENST00000473961 ZNRF4Q8WWF5 429 aa3.79□□□□□ -1.8
BRCA1-212ENST00000473961 HPSE2Q8WWQ2 592 aa3.79□□□□□ -1.8
BRCA1-212ENST00000473961 FCAMRQ8WWV6 532 aa3.79□□□□□ -1.8
BRCA1-212ENST00000473961 SAMD8Q96LT4 415 aa3.79□□□□□ -1.8
BRCA1-212ENST00000473961 SPATA13Q96N96 652 aa3.79□□□□□ -1.8
BRCA1-212ENST00000473961 CCM2Q9BSQ5 444 aa3.79□□□□□ -1.8
BRCA1-212ENST00000473961 TDRD1Q9BXT4 1180 aaKnown RBP3.79□□□□□ -1.8
BRCA1-212ENST00000473961 SHARPINQ9H0F6 387 aa3.79□□□□□ -1.8
BRCA1-212ENST00000473961 DPH5Q9H2P9 285 aa3.79□□□□□ -1.8
BRCA1-212ENST00000473961 DCLRE1BQ9H816 532 aa3.79□□□□□ -1.8
BRCA1-212ENST00000473961 PLEK2Q9NYT0 353 aa3.79□□□□□ -1.8
BRCA1-212ENST00000473961 TMCC3Q9ULS5 477 aa3.79□□□□□ -1.8
BRCA1-212ENST00000473961 PLA2G4CQ9UP65 541 aa3.79□□□□□ -1.8
BRCA1-212ENST00000473961 PLEKHA6Q9Y2H5 1048 aa3.79□□□□□ -1.8
BRCA1-212ENST00000473961 ETV7Q9Y603 341 aa3.79□□□□□ -1.8
BRCA1-212ENST00000473961 NCOA2Q15596 1464 aa3.79□□□□□ -1.8
BRCA1-212ENST00000473961 CNTLNQ9NXG0 1405 aa3.78□□□□□ -1.8
BRCA1-212ENST00000473961 RAB3GAP2Q9H2M9 1393 aa3.78□□□□□ -1.8
BRCA1-212ENST00000473961 UBE4BO95155 1302 aa3.78□□□□□ -1.8
BRCA1-212ENST00000473961 ABCC8Q09428 1581 aa3.78□□□□□ -1.8
BRCA1-212ENST00000473961 SNURFLB1AK76 121 aa3.78□□□□□ -1.8
BRCA1-212ENST00000473961 SLCO1B7G3V0H7 640 aa3.78□□□□□ -1.8
BRCA1-212ENST00000473961 FAM72CH0Y354 149 aa3.78□□□□□ -1.8
BRCA1-212ENST00000473961 FPGTO14772 594 aa3.78□□□□□ -1.8
BRCA1-212ENST00000473961 OR6B1O95007 311 aa3.78□□□□□ -1.8
BRCA1-212ENST00000473961 EML2O95834 649 aa3.78□□□□□ -1.8
BRCA1-212ENST00000473961 PAK4O96013 591 aaPredicted RBP3.78□□□□□ -1.8
BRCA1-212ENST00000473961 TGFAP01135 160 aa3.78□□□□□ -1.8
BRCA1-212ENST00000473961 VTNP04004 478 aa3.78□□□□□ -1.8
BRCA1-212ENST00000473961 CHRNGP07510 517 aa3.78□□□□□ -1.8
BRCA1-212ENST00000473961 FRMD6-AS1P0C7T7 363 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms