RNA–Protein interactions for RNA: ENST00000466141.1

RPUSD3-212, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 996 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-212ENST00000466141 C17orf67Q0P5P2 114 aa7.03□□□□□ -1.28
RPUSD3-212ENST00000466141 C1orf61Q13536 156 aa7.03□□□□□ -1.28
RPUSD3-212ENST00000466141 PDK1Q15118 436 aa7.03□□□□□ -1.28
RPUSD3-212ENST00000466141 NOMO1Q15155 1222 aa7.03□□□□□ -1.28
RPUSD3-212ENST00000466141 NR0B2Q15466 257 aa7.03□□□□□ -1.28
RPUSD3-212ENST00000466141 TGFBIQ15582 683 aa7.03□□□□□ -1.28
RPUSD3-212ENST00000466141 SLC9B1Q4ZJI4 515 aa7.03□□□□□ -1.28
RPUSD3-212ENST00000466141 YIF1BQ5BJH7 314 aa7.03□□□□□ -1.28
RPUSD3-212ENST00000466141 TCHHL1Q5QJ38 904 aaPredicted RBP7.03□□□□□ -1.28
RPUSD3-212ENST00000466141 TBCELQ5QJ74 424 aa7.03□□□□□ -1.28
RPUSD3-212ENST00000466141 MARC1Q5VT66 337 aa7.03□□□□□ -1.28
RPUSD3-212ENST00000466141 GARNL3Q5VVW2 1013 aa7.03□□□□□ -1.28
RPUSD3-212ENST00000466141 FRA10AC1Q70Z53 315 aa7.03□□□□□ -1.28
RPUSD3-212ENST00000466141 UBE2R2Q712K3 238 aaPredicted RBP7.03□□□□□ -1.28
RPUSD3-212ENST00000466141 GSTA5Q7RTV2 222 aa7.03□□□□□ -1.28
RPUSD3-212ENST00000466141 FAM122BQ7Z309 247 aa7.03□□□□□ -1.28
RPUSD3-212ENST00000466141 HDDC2Q7Z4H3 204 aa7.03□□□□□ -1.28
RPUSD3-212ENST00000466141 ABI3BPQ7Z7G0 1075 aa7.03□□□□□ -1.28
RPUSD3-212ENST00000466141 LRRTM4Q86VH4 590 aa7.03□□□□□ -1.28
RPUSD3-212ENST00000466141 ZFAND4Q86XD8 727 aa7.03□□□□□ -1.28
RPUSD3-212ENST00000466141 SLC35F3Q8IY50 421 aa7.03□□□□□ -1.28
RPUSD3-212ENST00000466141 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.03□□□□□ -1.287e-6■■■■□ 20.7
RPUSD3-212ENST00000466141 RCOR2Q8IZ40 523 aa7.03□□□□□ -1.28
RPUSD3-212ENST00000466141 RBFAQ8N0V3 343 aa7.03□□□□□ -1.28
RPUSD3-212ENST00000466141 FBXO39Q8N4B4 442 aa7.03□□□□□ -1.28
RPUSD3-212ENST00000466141 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.03□□□□□ -1.28
RPUSD3-212ENST00000466141 PSD4Q8NDX1 1056 aa7.03□□□□□ -1.28
RPUSD3-212ENST00000466141 FAM13CQ8NE31 585 aa7.03□□□□□ -1.28
RPUSD3-212ENST00000466141 SPATA4Q8NEY3 305 aa7.03□□□□□ -1.28
RPUSD3-212ENST00000466141 BBS1Q8NFJ9 593 aa7.03□□□□□ -1.28
RPUSD3-212ENST00000466141 OR5T1Q8NG75 326 aa7.03□□□□□ -1.28
RPUSD3-212ENST00000466141 GRPEL2Q8TAA5 225 aa7.03□□□□□ -1.28
RPUSD3-212ENST00000466141 VANGL1Q8TAA9 524 aaPredicted RBP7.03□□□□□ -1.28
RPUSD3-212ENST00000466141 ARRDC2Q8TBH0 407 aa7.03□□□□□ -1.28
RPUSD3-212ENST00000466141 PYDC1Q8WXC3 89 aa7.03□□□□□ -1.28
RPUSD3-212ENST00000466141 NANOS1Q8WY41 292 aaKnown RBP7.03□□□□□ -1.28
RPUSD3-212ENST00000466141 RFT1Q96AA3 541 aa7.03□□□□□ -1.28
RPUSD3-212ENST00000466141 NMD3Q96D46 503 aaKnown RBP7.03□□□□□ -1.28
RPUSD3-212ENST00000466141 TMEM41AQ96HV5 264 aa7.03□□□□□ -1.28
RPUSD3-212ENST00000466141 BMFQ96LC9 184 aa7.03□□□□□ -1.28
RPUSD3-212ENST00000466141 PPP1R36Q96LQ0 422 aa7.03□□□□□ -1.28
RPUSD3-212ENST00000466141 IL12RB2Q99665 862 aa7.03□□□□□ -1.28
RPUSD3-212ENST00000466141 CCDC3Q9BQI4 270 aa7.03□□□□□ -1.28
RPUSD3-212ENST00000466141 C1QTNF2Q9BXJ5 285 aa7.03□□□□□ -1.28
RPUSD3-212ENST00000466141 TRIM54Q9BYV2 358 aa7.03□□□□□ -1.28
RPUSD3-212ENST00000466141 HOXD1Q9GZZ0 328 aa7.03□□□□□ -1.28
RPUSD3-212ENST00000466141 ZNF275Q9NSD4 429 aaPredicted RBP7.03□□□□□ -1.28
RPUSD3-212ENST00000466141 SNTG1Q9NSN8 517 aa7.03□□□□□ -1.28
RPUSD3-212ENST00000466141 SLC35D1Q9NTN3 355 aa7.03□□□□□ -1.28
RPUSD3-212ENST00000466141 EVA1BQ9NVM1 165 aa7.03□□□□□ -1.28
RPUSD3-212ENST00000466141 SAE1Q9UBE0 346 aaPredicted RBP7.03□□□□□ -1.28
RPUSD3-212ENST00000466141 PISDQ9UG56 409 aa7.03□□□□□ -1.28
RPUSD3-212ENST00000466141 TRMT6Q9UJA5 497 aaKnown RBP7.03□□□□□ -1.28
RPUSD3-212ENST00000466141 GUCA1BQ9UMX6 200 aa7.03□□□□□ -1.28
RPUSD3-212ENST00000466141 EIF3LQ9Y262 564 aaKnown RBP7.03□□□□□ -1.28
RPUSD3-212ENST00000466141 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.03□□□□□ -1.28
RPUSD3-212ENST00000466141 PCDHGA7Q9Y5G6 932 aa7.03□□□□□ -1.28
RPUSD3-212ENST00000466141 PCDHGA6Q9Y5G7 932 aa7.03□□□□□ -1.28
RPUSD3-212ENST00000466141 FBN2P35556 2912 aa7.03□□□□□ -1.28
RPUSD3-212ENST00000466141 PRAMEF33A0A0G2JMD5 474 aa7.02□□□□□ -1.29
RPUSD3-212ENST00000466141 RNF103-CHMP3A0A140T963 221 aa7.02□□□□□ -1.29
RPUSD3-212ENST00000466141 OR6C70A6NIJ9 312 aa7.02□□□□□ -1.29
RPUSD3-212ENST00000466141 APOC4-APOC2K7ER74 178 aa7.02□□□□□ -1.29
RPUSD3-212ENST00000466141 ACOX3O15254 700 aa7.02□□□□□ -1.29
RPUSD3-212ENST00000466141 AQP9O43315 295 aa7.02□□□□□ -1.29
RPUSD3-212ENST00000466141 PROM1O43490 865 aa7.02□□□□□ -1.29
RPUSD3-212ENST00000466141 PRAMEF10O60809 474 aa7.02□□□□□ -1.29
RPUSD3-212ENST00000466141 GCATO75600 419 aa7.02□□□□□ -1.29
RPUSD3-212ENST00000466141 TJP3O95049 919 aa7.02□□□□□ -1.29
RPUSD3-212ENST00000466141 PCDH8O95206 1070 aa7.02□□□□□ -1.29
RPUSD3-212ENST00000466141 PGLSO95336 258 aa7.02□□□□□ -1.29
RPUSD3-212ENST00000466141 CSTAP01040 98 aa7.02□□□□□ -1.29
RPUSD3-212ENST00000466141 APOC2P02655 101 aa7.02□□□□□ -1.29
RPUSD3-212ENST00000466141 CSF2P04141 144 aa7.02□□□□□ -1.29
RPUSD3-212ENST00000466141 PRKCGP05129 697 aa7.02□□□□□ -1.29
RPUSD3-212ENST00000466141 TMIGD3P0DMS9 266 aaPredicted RBP7.02□□□□□ -1.29
RPUSD3-212ENST00000466141 LIPCP11150 499 aa7.02□□□□□ -1.29
RPUSD3-212ENST00000466141 ESRRAP11474 423 aaPredicted RBP7.02□□□□□ -1.29
RPUSD3-212ENST00000466141 MLNP12872 115 aa7.02□□□□□ -1.29
RPUSD3-212ENST00000466141 NME1P15531 152 aaKnown RBP7.02□□□□□ -1.29
RPUSD3-212ENST00000466141 GM2AP17900 193 aa7.02□□□□□ -1.29
RPUSD3-212ENST00000466141 GNAZP19086 355 aa7.02□□□□□ -1.29
RPUSD3-212ENST00000466141 TCN1P20061 433 aaPredicted RBP7.02□□□□□ -1.29
RPUSD3-212ENST00000466141 LHCGRP22888 699 aa7.02□□□□□ -1.29
RPUSD3-212ENST00000466141 PTPN3P26045 913 aa7.02□□□□□ -1.29
RPUSD3-212ENST00000466141 SLC7A1P30825 629 aa7.02□□□□□ -1.29
RPUSD3-212ENST00000466141 IGFALSP35858 605 aa7.02□□□□□ -1.29
RPUSD3-212ENST00000466141 SERPINB5P36952 375 aa7.02□□□□□ -1.29
RPUSD3-212ENST00000466141 SERPINB9P50453 376 aa7.02□□□□□ -1.29
RPUSD3-212ENST00000466141 NKX2-5P52952 324 aaPredicted RBP7.02□□□□□ -1.29
RPUSD3-212ENST00000466141 IL2P60568 153 aa7.02□□□□□ -1.29
RPUSD3-212ENST00000466141 ARF3P61204 181 aaPredicted RBP7.02□□□□□ -1.29
RPUSD3-212ENST00000466141 SUMO1P63165 101 aaKnown RBP7.02□□□□□ -1.29
RPUSD3-212ENST00000466141 RPS21P63220 83 aaKnown RBP7.02□□□□□ -1.29
RPUSD3-212ENST00000466141 ARF1P84077 181 aaKnown RBP7.02□□□□□ -1.29
RPUSD3-212ENST00000466141 BCL2L1Q07817 233 aa7.02□□□□□ -1.29
RPUSD3-212ENST00000466141 ELP6Q0PNE2 266 aa7.02□□□□□ -1.29
RPUSD3-212ENST00000466141 ART3Q13508 389 aa7.02□□□□□ -1.29
RPUSD3-212ENST00000466141 MPP2Q14168 576 aa7.02□□□□□ -1.29
RPUSD3-212ENST00000466141 LASP1Q14847 261 aaKnown RBP7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms