RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 CYP2J2P51589 502 aa4.18□□□□□ -1.74
HMGB3P21-201ENST00000452483 RABGGTBP53611 331 aa4.18□□□□□ -1.74
HMGB3P21-201ENST00000452483 SUMO2P61956 95 aaKnown RBP4.18□□□□□ -1.74
HMGB3P21-201ENST00000452483 CFHR1Q03591 330 aa4.18□□□□□ -1.74
HMGB3P21-201ENST00000452483 LRRC63Q05C16 580 aa4.18□□□□□ -1.74
HMGB3P21-201ENST00000452483 STIM1Q13586 685 aa4.18□□□□□ -1.74
HMGB3P21-201ENST00000452483 CUL3Q13618 768 aa4.18□□□□□ -1.74
HMGB3P21-201ENST00000452483 MELKQ14680 651 aa4.18□□□□□ -1.74
HMGB3P21-201ENST00000452483 NR1D2Q14995 579 aa4.18□□□□□ -1.74
HMGB3P21-201ENST00000452483 P2RY14Q15391 338 aa4.18□□□□□ -1.74
HMGB3P21-201ENST00000452483 MAPRE2Q15555 327 aa4.18□□□□□ -1.74
HMGB3P21-201ENST00000452483 TPSAB1Q15661 275 aa4.18□□□□□ -1.74
HMGB3P21-201ENST00000452483 MEP1AQ16819 746 aa4.18□□□□□ -1.74
HMGB3P21-201ENST00000452483 CD300EQ496F6 205 aaPredicted RBP4.18□□□□□ -1.74
HMGB3P21-201ENST00000452483 CTSL3PQ5NE16 218 aa4.18□□□□□ -1.74
HMGB3P21-201ENST00000452483 HHATQ5VTY9 493 aa4.18□□□□□ -1.74
HMGB3P21-201ENST00000452483 ALS2CLQ60I27 953 aa4.18□□□□□ -1.74
HMGB3P21-201ENST00000452483 TMEM225Q6GV28 225 aa4.18□□□□□ -1.74
HMGB3P21-201ENST00000452483 ARMC6Q6NXE6 501 aa4.18□□□□□ -1.74
HMGB3P21-201ENST00000452483 PPP1R2P3Q6NXS1 205 aa4.18□□□□□ -1.74
HMGB3P21-201ENST00000452483 FBXO42Q6P3S6 717 aa4.18□□□□□ -1.74
HMGB3P21-201ENST00000452483 RNASEKQ6P5S7 137 aaKnown RBP4.18□□□□□ -1.74
HMGB3P21-201ENST00000452483 FOXR2Q6PJQ5 311 aa4.18□□□□□ -1.74
HMGB3P21-201ENST00000452483 SASS6Q6UVJ0 657 aa4.18□□□□□ -1.74
HMGB3P21-201ENST00000452483 CD164L2Q6UWJ8 174 aa4.18□□□□□ -1.74
HMGB3P21-201ENST00000452483 LEKR1Q6ZMV7 388 aa4.18□□□□□ -1.74
HMGB3P21-201ENST00000452483 RNF207Q6ZRF8 634 aa4.18□□□□□ -1.74
HMGB3P21-201ENST00000452483 COPS6Q7L5N1 327 aa4.18□□□□□ -1.74
HMGB3P21-201ENST00000452483 SPRED1Q7Z699 444 aa4.18□□□□□ -1.74
HMGB3P21-201ENST00000452483 CLNKQ7Z7G1 428 aa4.18□□□□□ -1.74
HMGB3P21-201ENST00000452483 PLCZ1Q86YW0 608 aa4.18□□□□□ -1.74
HMGB3P21-201ENST00000452483 KLBQ86Z14 1044 aa4.18□□□□□ -1.74
HMGB3P21-201ENST00000452483 CCDC36Q8IYA8 594 aa4.18□□□□□ -1.74
HMGB3P21-201ENST00000452483 LRRC34Q8IZ02 419 aa4.18□□□□□ -1.74
HMGB3P21-201ENST00000452483 ICA1LQ8NDH6 482 aa4.18□□□□□ -1.74
HMGB3P21-201ENST00000452483 OR14K1Q8NGZ2 314 aa4.18□□□□□ -1.74
HMGB3P21-201ENST00000452483 HM13Q8TCT9 377 aa4.18□□□□□ -1.74
HMGB3P21-201ENST00000452483 DTX3LQ8TDB6 740 aa4.18□□□□□ -1.74
HMGB3P21-201ENST00000452483 SEPT8Q92599 483 aa4.18□□□□□ -1.74
HMGB3P21-201ENST00000452483 MCHR2Q969V1 340 aa4.18□□□□□ -1.74
HMGB3P21-201ENST00000452483 RFT1Q96AA3 541 aa4.18□□□□□ -1.74
HMGB3P21-201ENST00000452483 PINX1Q96BK5 328 aaKnown RBP4.18□□□□□ -1.74
HMGB3P21-201ENST00000452483 COQ8BQ96D53 544 aa4.18□□□□□ -1.74
HMGB3P21-201ENST00000452483 R3HDM4Q96D70 268 aa4.18□□□□□ -1.74
HMGB3P21-201ENST00000452483 TECTBQ96PL2 329 aa4.18□□□□□ -1.74
HMGB3P21-201ENST00000452483 ZNF317Q96PQ6 595 aaPredicted RBP4.18□□□□□ -1.74
HMGB3P21-201ENST00000452483 DUX5Q96PT3 197 aa4.18□□□□□ -1.74
HMGB3P21-201ENST00000452483 CRAMP1Q96RY5 1269 aa4.18□□□□□ -1.74
HMGB3P21-201ENST00000452483 KRT12Q99456 494 aa4.18□□□□□ -1.74
HMGB3P21-201ENST00000452483 CENPKQ9BS16 269 aa4.18□□□□□ -1.74
HMGB3P21-201ENST00000452483 CNPY3Q9BT09 278 aa4.18□□□□□ -1.74
HMGB3P21-201ENST00000452483 WRAP53Q9BUR4 548 aaKnown RBP4.18□□□□□ -1.74
HMGB3P21-201ENST00000452483 GSDMCQ9BYG8 508 aa4.18□□□□□ -1.74
HMGB3P21-201ENST00000452483 KRTAP3-1Q9BYR8 98 aa4.18□□□□□ -1.74
HMGB3P21-201ENST00000452483 PRRG3Q9BZD7 231 aa4.18□□□□□ -1.74
HMGB3P21-201ENST00000452483 UPF3BQ9BZI7 483 aaKnown RBP4.18□□□□□ -1.74
HMGB3P21-201ENST00000452483 STRADBQ9C0K7 418 aa4.18□□□□□ -1.74
HMGB3P21-201ENST00000452483 OR10A2Q9H208 303 aa4.18□□□□□ -1.74
HMGB3P21-201ENST00000452483 OR52A5Q9H2C5 316 aa4.18□□□□□ -1.74
HMGB3P21-201ENST00000452483 MTIF3Q9H2K0 278 aaKnown RBP4.18□□□□□ -1.74
HMGB3P21-201ENST00000452483 GAL3ST2Q9H3Q3 398 aa4.18□□□□□ -1.74
HMGB3P21-201ENST00000452483 DPEP3Q9H4B8 488 aa4.18□□□□□ -1.74
HMGB3P21-201ENST00000452483 SEC61A2Q9H9S3 476 aa4.18□□□□□ -1.74
HMGB3P21-201ENST00000452483 DNAJC4Q9NNZ3 241 aa4.18□□□□□ -1.74
HMGB3P21-201ENST00000452483 IL23AQ9NPF7 189 aa4.18□□□□□ -1.74
HMGB3P21-201ENST00000452483 GPR173Q9NS66 373 aa4.18□□□□□ -1.74
HMGB3P21-201ENST00000452483 ZDHHC18Q9NUE0 388 aa4.18□□□□□ -1.74
HMGB3P21-201ENST00000452483 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.18□□□□□ -1.74
HMGB3P21-201ENST00000452483 SLC39A1Q9NY26 324 aa4.18□□□□□ -1.74
HMGB3P21-201ENST00000452483 MTCH1Q9NZJ7 389 aa4.18□□□□□ -1.74
HMGB3P21-201ENST00000452483 HSFX1Q9UBD0 423 aa4.18□□□□□ -1.74
HMGB3P21-201ENST00000452483 OR14J1Q9UGF5 321 aa4.18□□□□□ -1.74
HMGB3P21-201ENST00000452483 NARFQ9UHQ1 456 aa4.18□□□□□ -1.74
HMGB3P21-201ENST00000452483 ST6GALNAC2Q9UJ37 374 aa4.18□□□□□ -1.74
HMGB3P21-201ENST00000452483 ADAM28Q9UKQ2 775 aa4.18□□□□□ -1.74
HMGB3P21-201ENST00000452483 ABT1Q9ULW3 272 aaKnown RBP4.18□□□□□ -1.74
HMGB3P21-201ENST00000452483 TNNQ9UQP3 1299 aa4.18□□□□□ -1.74
HMGB3P21-201ENST00000452483 ATG4BQ9Y4P1 393 aa4.18□□□□□ -1.74
HMGB3P21-201ENST00000452483 A0A1B0GUH1 482 aa4.17□□□□□ -1.74
HMGB3P21-201ENST00000452483 SMCO3A2RU48 225 aa4.17□□□□□ -1.74
HMGB3P21-201ENST00000452483 CCDC162PA2VCL2 907 aa4.17□□□□□ -1.74
HMGB3P21-201ENST00000452483 FAM157AC9JC47 383 aa4.17□□□□□ -1.74
HMGB3P21-201ENST00000452483 E7ENQ6 273 aa4.17□□□□□ -1.74
HMGB3P21-201ENST00000452483 GOLGA8MH3BSY2 632 aa4.17□□□□□ -1.74
HMGB3P21-201ENST00000452483 SDHDO14521 159 aa4.17□□□□□ -1.74
HMGB3P21-201ENST00000452483 SCAMP2O15127 329 aaKnown RBP4.17□□□□□ -1.74
HMGB3P21-201ENST00000452483 SLC16A5O15375 505 aa4.17□□□□□ -1.74
HMGB3P21-201ENST00000452483 TMPRSS11DO60235 418 aa4.17□□□□□ -1.74
HMGB3P21-201ENST00000452483 UPK3AO75631 287 aa4.17□□□□□ -1.74
HMGB3P21-201ENST00000452483 CABYRO75952 493 aa4.17□□□□□ -1.74
HMGB3P21-201ENST00000452483 TOP3BO95985 862 aaKnown RBP4.17□□□□□ -1.74
HMGB3P21-201ENST00000452483 CSN3P07498 182 aa4.17□□□□□ -1.74
HMGB3P21-201ENST00000452483 CD63P08962 238 aa4.17□□□□□ -1.74
HMGB3P21-201ENST00000452483 ACAA1P09110 424 aaPredicted RBP4.17□□□□□ -1.74
HMGB3P21-201ENST00000452483 OR2T7P0C7T2 308 aa4.17□□□□□ -1.74
HMGB3P21-201ENST00000452483 NT5EP21589 574 aa4.17□□□□□ -1.74
HMGB3P21-201ENST00000452483 NDUFS1P28331 727 aa4.17□□□□□ -1.74
HMGB3P21-201ENST00000452483 CD40LGP29965 261 aa4.17□□□□□ -1.74
HMGB3P21-201ENST00000452483 TNFRSF4P43489 277 aa4.17□□□□□ -1.74
HMGB3P21-201ENST00000452483 OR3A1P47881 315 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms