RNA–Protein interactions for RNA: ENST00000453543.5

CCDC117-206, Transcript of coiled-coil domain containing 117, humanhuman

TSL 2

Gene CCDC117, Length 1,026 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC117-206ENST00000453543 REXO4Q9GZR2 422 aaKnown RBP28.23■■■□□ 2.11
CCDC117-206ENST00000453543 ZNF358Q9NW07 568 aa28.23■■■□□ 2.11
CCDC117-206ENST00000453543 IKBKGQ9Y6K9 419 aa28.23■■■□□ 2.11
CCDC117-206ENST00000453543 A0A087WUV0 522 aaPredicted RBP28.22■■■□□ 2.11
CCDC117-206ENST00000453543 CCDC189A1A4V9 331 aa28.22■■■□□ 2.11
CCDC117-206ENST00000453543 LRRC14BA6NHZ5 514 aa28.22■■■□□ 2.11
CCDC117-206ENST00000453543 PSMD12O00232 456 aaPredicted RBP28.22■■■□□ 2.11
CCDC117-206ENST00000453543 GFAPP14136 432 aa28.22■■■□□ 2.11
CCDC117-206ENST00000453543 CASP2P42575 452 aa28.22■■■□□ 2.11
CCDC117-206ENST00000453543 SERPINB9P50453 376 aa28.22■■■□□ 2.11
CCDC117-206ENST00000453543 PLA2G16P53816 162 aa28.22■■■□□ 2.11
CCDC117-206ENST00000453543 OR4D2P58180 307 aa28.22■■■□□ 2.11
CCDC117-206ENST00000453543 AP2B1P63010 937 aa28.22■■■□□ 2.11
CCDC117-206ENST00000453543 LAPTM5Q13571 262 aa28.22■■■□□ 2.11
CCDC117-206ENST00000453543 RUNX2Q13950 521 aa28.22■■■□□ 2.11
CCDC117-206ENST00000453543 ZNF169Q14929 603 aaPredicted RBP28.22■■■□□ 2.11
CCDC117-206ENST00000453543 SETDB1Q15047 1291 aa28.22■■■□□ 2.11
CCDC117-206ENST00000453543 KLC3Q6P597 504 aa28.22■■■□□ 2.11
CCDC117-206ENST00000453543 TEX9Q8N6V9 391 aa28.22■■■□□ 2.11
CCDC117-206ENST00000453543 OR2L5Q8NG80 312 aa28.22■■■□□ 2.11
CCDC117-206ENST00000453543 PTCHD1Q96NR3 888 aa28.22■■■□□ 2.11
CCDC117-206ENST00000453543 QRFPRQ96P65 431 aa28.22■■■□□ 2.11
CCDC117-206ENST00000453543 LRRK2Q5S007 2527 aa28.22■■■□□ 2.11
CCDC117-206ENST00000453543 TCP11X1B4DZS4 312 aa28.21■■■□□ 2.11
CCDC117-206ENST00000453543 PRMT3O60678 531 aa28.21■■■□□ 2.11
CCDC117-206ENST00000453543 MAOAP21397 527 aa28.21■■■□□ 2.11
CCDC117-206ENST00000453543 MSH2P43246 934 aa28.21■■■□□ 2.11
CCDC117-206ENST00000453543 ARG2P78540 354 aa28.21■■■□□ 2.11
CCDC117-206ENST00000453543 SRSF1Q07955 248 aaKnown RBP eCLIP28.21■■■□□ 2.11
CCDC117-206ENST00000453543 ACTN3Q08043 901 aaPredicted RBP28.21■■■□□ 2.11
CCDC117-206ENST00000453543 NAA30Q147X3 362 aaPredicted RBP28.21■■■□□ 2.11
CCDC117-206ENST00000453543 TLR1Q15399 786 aa28.21■■■□□ 2.11
CCDC117-206ENST00000453543 TECRLQ5HYJ1 363 aa28.21■■■□□ 2.11
CCDC117-206ENST00000453543 QSOX2Q6ZRP7 698 aa28.21■■■□□ 2.11
CCDC117-206ENST00000453543 TAOK1Q7L7X3 1001 aa28.21■■■□□ 2.11
CCDC117-206ENST00000453543 CPSF2Q9P2I0 782 aaKnown RBP28.21■■■□□ 2.11
CCDC117-206ENST00000453543 HECTD1Q9ULT8 2610 aa28.2■■■□□ 2.1
CCDC117-206ENST00000453543 KLK8O60259 260 aa28.2■■■□□ 2.1
CCDC117-206ENST00000453543 F10P00742 488 aa28.2■■■□□ 2.1
CCDC117-206ENST00000453543 EPB42P16452 691 aa28.2■■■□□ 2.1
CCDC117-206ENST00000453543 ALDH18A1P54886 795 aaKnown RBP28.2■■■□□ 2.1
CCDC117-206ENST00000453543 EXT1Q16394 746 aa28.2■■■□□ 2.1
CCDC117-206ENST00000453543 HIST2H2ACQ16777 129 aaPredicted RBP28.2■■■□□ 2.1
CCDC117-206ENST00000453543 HIST2H2AA3Q6FI13 130 aa28.2■■■□□ 2.1
CCDC117-206ENST00000453543 TRIM40Q6P9F5 258 aa28.2■■■□□ 2.1
CCDC117-206ENST00000453543 MAGEB10Q96LZ2 347 aaPredicted RBP28.2■■■□□ 2.1
CCDC117-206ENST00000453543 F2RL3Q96RI0 385 aa28.2■■■□□ 2.1
CCDC117-206ENST00000453543 LPAR4Q99677 370 aa28.2■■■□□ 2.1
CCDC117-206ENST00000453543 NECTIN3Q9NQS3 549 aa28.2■■■□□ 2.1
CCDC117-206ENST00000453543 ZNF180Q9UJW8 692 aa28.2■■■□□ 2.1
CCDC117-206ENST00000453543 COPG1Q9Y678 874 aaKnown RBP28.2■■■□□ 2.1
CCDC117-206ENST00000453543 DYTNA2CJ06 578 aa28.19■■■□□ 2.1
CCDC117-206ENST00000453543 CLEC18AA5D8T8 446 aa28.19■■■□□ 2.1
CCDC117-206ENST00000453543 A8MUI8 341 aa28.19■■■□□ 2.1
CCDC117-206ENST00000453543 KRT38O76015 456 aa28.19■■■□□ 2.1
CCDC117-206ENST00000453543 PCDH1Q08174 1060 aa28.19■■■□□ 2.1
CCDC117-206ENST00000453543 MRPL49Q13405 166 aaKnown RBP28.19■■■□□ 2.1
CCDC117-206ENST00000453543 FCRLBQ6BAA4 426 aa28.19■■■□□ 2.1
CCDC117-206ENST00000453543 MED27Q6P2C8 311 aa28.19■■■□□ 2.1
CCDC117-206ENST00000453543 ABHD17CQ6PCB6 329 aa28.19■■■□□ 2.1
CCDC117-206ENST00000453543 CLEC18BQ6UXF7 455 aa28.19■■■□□ 2.1
CCDC117-206ENST00000453543 CLEC18CQ8NCF0 446 aa28.19■■■□□ 2.1
CCDC117-206ENST00000453543 SLC29A3Q9BZD2 475 aa28.19■■■□□ 2.1
CCDC117-206ENST00000453543 PRDM9Q9NQV7 894 aa28.19■■■□□ 2.1
CCDC117-206ENST00000453543 ANGPTL3Q9Y5C1 460 aa28.19■■■□□ 2.1
CCDC117-206ENST00000453543 USP9XQ93008 2570 aaPredicted RBP28.18■■■□□ 2.1
CCDC117-206ENST00000453543 IGKV3D-11A0A0A0MRZ8 115 aa28.18■■■□□ 2.1
CCDC117-206ENST00000453543 TRIM49D1C9J1S8 452 aa28.18■■■□□ 2.1
CCDC117-206ENST00000453543 B3GALT2O43825 422 aa28.18■■■□□ 2.1
CCDC117-206ENST00000453543 FAM153BP0C7A2 387 aa28.18■■■□□ 2.1
CCDC117-206ENST00000453543 PCNAP12004 261 aa28.18■■■□□ 2.1
CCDC117-206ENST00000453543 CERS1P27544 350 aa28.18■■■□□ 2.1
CCDC117-206ENST00000453543 HPDP32754 393 aaPredicted RBP28.18■■■□□ 2.1
CCDC117-206ENST00000453543 TSFMP43897 325 aaKnown RBP28.18■■■□□ 2.1
CCDC117-206ENST00000453543 SLC26A5P58743 744 aa28.18■■■□□ 2.1
CCDC117-206ENST00000453543 ZNF33BQ06732 778 aa28.18■■■□□ 2.1
CCDC117-206ENST00000453543 FAM153CQ494X1 144 aa28.18■■■□□ 2.1
CCDC117-206ENST00000453543 ABHD17BQ5VST6 288 aa28.18■■■□□ 2.1
CCDC117-206ENST00000453543 LAS2Q8IYD9 372 aa28.18■■■□□ 2.1
CCDC117-206ENST00000453543 CYP4X1Q8N118 509 aa28.18■■■□□ 2.1
CCDC117-206ENST00000453543 M1APQ8TC57 530 aa28.18■■■□□ 2.1
CCDC117-206ENST00000453543 ZNF473Q8WTR7 871 aaKnown RBP28.18■■■□□ 2.1
CCDC117-206ENST00000453543 HAS2Q92819 552 aa28.18■■■□□ 2.1
CCDC117-206ENST00000453543 NPLQ9BXD5 320 aaPredicted RBP28.18■■■□□ 2.1
CCDC117-206ENST00000453543 MS4A8Q9BY19 250 aa28.18■■■□□ 2.1
CCDC117-206ENST00000453543 KCNK13Q9HB14 408 aa28.18■■■□□ 2.1
CCDC117-206ENST00000453543 MMP25Q9NPA2 562 aa28.18■■■□□ 2.1
CCDC117-206ENST00000453543 PTPN13Q12923 2485 aa28.17■■■□□ 2.1
CCDC117-206ENST00000453543 A0A088AWK7 358 aa28.17■■■□□ 2.1
CCDC117-206ENST00000453543 EXOC1LA0A1B0GW35 172 aa28.17■■■□□ 2.1
CCDC117-206ENST00000453543 SIX3O95343 332 aaPredicted RBP28.17■■■□□ 2.1
CCDC117-206ENST00000453543 WDPCPO95876 746 aa28.17■■■□□ 2.1
CCDC117-206ENST00000453543 ABHD2P08910 425 aa28.17■■■□□ 2.1
CCDC117-206ENST00000453543 ZNF10P21506 573 aaPredicted RBP28.17■■■□□ 2.1
CCDC117-206ENST00000453543 CNTFP26441 200 aa28.17■■■□□ 2.1
CCDC117-206ENST00000453543 TNFSF10P50591 281 aa28.17■■■□□ 2.1
CCDC117-206ENST00000453543 UBAP2LQ14157 1087 aaKnown RBP28.17■■■□□ 2.1
CCDC117-206ENST00000453543 GRHL2Q6ISB3 625 aa28.17■■■□□ 2.1
CCDC117-206ENST00000453543 H3F3CQ6NXT2 135 aa28.17■■■□□ 2.1
CCDC117-206ENST00000453543 UBE3DQ7Z6J8 389 aa28.17■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms