RNA–Protein interactions for RNA: ENST00000466489.1

PMF1-204, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-204ENST00000466489 KCNH1O95259 989 aa9.6□□□□□ -0.87
PMF1-204ENST00000466489 F7P08709 466 aaPredicted RBP9.6□□□□□ -0.87
PMF1-204ENST00000466489 PRR35P0CG20 571 aa9.6□□□□□ -0.87
PMF1-204ENST00000466489 TYRP1P17643 537 aa9.6□□□□□ -0.87
PMF1-204ENST00000466489 TCN1P20061 433 aaPredicted RBP9.6□□□□□ -0.87
PMF1-204ENST00000466489 JAK1P23458 1154 aa9.6□□□□□ -0.87
PMF1-204ENST00000466489 SLC6A2P23975 617 aa9.6□□□□□ -0.87
PMF1-204ENST00000466489 CD1CP29017 333 aa9.6□□□□□ -0.87
PMF1-204ENST00000466489 CCKBRP32239 447 aa9.6□□□□□ -0.87
PMF1-204ENST00000466489 CSTF2P33240 577 aaKnown RBP eCLIP9.6□□□□□ -0.87
PMF1-204ENST00000466489 ARL4DP49703 201 aa9.6□□□□□ -0.87
PMF1-204ENST00000466489 RAB28P51157 221 aa9.6□□□□□ -0.87
PMF1-204ENST00000466489 CDKN2DP55273 166 aa9.6□□□□□ -0.87
PMF1-204ENST00000466489 HPCAP84074 193 aa9.6□□□□□ -0.87
PMF1-204ENST00000466489 OCA2Q04671 838 aa9.6□□□□□ -0.87
PMF1-204ENST00000466489 GBX1Q14549 363 aa9.6□□□□□ -0.87
PMF1-204ENST00000466489 PCBP2Q15366 365 aaKnown RBP eCLIP9.6□□□□□ -0.873e-6■□□□□ 11.2
PMF1-204ENST00000466489 ISXQ2M1V0 245 aa9.6□□□□□ -0.87
PMF1-204ENST00000466489 DPY19L1Q2PZI1 675 aa9.6□□□□□ -0.87
PMF1-204ENST00000466489 NKAIN2Q5VXU1 208 aa9.6□□□□□ -0.87
PMF1-204ENST00000466489 PAQR3Q6TCH7 311 aa9.6□□□□□ -0.87
PMF1-204ENST00000466489 HIPK1Q86Z02 1210 aa9.6□□□□□ -0.87
PMF1-204ENST00000466489 VRK3Q8IV63 474 aa9.6□□□□□ -0.87
PMF1-204ENST00000466489 CARFQ8N187 725 aa9.6□□□□□ -0.87
PMF1-204ENST00000466489 ZNF786Q8N393 782 aa9.6□□□□□ -0.87
PMF1-204ENST00000466489 CBR4Q8N4T8 237 aa9.6□□□□□ -0.87
PMF1-204ENST00000466489 DCBLD1Q8N8Z6 715 aa9.6□□□□□ -0.87
PMF1-204ENST00000466489 OR4E2Q8NGC2 313 aa9.6□□□□□ -0.87
PMF1-204ENST00000466489 OR52E1Q8NGJ3 308 aa9.6□□□□□ -0.87
PMF1-204ENST00000466489 CANT1Q8WVQ1 401 aa9.6□□□□□ -0.87
PMF1-204ENST00000466489 SLC22A18Q96BI1 424 aa9.6□□□□□ -0.87
PMF1-204ENST00000466489 TBC1D20Q96BZ9 403 aa9.6□□□□□ -0.87
PMF1-204ENST00000466489 ATOH8Q96SQ7 321 aa9.6□□□□□ -0.87
PMF1-204ENST00000466489 CMKLR1Q99788 373 aa9.6□□□□□ -0.87
PMF1-204ENST00000466489 SPATA9Q9BWV2 254 aa9.6□□□□□ -0.87
PMF1-204ENST00000466489 SLC29A3Q9BZD2 475 aa9.6□□□□□ -0.87
PMF1-204ENST00000466489 RAB33BQ9H082 229 aa9.6□□□□□ -0.87
PMF1-204ENST00000466489 CXorf21Q9HAI6 301 aa9.6□□□□□ -0.87
PMF1-204ENST00000466489 RDH14Q9HBH5 336 aa9.6□□□□□ -0.87
PMF1-204ENST00000466489 CCNB1IP1Q9NPC3 277 aa9.6□□□□□ -0.87
PMF1-204ENST00000466489 OR6C2Q9NZP2 312 aa9.6□□□□□ -0.87
PMF1-204ENST00000466489 SPATA7Q9P0W8 599 aa9.6□□□□□ -0.87
PMF1-204ENST00000466489 ATXN7L1Q9ULK2 861 aaPredicted RBP9.6□□□□□ -0.87
PMF1-204ENST00000466489 G3BP2Q9UN86 482 aaKnown RBP9.6□□□□□ -0.87
PMF1-204ENST00000466489 NEUROG3Q9Y4Z2 214 aa9.6□□□□□ -0.87
PMF1-204ENST00000466489 PCDHA9Q9Y5H5 950 aa9.6□□□□□ -0.87
PMF1-204ENST00000466489 ENTPD2Q9Y5L3 495 aa9.6□□□□□ -0.87
PMF1-204ENST00000466489 SNX5Q9Y5X3 404 aa9.6□□□□□ -0.87
PMF1-204ENST00000466489 CACNA1AO00555 2505 aa9.6□□□□□ -0.87
PMF1-204ENST00000466489 MN1Q10571 1320 aaPredicted RBP9.59□□□□□ -0.87
PMF1-204ENST00000466489 CCDC187A0A096LP49 1063 aa9.59□□□□□ -0.87
PMF1-204ENST00000466489 PIPSLA2A3N6 862 aa9.59□□□□□ -0.87
PMF1-204ENST00000466489 OR6C74A6NCV1 312 aa9.59□□□□□ -0.87
PMF1-204ENST00000466489 EIF4E1BA6NMX2 242 aaKnown RBP9.59□□□□□ -0.87
PMF1-204ENST00000466489 PIP5K1BO14986 540 aa9.59□□□□□ -0.87
PMF1-204ENST00000466489 GSTA4O15217 222 aa9.59□□□□□ -0.87
PMF1-204ENST00000466489 CAPN5O15484 640 aaPredicted RBP9.59□□□□□ -0.87
PMF1-204ENST00000466489 HYAL3O43820 417 aaPredicted RBP9.59□□□□□ -0.87
PMF1-204ENST00000466489 PRMT3O60678 531 aa9.59□□□□□ -0.87
PMF1-204ENST00000466489 PSIP1O75475 530 aaKnown RBP9.59□□□□□ -0.87
PMF1-204ENST00000466489 C1orf105O95561 183 aa9.59□□□□□ -0.87
PMF1-204ENST00000466489 KRT6AP02538 564 aa9.59□□□□□ -0.87
PMF1-204ENST00000466489 KRT6BP04259 564 aa9.59□□□□□ -0.87
PMF1-204ENST00000466489 RPS17P08708 135 aaKnown RBP9.59□□□□□ -0.87
PMF1-204ENST00000466489 JMJD7P0C870 316 aa9.59□□□□□ -0.87
PMF1-204ENST00000466489 DDX5P17844 614 aaKnown RBP9.59□□□□□ -0.87
PMF1-204ENST00000466489 DCKP27707 260 aa9.59□□□□□ -0.87
PMF1-204ENST00000466489 KRT6CP48668 564 aa9.59□□□□□ -0.87
PMF1-204ENST00000466489 AP1S2P56377 157 aa9.59□□□□□ -0.87
PMF1-204ENST00000466489 MVKQ03426 396 aa9.59□□□□□ -0.87
PMF1-204ENST00000466489 LIPEQ05469 1076 aa9.59□□□□□ -0.87
PMF1-204ENST00000466489 TARDBPQ13148 414 aaKnown RBP eCLIP9.59□□□□□ -0.87
PMF1-204ENST00000466489 PWP1Q13610 501 aa9.59□□□□□ -0.87
PMF1-204ENST00000466489 GK3PQ14409 553 aa9.59□□□□□ -0.87
PMF1-204ENST00000466489 ARHGAP19Q14CB8 494 aa9.59□□□□□ -0.87
PMF1-204ENST00000466489 NRF1Q16656 503 aa9.59□□□□□ -0.87
PMF1-204ENST00000466489 XKR7Q5GH72 579 aa9.59□□□□□ -0.87
PMF1-204ENST00000466489 SNAP47Q5SQN1 464 aa9.59□□□□□ -0.87
PMF1-204ENST00000466489 CDCP2Q5VXM1 449 aa9.59□□□□□ -0.87
PMF1-204ENST00000466489 ZNF773Q6PK81 442 aa9.59□□□□□ -0.87
PMF1-204ENST00000466489 GK5Q6ZS86 529 aa9.59□□□□□ -0.87
PMF1-204ENST00000466489 UBE2R2Q712K3 238 aaPredicted RBP9.59□□□□□ -0.87
PMF1-204ENST00000466489 SNX31Q8N9S9 440 aa9.59□□□□□ -0.87
PMF1-204ENST00000466489 FAM47BQ8NA70 645 aa9.59□□□□□ -0.87
PMF1-204ENST00000466489 FBXO15Q8NCQ5 510 aaPredicted RBP9.59□□□□□ -0.87
PMF1-204ENST00000466489 AGBL5Q8NDL9 886 aa9.59□□□□□ -0.87
PMF1-204ENST00000466489 WDR36Q8NI36 951 aaKnown RBP9.59□□□□□ -0.87
PMF1-204ENST00000466489 EEF1AKMT1Q8WVE0 214 aa9.59□□□□□ -0.87
PMF1-204ENST00000466489 RSC1A1Q92681 617 aa9.59□□□□□ -0.87
PMF1-204ENST00000466489 HDAC2Q92769 488 aaKnown RBP9.59□□□□□ -0.87
PMF1-204ENST00000466489 NXPE2Q96DL1 559 aa9.59□□□□□ -0.87
PMF1-204ENST00000466489 ITPKCQ96DU7 683 aa9.59□□□□□ -0.87
PMF1-204ENST00000466489 LIN37Q96GY3 246 aaPredicted RBP9.59□□□□□ -0.87
PMF1-204ENST00000466489 TGM7Q96PF1 710 aa9.59□□□□□ -0.87
PMF1-204ENST00000466489 OLFM1Q99784 485 aa9.59□□□□□ -0.87
PMF1-204ENST00000466489 CIB1Q99828 191 aa9.59□□□□□ -0.87
PMF1-204ENST00000466489 NUDT22Q9BRQ3 303 aa9.59□□□□□ -0.87
PMF1-204ENST00000466489 INTS7Q9NVH2 962 aaKnown RBP9.59□□□□□ -0.87
PMF1-204ENST00000466489 GALNT8Q9NY28 637 aa9.59□□□□□ -0.87
PMF1-204ENST00000466489 EPHA6Q9UF33 1036 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms