RNA–Protein interactions for RNA: ENST00000469744.1

MRPL28-208, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,467 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-208ENST00000469744 PIGGQ5H8A4 983 aa16.8■□□□□ 0.28
MRPL28-208ENST00000469744 COLEC12Q5KU26 742 aa16.8■□□□□ 0.28
MRPL28-208ENST00000469744 C1orf189Q5VU69 101 aa16.8■□□□□ 0.28
MRPL28-208ENST00000469744 SBSNQ6UWP8 590 aa16.8■□□□□ 0.28
MRPL28-208ENST00000469744 LRRC74BQ6ZQY2 392 aa16.8■□□□□ 0.28
MRPL28-208ENST00000469744 ZNF655Q8N720 491 aaPredicted RBP16.8■□□□□ 0.28
MRPL28-208ENST00000469744 TSPEARQ8WU66 669 aa16.8■□□□□ 0.28
MRPL28-208ENST00000469744 NSUN5Q96P11 429 aaKnown RBP16.8■□□□□ 0.28
MRPL28-208ENST00000469744 S100A14Q9HCY8 104 aa16.8■□□□□ 0.28
MRPL28-208ENST00000469744 TNRC6AQ8NDV7 1962 aaKnown RBP16.79■□□□□ 0.28
MRPL28-208ENST00000469744 MYO18BQ8IUG5 2567 aa16.79■□□□□ 0.28
MRPL28-208ENST00000469744 K7EM74 188 aa16.79■□□□□ 0.28
MRPL28-208ENST00000469744 E2F3O00716 465 aa16.79■□□□□ 0.28
MRPL28-208ENST00000469744 PIP5K1BO14986 540 aa16.79■□□□□ 0.28
MRPL28-208ENST00000469744 CRCPO75575 148 aa16.79■□□□□ 0.28
MRPL28-208ENST00000469744 MATN4O95460 622 aa16.79■□□□□ 0.28
MRPL28-208ENST00000469744 ENO3P13929 434 aaPredicted RBP16.79■□□□□ 0.28
MRPL28-208ENST00000469744 ANPEPP15144 967 aa16.79■□□□□ 0.28
MRPL28-208ENST00000469744 GPX3P22352 226 aa16.79■□□□□ 0.28
MRPL28-208ENST00000469744 CHAF1BQ13112 559 aa16.79■□□□□ 0.28
MRPL28-208ENST00000469744 CCNIQ14094 377 aa16.79■□□□□ 0.28
MRPL28-208ENST00000469744 GBX1Q14549 363 aa16.79■□□□□ 0.28
MRPL28-208ENST00000469744 SF1Q15637 639 aaKnown RBP16.79■□□□□ 0.28
MRPL28-208ENST00000469744 PPP1R3AQ16821 1122 aa16.79■□□□□ 0.28
MRPL28-208ENST00000469744 UGT8Q16880 541 aa16.79■□□□□ 0.28
MRPL28-208ENST00000469744 AGKQ53H12 422 aa16.79■□□□□ 0.28
MRPL28-208ENST00000469744 CPZQ66K79 652 aa16.79■□□□□ 0.28
MRPL28-208ENST00000469744 RNF165Q6ZSG1 346 aa16.79■□□□□ 0.28
MRPL28-208ENST00000469744 GPRIN3Q6ZVF9 776 aa16.79■□□□□ 0.28
MRPL28-208ENST00000469744 FRA10AC1Q70Z53 315 aa16.79■□□□□ 0.28
MRPL28-208ENST00000469744 SYVN1Q86TM6 617 aa16.79■□□□□ 0.28
MRPL28-208ENST00000469744 DNAJC22Q8N4W6 341 aa16.79■□□□□ 0.28
MRPL28-208ENST00000469744 HMGCLL1Q8TB92 370 aa16.79■□□□□ 0.28
MRPL28-208ENST00000469744 UBTD2Q8WUN7 234 aa16.79■□□□□ 0.28
MRPL28-208ENST00000469744 RAD51AP1Q96B01 352 aa16.79■□□□□ 0.28
MRPL28-208ENST00000469744 RSRC1Q96IZ7 334 aaKnown RBP16.79■□□□□ 0.28
MRPL28-208ENST00000469744 MARK4Q96L34 752 aa16.79■□□□□ 0.28
MRPL28-208ENST00000469744 C3orf30Q96M34 536 aa16.79■□□□□ 0.28
MRPL28-208ENST00000469744 WDR41Q9HAD4 459 aa16.79■□□□□ 0.28
MRPL28-208ENST00000469744 DHCR7Q9UBM7 475 aaKnown RBP16.79■□□□□ 0.28
MRPL28-208ENST00000469744 SNX7Q9UNH6 387 aa16.79■□□□□ 0.28
MRPL28-208ENST00000469744 PPP6CO00743 305 aa16.78■□□□□ 0.28
MRPL28-208ENST00000469744 ZSCAN9O15535 394 aaPredicted RBP16.78■□□□□ 0.28
MRPL28-208ENST00000469744 SUV39H1O43463 412 aa16.78■□□□□ 0.28
MRPL28-208ENST00000469744 GRIA3P42263 894 aa16.78■□□□□ 0.28
MRPL28-208ENST00000469744 SLC9A5Q14940 896 aa16.78■□□□□ 0.28
MRPL28-208ENST00000469744 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.78■□□□□ 0.28
MRPL28-208ENST00000469744 ZNF385CQ66K41 422 aaPredicted RBP16.78■□□□□ 0.28
MRPL28-208ENST00000469744 GK5Q6ZS86 529 aa16.78■□□□□ 0.28
MRPL28-208ENST00000469744 PPFIBP2Q8ND30 876 aa16.78■□□□□ 0.28
MRPL28-208ENST00000469744 FOPNLQ96NB1 174 aa16.78■□□□□ 0.28
MRPL28-208ENST00000469744 NLNQ9BYT8 704 aa16.78■□□□□ 0.28
MRPL28-208ENST00000469744 TUBB1Q9H4B7 451 aa16.78■□□□□ 0.28
MRPL28-208ENST00000469744 SEMA4BQ9NPR2 832 aaPredicted RBP16.78■□□□□ 0.28
MRPL28-208ENST00000469744 PTBP2Q9UKA9 531 aaKnown RBP16.78■□□□□ 0.28
MRPL28-208ENST00000469744 TCFL5Q9UL49 500 aa16.78■□□□□ 0.28
MRPL28-208ENST00000469744 PLCL2Q9UPR0 1127 aa16.78■□□□□ 0.28
MRPL28-208ENST00000469744 TP53TG5Q9Y2B4 290 aa16.78■□□□□ 0.28
MRPL28-208ENST00000469744 ARHGEF33A8MVX0 844 aa16.77■□□□□ 0.28
MRPL28-208ENST00000469744 PDE5AO76074 875 aa16.77■□□□□ 0.28
MRPL28-208ENST00000469744 ALDOCP09972 364 aaKnown RBP16.77■□□□□ 0.28
MRPL28-208ENST00000469744 RAB40ALP0C0E4 278 aa16.77■□□□□ 0.28
MRPL28-208ENST00000469744 IDO1P14902 403 aa16.77■□□□□ 0.28
MRPL28-208ENST00000469744 CD1EP15812 388 aa16.77■□□□□ 0.28
MRPL28-208ENST00000469744 AGTR2P50052 363 aa16.77■□□□□ 0.28
MRPL28-208ENST00000469744 GTF2A1P52655 376 aaPredicted RBP16.77■□□□□ 0.28
MRPL28-208ENST00000469744 FOXA1P55317 472 aa16.77■□□□□ 0.28
MRPL28-208ENST00000469744 FOXL2P58012 376 aa16.77■□□□□ 0.28
MRPL28-208ENST00000469744 NCF4Q15080 339 aa16.77■□□□□ 0.28
MRPL28-208ENST00000469744 XKR7Q5GH72 579 aa16.77■□□□□ 0.28
MRPL28-208ENST00000469744 COQ5Q5HYK3 327 aa16.77■□□□□ 0.28
MRPL28-208ENST00000469744 FCRL6Q6DN72 434 aa16.77■□□□□ 0.28
MRPL28-208ENST00000469744 SULT1C3Q6IMI6 304 aa16.77■□□□□ 0.28
MRPL28-208ENST00000469744 HPS6Q86YV9 775 aa16.77■□□□□ 0.28
MRPL28-208ENST00000469744 SLC22A18Q96BI1 424 aa16.77■□□□□ 0.28
MRPL28-208ENST00000469744 ROPN1LQ96C74 230 aa16.77■□□□□ 0.28
MRPL28-208ENST00000469744 CDRT15Q96T59 188 aa16.77■□□□□ 0.28
MRPL28-208ENST00000469744 RAB11FIP5Q9BXF6 653 aa16.77■□□□□ 0.28
MRPL28-208ENST00000469744 CHRNA10Q9GZZ6 450 aa16.77■□□□□ 0.28
MRPL28-208ENST00000469744 RIC8BQ9NVN3 520 aa16.77■□□□□ 0.28
MRPL28-208ENST00000469744 NDUFAF1Q9Y375 327 aa16.77■□□□□ 0.28
MRPL28-208ENST00000469744 NBASA2RRP1 2371 aa16.77■□□□□ 0.27
MRPL28-208ENST00000469744 PCSK5Q92824 1860 aa16.76■□□□□ 0.27
MRPL28-208ENST00000469744 PCM1Q15154 2024 aa16.76■□□□□ 0.27
MRPL28-208ENST00000469744 ARGFXA6NJG6 315 aa16.76■□□□□ 0.27
MRPL28-208ENST00000469744 MKRN2OSH3BPM6 223 aa16.76■□□□□ 0.27
MRPL28-208ENST00000469744 PRICKLE3O43900 615 aaPredicted RBP16.76■□□□□ 0.27
MRPL28-208ENST00000469744 NRP2O60462 931 aa16.76■□□□□ 0.27
MRPL28-208ENST00000469744 RECKO95980 971 aa16.76■□□□□ 0.27
MRPL28-208ENST00000469744 HBQ1P09105 142 aa16.76■□□□□ 0.27
MRPL28-208ENST00000469744 ACADSP16219 412 aa16.76■□□□□ 0.27
MRPL28-208ENST00000469744 ME2P23368 584 aa16.76■□□□□ 0.27
MRPL28-208ENST00000469744 YBX1P67809 324 aaKnown RBP16.76■□□□□ 0.27
MRPL28-208ENST00000469744 TAF11Q15544 211 aa16.76■□□□□ 0.27
MRPL28-208ENST00000469744 RBBP7Q16576 425 aa16.76■□□□□ 0.27
MRPL28-208ENST00000469744 REP15Q6BDI9 236 aa16.76■□□□□ 0.27
MRPL28-208ENST00000469744 FIGLAQ6QHK4 219 aa16.76■□□□□ 0.27
MRPL28-208ENST00000469744 MCATQ8IVS2 390 aaKnown RBP16.76■□□□□ 0.27
MRPL28-208ENST00000469744 DDIASQ8IXT1 998 aa16.76■□□□□ 0.27
MRPL28-208ENST00000469744 MIER2Q8N344 545 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms