RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 KCNC4Q03721 635 aa12.82□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 NUSAP1Q9BXS6 441 aaKnown RBP12.82□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 OR51B5Q9H339 312 aa12.82□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 MAGEE1Q9HCI5 957 aa12.82□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 ICKQ9UPZ9 632 aa12.82□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 E9PCH4 1651 aa12.82□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 TTLL8A6PVC2 850 aa12.82□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 L1CAMP32004 1257 aa12.82□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 DLSTP36957 453 aa12.82□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 ZNF423Q2M1K9 1284 aa12.82□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 RCBTB1Q8NDN9 531 aa12.82□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 TM9SF3Q9HD45 589 aa12.82□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.82□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 FAM237AA0A1B0GTK4 181 aa12.82□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 FAM221BA6H8Z2 402 aa12.82□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 OR6C70A6NIJ9 312 aa12.82□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 ZNF670-ZNF695F2Z2N8 137 aa12.82□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 H0Y8G0 127 aa12.82□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 IFNA4P05014 189 aa12.82□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 ATP1B2P14415 290 aaPredicted RBP12.82□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 E2F1Q01094 437 aa12.82□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 FLYWCH1Q4VC44 716 aa12.82□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 OR4F3Q6IEY1 312 aa12.82□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 ESPNLQ6ZVH7 1005 aa12.82□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 CCDC116Q8IYX3 515 aa12.82□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 BPIFB1Q8TDL5 484 aa12.82□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 LRRC58Q96CX6 371 aa12.82□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 PTCHD1Q96NR3 888 aa12.82□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 SAGE2PA6NJ88 616 aa12.81□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 CD36P16671 472 aa12.81□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 FKBP1AP62942 108 aaKnown RBP12.81□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 MRPL41Q8IXM3 137 aaKnown RBP12.81□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 PGAM4Q8N0Y7 254 aa12.81□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 ZNF514Q96K75 400 aaPredicted RBP12.81□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 WACQ9BTA9 647 aa12.81□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 NWD1Q149M9 1564 aa12.81□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 TRAV6A0A075B6T7 132 aa12.81□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 H7C1Q1 480 aa12.81□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 TGFB1I1O43294 461 aa12.81□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 RAB36O95755 333 aa12.81□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 CHRNA1P02708 482 aa12.81□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 RBMS1P29558 406 aaKnown RBP12.81□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 KCNQ1P51787 676 aa12.81□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 DYRK1AQ13627 763 aa12.81□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 MFSD13AQ14CX5 517 aa12.81□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 KCTD7Q96MP8 289 aa12.81□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 MYEF2Q9P2K5 600 aaKnown RBP12.81□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 NCANO14594 1321 aa12.81□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 HAS3O00219 553 aa12.81□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 NR2C1P13056 603 aa12.81□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 TAS2R39P59534 338 aa12.81□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 RPS13P62277 151 aaKnown RBP12.81□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 RNF220Q5VTB9 566 aa12.81□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 OR6N2Q8NGY6 317 aa12.81□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 TLX2O43763 284 aaPredicted RBP12.81□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 TPSB2P20231 275 aa12.81□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 GGT2P36268 569 aa12.81□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 GSTM4Q03013 218 aa12.81□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 TPSAB1Q15661 275 aa12.81□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 LRFN4Q6PJG9 635 aa12.81□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 SLC25A44Q96H78 314 aaPredicted RBP12.81□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 COQ10BQ9H8M1 238 aa12.81□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 NUFIP1Q9UHK0 495 aaKnown RBP12.81□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 EDDM13A0A1B0GTR0 161 aa12.81□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 PDLIM1O00151 329 aa12.81□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 SLC16A5O15375 505 aa12.81□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 FGF18O76093 207 aa12.81□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 IDH3AP50213 366 aa12.81□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 PSPHP78330 225 aa12.81□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 EIF2B1Q14232 305 aaKnown RBP12.81□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 WDR45BQ5MNZ6 344 aa12.81□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 FZD10Q9ULW2 581 aa12.81□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 PADI2Q9Y2J8 665 aa12.81□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 PCDHGB2Q9Y5G2 931 aa12.81□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 ABCA1O95477 2261 aa12.81□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 HTR1AP08908 422 aa12.81□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 RAC2P15153 192 aa12.81□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 LIMK2P53671 638 aa12.81□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 PNLIPRP1P54315 467 aa12.81□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 WSCD2Q2TBF2 565 aa12.81□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 ADGRF1Q5T601 910 aa12.81□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 MFSD8Q8NHS3 518 aa12.81□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 SHKBP1Q8TBC3 707 aa12.81□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 SGCZQ96LD1 299 aa12.81□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 USP29Q9HBJ7 922 aa12.81□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 ASB6Q9NWX5 421 aa12.81□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 SOX30O94993 753 aa12.8□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 H1F0P07305 194 aaKnown RBP12.8□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 ROR2Q01974 943 aaKnown RBP12.8□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 PON3Q15166 354 aa12.8□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 TIGD4Q8IY51 512 aa12.8□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 PSD4Q8NDX1 1056 aa12.8□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 SNX27Q96L92 541 aa12.8□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 DCBLD2Q96PD2 775 aa12.8□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 CCM2Q9BSQ5 444 aa12.8□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 FGFBP2Q9BYJ0 223 aa12.8□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 ZDHHC3Q9NYG2 299 aa12.8□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 MGAT4CQ9UBM8 478 aa12.8□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 FER1L6Q2WGJ9 1857 aa12.8□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 ABLIM1O14639 778 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms