RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 FOXE1O00358 373 aaPredicted RBP11.74□□□□□ -0.53
DDX56-209ENST00000473924 CHST10O43529 356 aa11.74□□□□□ -0.53
DDX56-209ENST00000473924 ESRRBO95718 433 aa11.74□□□□□ -0.53
DDX56-209ENST00000473924 TBX6O95947 436 aaPredicted RBP11.74□□□□□ -0.53
DDX56-209ENST00000473924 KRT6AP02538 564 aa11.74□□□□□ -0.53
DDX56-209ENST00000473924 KRT6BP04259 564 aa11.74□□□□□ -0.53
DDX56-209ENST00000473924 ENO1P06733 434 aaKnown RBP11.74□□□□□ -0.53
DDX56-209ENST00000473924 HEXBP07686 556 aa11.74□□□□□ -0.53
DDX56-209ENST00000473924 UMODP07911 640 aa11.74□□□□□ -0.53
DDX56-209ENST00000473924 FURINP09958 794 aa11.74□□□□□ -0.53
DDX56-209ENST00000473924 NEFHP12036 1026 aa11.74□□□□□ -0.53
DDX56-209ENST00000473924 SSR2P43308 183 aa11.74□□□□□ -0.53
DDX56-209ENST00000473924 KRT6CP48668 564 aa11.74□□□□□ -0.53
DDX56-209ENST00000473924 MTTPP55157 894 aa11.74□□□□□ -0.53
DDX56-209ENST00000473924 AP5B1Q2VPB7 878 aa11.74□□□□□ -0.53
DDX56-209ENST00000473924 DEFB109BQ30KR1 87 aa11.74□□□□□ -0.53
DDX56-209ENST00000473924 MINDY4Q4G0A6 757 aa11.74□□□□□ -0.53
DDX56-209ENST00000473924 DEPDC1Q5TB30 811 aa11.74□□□□□ -0.53
DDX56-209ENST00000473924 ABHD17CQ6PCB6 329 aa11.74□□□□□ -0.53
DDX56-209ENST00000473924 NUDCD3Q8IVD9 361 aa11.74□□□□□ -0.53
DDX56-209ENST00000473924 ZC3H7AQ8IWR0 971 aaKnown RBP11.74□□□□□ -0.53
DDX56-209ENST00000473924 ANKRD42Q8N9B4 389 aa11.74□□□□□ -0.53
DDX56-209ENST00000473924 AGAP11Q8TF27 550 aa11.74□□□□□ -0.53
DDX56-209ENST00000473924 THAP4Q8WY91 577 aa11.74□□□□□ -0.53
DDX56-209ENST00000473924 RGMAQ96B86 450 aa11.74□□□□□ -0.53
DDX56-209ENST00000473924 CNDP1Q96KN2 507 aa11.74□□□□□ -0.53
DDX56-209ENST00000473924 IP6K3Q96PC2 410 aa11.74□□□□□ -0.53
DDX56-209ENST00000473924 SERINC2Q96SA4 455 aa11.74□□□□□ -0.53
DDX56-209ENST00000473924 SERPINI1Q99574 410 aa11.74□□□□□ -0.53
DDX56-209ENST00000473924 PAIP2Q9BPZ3 127 aaKnown RBP11.74□□□□□ -0.53
DDX56-209ENST00000473924 TBCDQ9BTW9 1192 aa11.74□□□□□ -0.53
DDX56-209ENST00000473924 GATA5Q9BWX5 397 aaPredicted RBP11.74□□□□□ -0.53
DDX56-209ENST00000473924 RBCK1Q9BYM8 510 aa11.74□□□□□ -0.53
DDX56-209ENST00000473924 SLC29A3Q9BZD2 475 aa11.74□□□□□ -0.53
DDX56-209ENST00000473924 TGIF2Q9GZN2 237 aa11.74□□□□□ -0.53
DDX56-209ENST00000473924 VIPAS39Q9H9C1 493 aa11.74□□□□□ -0.53
DDX56-209ENST00000473924 CLK4Q9HAZ1 481 aaKnown RBP11.74□□□□□ -0.53
DDX56-209ENST00000473924 SEMA3GQ9NS98 782 aa11.74□□□□□ -0.53
DDX56-209ENST00000473924 C3orf18Q9UK00 162 aa11.74□□□□□ -0.53
DDX56-209ENST00000473924 ZNF225Q9UK10 706 aa11.74□□□□□ -0.53
DDX56-209ENST00000473924 MKL2Q9ULH7 1088 aa11.74□□□□□ -0.53
DDX56-209ENST00000473924 LHX6Q9UPM6 363 aa11.74□□□□□ -0.53
DDX56-209ENST00000473924 MAN2B2Q9Y2E5 1009 aa11.74□□□□□ -0.53
DDX56-209ENST00000473924 UQCRHLA0A096LP55 91 aa11.73□□□□□ -0.53
DDX56-209ENST00000473924 WDR91A4D1P6 747 aa11.73□□□□□ -0.53
DDX56-209ENST00000473924 IDSB3KWA1 339 aa11.73□□□□□ -0.53
DDX56-209ENST00000473924 AGPSO00116 658 aa11.73□□□□□ -0.53
DDX56-209ENST00000473924 RTCAO00442 366 aaKnown RBP11.73□□□□□ -0.53
DDX56-209ENST00000473924 PEX12O00623 359 aa11.73□□□□□ -0.53
DDX56-209ENST00000473924 UBFD1O14562 309 aaKnown RBP11.73□□□□□ -0.53
DDX56-209ENST00000473924 ULK1O75385 1050 aa11.73□□□□□ -0.53
DDX56-209ENST00000473924 JRKO75564 520 aa11.73□□□□□ -0.53
DDX56-209ENST00000473924 BMP10O95393 424 aa11.73□□□□□ -0.53
DDX56-209ENST00000473924 PDYNP01213 254 aa11.73□□□□□ -0.53
DDX56-209ENST00000473924 IGHEP01854 428 aa11.73□□□□□ -0.53
DDX56-209ENST00000473924 BPGMP07738 259 aa11.73□□□□□ -0.53
DDX56-209ENST00000473924 UQCRHP07919 91 aa11.73□□□□□ -0.53
DDX56-209ENST00000473924 RNH1P13489 461 aaKnown RBP11.73□□□□□ -0.53
DDX56-209ENST00000473924 IL10P22301 178 aa11.73□□□□□ -0.53
DDX56-209ENST00000473924 JAK1P23458 1154 aa11.73□□□□□ -0.53
DDX56-209ENST00000473924 CERS1P27544 350 aa11.73□□□□□ -0.53
DDX56-209ENST00000473924 ETV4P43268 484 aa11.73□□□□□ -0.53
DDX56-209ENST00000473924 CCR10P46092 362 aa11.73□□□□□ -0.53
DDX56-209ENST00000473924 SERPINB4P48594 390 aa11.73□□□□□ -0.53
DDX56-209ENST00000473924 EMP2P54851 167 aa11.73□□□□□ -0.53
DDX56-209ENST00000473924 CUL3Q13618 768 aa11.73□□□□□ -0.53
DDX56-209ENST00000473924 AGBL2Q5U5Z8 902 aa11.73□□□□□ -0.53
DDX56-209ENST00000473924 OR4C11Q6IEV9 310 aa11.73□□□□□ -0.53
DDX56-209ENST00000473924 ZCCHC23Q6ZST2 131 aa11.73□□□□□ -0.53
DDX56-209ENST00000473924 PKD1L2Q7Z442 2459 aa11.73□□□□□ -0.53
DDX56-209ENST00000473924 ZFHX4Q86UP3 3567 aa11.73□□□□□ -0.53
DDX56-209ENST00000473924 LAPTM4BQ86VI4 370 aa11.73□□□□□ -0.53
DDX56-209ENST00000473924 ADAMTS17Q8TE56 1095 aa11.73□□□□□ -0.53
DDX56-209ENST00000473924 TBC1D20Q96BZ9 403 aa11.73□□□□□ -0.53
DDX56-209ENST00000473924 TLCD1Q96CP7 247 aa11.73□□□□□ -0.53
DDX56-209ENST00000473924 VPS50Q96JG6 964 aa11.73□□□□□ -0.53
DDX56-209ENST00000473924 QRFPRQ96P65 431 aa11.73□□□□□ -0.53
DDX56-209ENST00000473924 OR1F2PQ96R84 312 aa11.73□□□□□ -0.53
DDX56-209ENST00000473924 KCNA7Q96RP8 456 aa11.73□□□□□ -0.53
DDX56-209ENST00000473924 ARHGAP9Q9BRR9 750 aa11.73□□□□□ -0.53
DDX56-209ENST00000473924 TRMOQ9BU70 441 aa11.73□□□□□ -0.53
DDX56-209ENST00000473924 NPLQ9BXD5 320 aaPredicted RBP11.73□□□□□ -0.53
DDX56-209ENST00000473924 SHCBP1LQ9BZQ2 653 aa11.73□□□□□ -0.53
DDX56-209ENST00000473924 EPG5Q9HCE0 2579 aa11.73□□□□□ -0.53
DDX56-209ENST00000473924 FARSBQ9NSD9 589 aaKnown RBP11.73□□□□□ -0.53
DDX56-209ENST00000473924 NMRK1Q9NWW6 199 aa11.73□□□□□ -0.53
DDX56-209ENST00000473924 PSD3Q9NYI0 1048 aa11.73□□□□□ -0.53
DDX56-209ENST00000473924 PTPRQQ9UMZ3 2332 aa11.72□□□□□ -0.53
DDX56-209ENST00000473924 CCDC88CQ9P219 2028 aa11.72□□□□□ -0.53
DDX56-209ENST00000473924 TMEM120BA0PK00 339 aa11.72□□□□□ -0.53
DDX56-209ENST00000473924 MANBAO00462 879 aa11.72□□□□□ -0.53
DDX56-209ENST00000473924 PLPP1O14494 284 aa11.72□□□□□ -0.53
DDX56-209ENST00000473924 NPHS1O60500 1241 aa11.72□□□□□ -0.53
DDX56-209ENST00000473924 B4GALT2O60909 372 aa11.72□□□□□ -0.53
DDX56-209ENST00000473924 DNAJB6O75190 326 aa11.72□□□□□ -0.53
DDX56-209ENST00000473924 CDC123O75794 336 aaPredicted RBP11.72□□□□□ -0.53
DDX56-209ENST00000473924 ITGB2P05107 769 aa11.72□□□□□ -0.53
DDX56-209ENST00000473924 FHP07954 510 aa11.72□□□□□ -0.53
DDX56-209ENST00000473924 HIST1H1TP22492 207 aaPredicted RBP11.72□□□□□ -0.53
DDX56-209ENST00000473924 MMP11P24347 488 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms