RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 CCDC51Q96ER9 411 aa5.97□□□□□ -1.45
SMC5-202ENST00000471372 TUBA1CQ9BQE3 449 aa5.97□□□□□ -1.45
SMC5-202ENST00000471372 NUSAP1Q9BXS6 441 aaKnown RBP5.97□□□□□ -1.45
SMC5-202ENST00000471372 RIBC2Q9H4K1 309 aa5.97□□□□□ -1.45
SMC5-202ENST00000471372 YAE1D1Q9NRH1 226 aa5.97□□□□□ -1.45
SMC5-202ENST00000471372 FAF1Q9UNN5 650 aaPredicted RBP5.97□□□□□ -1.45
SMC5-202ENST00000471372 MRPS2Q9Y399 296 aaKnown RBP5.97□□□□□ -1.45
SMC5-202ENST00000471372 ATG4BQ9Y4P1 393 aa5.97□□□□□ -1.45
SMC5-202ENST00000471372 ZNF521Q96K83 1311 aa5.97□□□□□ -1.45
SMC5-202ENST00000471372 ATP6AP2A0A1C7CYW4 349 aa5.96□□□□□ -1.46
SMC5-202ENST00000471372 DNAJC9-AS1A6NH13 148 aa5.96□□□□□ -1.46
SMC5-202ENST00000471372 SRRM4A7MD48 611 aaKnown RBP5.96□□□□□ -1.46
SMC5-202ENST00000471372 TULP2O00295 520 aa5.96□□□□□ -1.46
SMC5-202ENST00000471372 PCCBP05166 539 aa5.96□□□□□ -1.46
SMC5-202ENST00000471372 FRMD6-AS1P0C7T7 363 aa5.96□□□□□ -1.46
SMC5-202ENST00000471372 ANPEPP15144 967 aa5.96□□□□□ -1.46
SMC5-202ENST00000471372 GNSP15586 552 aa5.96□□□□□ -1.46
SMC5-202ENST00000471372 HLA-FP30511 346 aa5.96□□□□□ -1.46
SMC5-202ENST00000471372 LBX1P52954 281 aa5.96□□□□□ -1.46
SMC5-202ENST00000471372 HMGN5P82970 282 aaKnown RBP5.96□□□□□ -1.46
SMC5-202ENST00000471372 GPR50Q13585 617 aa5.96□□□□□ -1.46
SMC5-202ENST00000471372 ITGA9Q13797 1035 aa5.96□□□□□ -1.46
SMC5-202ENST00000471372 CASC1Q6TDU7 716 aa5.96□□□□□ -1.46
SMC5-202ENST00000471372 CEACAM20Q6UY09 585 aa5.96□□□□□ -1.46
SMC5-202ENST00000471372 SLC24A5Q71RS6 500 aa5.96□□□□□ -1.46
SMC5-202ENST00000471372 TRMT1LQ7Z2T5 733 aaKnown RBP5.96□□□□□ -1.46
SMC5-202ENST00000471372 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.96□□□□□ -1.46
SMC5-202ENST00000471372 LRRC17Q8N6Y2 441 aa5.96□□□□□ -1.46
SMC5-202ENST00000471372 KBTBD3Q8NAB2 608 aa5.96□□□□□ -1.46
SMC5-202ENST00000471372 GPRC5AQ8NFJ5 357 aa5.96□□□□□ -1.46
SMC5-202ENST00000471372 OR4L1Q8NH43 312 aa5.96□□□□□ -1.46
SMC5-202ENST00000471372 CD99L2Q8TCZ2 262 aa5.96□□□□□ -1.46
SMC5-202ENST00000471372 RAB39BQ96DA2 213 aa5.96□□□□□ -1.46
SMC5-202ENST00000471372 IWS1Q96ST2 819 aa5.96□□□□□ -1.46
SMC5-202ENST00000471372 MRIQ9BWK5 157 aa5.96□□□□□ -1.46
SMC5-202ENST00000471372 NMNAT2Q9BZQ4 307 aa5.96□□□□□ -1.46
SMC5-202ENST00000471372 NT5C3AQ9H0P0 336 aa5.96□□□□□ -1.46
SMC5-202ENST00000471372 ZNF665Q9H7R5 613 aa5.96□□□□□ -1.46
SMC5-202ENST00000471372 MARCH7Q9H992 704 aa5.96□□□□□ -1.46
SMC5-202ENST00000471372 UPF2Q9HAU5 1272 aaKnown RBP5.96□□□□□ -1.46
SMC5-202ENST00000471372 ECHDC1Q9NTX5 307 aa5.96□□□□□ -1.46
SMC5-202ENST00000471372 EXOC1Q9NV70 894 aa5.96□□□□□ -1.46
SMC5-202ENST00000471372 TBC1D13Q9NVG8 400 aa5.96□□□□□ -1.46
SMC5-202ENST00000471372 RNF186Q9NXI6 227 aa5.96□□□□□ -1.46
SMC5-202ENST00000471372 SATB2Q9UPW6 733 aa5.96□□□□□ -1.46
SMC5-202ENST00000471372 MGAT4BQ9UQ53 548 aa5.96□□□□□ -1.46
SMC5-202ENST00000471372 KIF3AQ9Y496 699 aa5.96□□□□□ -1.46
SMC5-202ENST00000471372 IKBKGQ9Y6K9 419 aa5.96□□□□□ -1.46
SMC5-202ENST00000471372 SERINC4A6NH21 518 aa5.95□□□□□ -1.46
SMC5-202ENST00000471372 A8MVM7 634 aa5.95□□□□□ -1.46
SMC5-202ENST00000471372 GPR89AB7ZAQ6 455 aa5.95□□□□□ -1.46
SMC5-202ENST00000471372 MCF2LO15068 1137 aa5.95□□□□□ -1.46
SMC5-202ENST00000471372 DFFBO76075 338 aa5.95□□□□□ -1.46
SMC5-202ENST00000471372 SYNGR4O95473 234 aa5.95□□□□□ -1.46
SMC5-202ENST00000471372 PRAMEF12O95522 483 aa5.95□□□□□ -1.46
SMC5-202ENST00000471372 GPR89BP0CG08 455 aa5.95□□□□□ -1.46
SMC5-202ENST00000471372 LIFP15018 202 aa5.95□□□□□ -1.46
SMC5-202ENST00000471372 FCARP24071 287 aa5.95□□□□□ -1.46
SMC5-202ENST00000471372 SLC1A3P43003 542 aa5.95□□□□□ -1.46
SMC5-202ENST00000471372 HOXA1P49639 335 aaPredicted RBP5.95□□□□□ -1.46
SMC5-202ENST00000471372 DVL1P1P54792 670 aaPredicted RBP5.95□□□□□ -1.46
SMC5-202ENST00000471372 GEMP55040 296 aa5.95□□□□□ -1.46
SMC5-202ENST00000471372 OR1D5P58170 312 aa5.95□□□□□ -1.46
SMC5-202ENST00000471372 MYL7Q01449 175 aa5.95□□□□□ -1.46
SMC5-202ENST00000471372 GABPAQ06546 454 aa5.95□□□□□ -1.46
SMC5-202ENST00000471372 SGCGQ13326 291 aa5.95□□□□□ -1.46
SMC5-202ENST00000471372 RFTN1Q14699 578 aaPredicted RBP5.95□□□□□ -1.46
SMC5-202ENST00000471372 HEPACAMQ14CZ8 416 aa5.95□□□□□ -1.46
SMC5-202ENST00000471372 ZKSCAN8Q15776 578 aaPredicted RBP5.95□□□□□ -1.46
SMC5-202ENST00000471372 LRRC37A5PQ49AS3 106 aa5.95□□□□□ -1.46
SMC5-202ENST00000471372 GPAT3Q53EU6 434 aa5.95□□□□□ -1.46
SMC5-202ENST00000471372 XKR6Q5GH73 641 aa5.95□□□□□ -1.46
SMC5-202ENST00000471372 LCN1P1Q5VSP4 162 aa5.95□□□□□ -1.46
SMC5-202ENST00000471372 LYPLAL1Q5VWZ2 237 aa5.95□□□□□ -1.46
SMC5-202ENST00000471372 SNRNP48Q6IEG0 339 aaKnown RBP5.95□□□□□ -1.46
SMC5-202ENST00000471372 FAM159AQ6UWV7 190 aa5.95□□□□□ -1.46
SMC5-202ENST00000471372 TMEM64Q6YI46 380 aa5.95□□□□□ -1.46
SMC5-202ENST00000471372 C15orf52Q6ZUT6 534 aaKnown RBP5.95□□□□□ -1.46
SMC5-202ENST00000471372 SLC43A2Q8N370 569 aa5.95□□□□□ -1.46
SMC5-202ENST00000471372 BCORP1Q8N888 145 aa5.95□□□□□ -1.46
SMC5-202ENST00000471372 OR2T34Q8NGX1 318 aa5.95□□□□□ -1.46
SMC5-202ENST00000471372 SLC35C1Q96A29 364 aa5.95□□□□□ -1.46
SMC5-202ENST00000471372 SCRN2Q96FV2 425 aa5.95□□□□□ -1.46
SMC5-202ENST00000471372 ST6GAL2Q96JF0 529 aa5.95□□□□□ -1.46
SMC5-202ENST00000471372 SSX3Q99909 188 aa5.95□□□□□ -1.46
SMC5-202ENST00000471372 TPPP3Q9BW30 176 aa5.95□□□□□ -1.46
SMC5-202ENST00000471372 FUNDC2Q9BWH2 189 aa5.95□□□□□ -1.46
SMC5-202ENST00000471372 ZNF416Q9BWM5 594 aa5.95□□□□□ -1.46
SMC5-202ENST00000471372 THAP2Q9H0W7 228 aa5.95□□□□□ -1.46
SMC5-202ENST00000471372 GANQ9H2C0 597 aa5.95□□□□□ -1.46
SMC5-202ENST00000471372 TFB2MQ9H5Q4 396 aaKnown RBP5.95□□□□□ -1.46
SMC5-202ENST00000471372 VAT1LQ9HCJ6 419 aa5.95□□□□□ -1.46
SMC5-202ENST00000471372 C19orf25Q9UFG5 118 aaPredicted RBP5.95□□□□□ -1.46
SMC5-202ENST00000471372 FBXL4Q9UKA2 621 aa5.95□□□□□ -1.46
SMC5-202ENST00000471372 MFHAS1Q9Y4C4 1052 aa5.95□□□□□ -1.46
SMC5-202ENST00000471372 OR1A2Q9Y585 309 aa5.95□□□□□ -1.46
SMC5-202ENST00000471372 ABCC4O15439 1325 aa5.95□□□□□ -1.46
SMC5-202ENST00000471372 KDRP35968 1356 aa5.94□□□□□ -1.46
SMC5-202ENST00000471372 A0A1W2PS18 150 aa5.94□□□□□ -1.46
SMC5-202ENST00000471372 DENND3A2RUS2 1198 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms