RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 SLC6A9P48067 706 aa7.52□□□□□ -1.21
NEDD9-204ENST00000448183 KCNQ1P51787 676 aa7.52□□□□□ -1.21
NEDD9-204ENST00000448183 SLC25A25Q6KCM7 469 aa7.52□□□□□ -1.21
NEDD9-204ENST00000448183 TMEM53Q6P2H8 277 aa7.52□□□□□ -1.21
NEDD9-204ENST00000448183 HACD2Q6Y1H2 254 aa7.52□□□□□ -1.21
NEDD9-204ENST00000448183 CYS1Q717R9 158 aa7.52□□□□□ -1.21
NEDD9-204ENST00000448183 GID4Q8IVV7 300 aa7.52□□□□□ -1.21
NEDD9-204ENST00000448183 HDDC3Q8N4P3 179 aa7.52□□□□□ -1.21
NEDD9-204ENST00000448183 DENND6BQ8NEG7 585 aa7.52□□□□□ -1.21
NEDD9-204ENST00000448183 RPLP0P6Q8NHW5 317 aa7.52□□□□□ -1.21
NEDD9-204ENST00000448183 GNPDA2Q8TDQ7 276 aa7.52□□□□□ -1.21
NEDD9-204ENST00000448183 ASB12Q8WXK4 309 aa7.52□□□□□ -1.21
NEDD9-204ENST00000448183 SGCDQ92629 289 aa7.52□□□□□ -1.21
NEDD9-204ENST00000448183 KLK6Q92876 244 aa7.52□□□□□ -1.21
NEDD9-204ENST00000448183 ITPKCQ96DU7 683 aa7.52□□□□□ -1.21
NEDD9-204ENST00000448183 JSRP1Q96MG2 331 aaPredicted RBP7.52□□□□□ -1.21
NEDD9-204ENST00000448183 CARS2Q9HA77 564 aaKnown RBP7.52□□□□□ -1.21
NEDD9-204ENST00000448183 CUEDC1Q9NWM3 386 aaPredicted RBP7.52□□□□□ -1.21
NEDD9-204ENST00000448183 C14orf119Q9NWQ9 140 aa7.52□□□□□ -1.21
NEDD9-204ENST00000448183 C14orf166Q9Y224 244 aaKnown RBP7.52□□□□□ -1.21
NEDD9-204ENST00000448183 A0A0J9YVX5 310 aa7.51□□□□□ -1.21
NEDD9-204ENST00000448183 VILLO15195 856 aa7.51□□□□□ -1.21
NEDD9-204ENST00000448183 PRAMEF11O60813 436 aa7.51□□□□□ -1.21
NEDD9-204ENST00000448183 AOC2O75106 756 aa7.51□□□□□ -1.21
NEDD9-204ENST00000448183 NR2C1P13056 603 aa7.51□□□□□ -1.21
NEDD9-204ENST00000448183 KCNE1P15382 129 aa7.51□□□□□ -1.21
NEDD9-204ENST00000448183 HOXC12P31275 282 aa7.51□□□□□ -1.21
NEDD9-204ENST00000448183 OR1E2P47887 323 aa7.51□□□□□ -1.21
NEDD9-204ENST00000448183 LEPRP48357 1165 aaKnown RBP7.51□□□□□ -1.21
NEDD9-204ENST00000448183 ATXN7L3Q14CW9 347 aaPredicted RBP7.51□□□□□ -1.21
NEDD9-204ENST00000448183 RHEBQ15382 184 aa7.51□□□□□ -1.21
NEDD9-204ENST00000448183 EIF2S3LQ2VIR3 472 aaKnown RBP7.51□□□□□ -1.21
NEDD9-204ENST00000448183 ALG10Q5BKT4 473 aa7.51□□□□□ -1.21
NEDD9-204ENST00000448183 SLC27A4Q6P1M0 643 aa7.51□□□□□ -1.21
NEDD9-204ENST00000448183 ANKRD13BQ86YJ7 626 aa7.51□□□□□ -1.21
NEDD9-204ENST00000448183 RBM12BQ8IXT5 1001 aaKnown RBP7.51□□□□□ -1.21
NEDD9-204ENST00000448183 POGLUT1Q8NBL1 392 aa7.51□□□□□ -1.21
NEDD9-204ENST00000448183 OR4K1Q8NGD4 311 aa7.51□□□□□ -1.21
NEDD9-204ENST00000448183 OR51G2Q8NGK0 314 aa7.51□□□□□ -1.21
NEDD9-204ENST00000448183 OR8J1Q8NGP2 316 aa7.51□□□□□ -1.21
NEDD9-204ENST00000448183 SMPDL3BQ92485 455 aa7.51□□□□□ -1.21
NEDD9-204ENST00000448183 PEX13Q92968 403 aa7.51□□□□□ -1.21
NEDD9-204ENST00000448183 RELTQ969Z4 430 aa7.51□□□□□ -1.21
NEDD9-204ENST00000448183 TSGA13Q96PP4 275 aa7.51□□□□□ -1.21
NEDD9-204ENST00000448183 MCHR1Q99705 422 aa7.51□□□□□ -1.21
NEDD9-204ENST00000448183 SPATA9Q9BWV2 254 aa7.51□□□□□ -1.21
NEDD9-204ENST00000448183 ZNF717Q9BY31 904 aaPredicted RBP7.51□□□□□ -1.21
NEDD9-204ENST00000448183 TMEM168Q9H0V1 697 aa7.51□□□□□ -1.21
NEDD9-204ENST00000448183 RNF39Q9H2S5 420 aa7.51□□□□□ -1.21
NEDD9-204ENST00000448183 ADAM7Q9H2U9 754 aa7.51□□□□□ -1.21
NEDD9-204ENST00000448183 REEP4Q9H6H4 257 aa7.51□□□□□ -1.21
NEDD9-204ENST00000448183 AIG1Q9NVV5 245 aa7.51□□□□□ -1.21
NEDD9-204ENST00000448183 IL36AQ9UHA7 158 aa7.51□□□□□ -1.21
NEDD9-204ENST00000448183 MRC1P22897 1456 aa7.51□□□□□ -1.21
NEDD9-204ENST00000448183 SLC35F4A4IF30 521 aa7.51□□□□□ -1.21
NEDD9-204ENST00000448183 GBAP04062 536 aa7.51□□□□□ -1.21
NEDD9-204ENST00000448183 PORP16435 677 aaPredicted RBP7.51□□□□□ -1.21
NEDD9-204ENST00000448183 ZNF8P17098 575 aaPredicted RBP7.51□□□□□ -1.21
NEDD9-204ENST00000448183 CD97P48960 835 aa7.51□□□□□ -1.21
NEDD9-204ENST00000448183 FNTBP49356 437 aa7.51□□□□□ -1.21
NEDD9-204ENST00000448183 AGTR2P50052 363 aa7.51□□□□□ -1.21
NEDD9-204ENST00000448183 GABARAPL2P60520 117 aa7.51□□□□□ -1.21
NEDD9-204ENST00000448183 SP2Q02086 613 aa7.51□□□□□ -1.21
NEDD9-204ENST00000448183 PIGFQ07326 219 aa7.51□□□□□ -1.21
NEDD9-204ENST00000448183 KCNC3Q14003 757 aa7.51□□□□□ -1.21
NEDD9-204ENST00000448183 LIPKQ5VXJ0 399 aa7.51□□□□□ -1.21
NEDD9-204ENST00000448183 CDCA2Q69YH5 1023 aaPredicted RBP7.51□□□□□ -1.21
NEDD9-204ENST00000448183 NOXRED1Q6NXP6 359 aa7.51□□□□□ -1.21
NEDD9-204ENST00000448183 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.51□□□□□ -1.21
NEDD9-204ENST00000448183 ELMOD2Q8IZ81 293 aa7.51□□□□□ -1.21
NEDD9-204ENST00000448183 Q8N402 240 aa7.51□□□□□ -1.21
NEDD9-204ENST00000448183 ZNF384Q8TF68 577 aa7.51□□□□□ -1.21
NEDD9-204ENST00000448183 CASTOR1Q8WTX7 329 aa7.51□□□□□ -1.21
NEDD9-204ENST00000448183 SCRN2Q96FV2 425 aa7.51□□□□□ -1.21
NEDD9-204ENST00000448183 MSANTD3Q96H12 275 aa7.51□□□□□ -1.21
NEDD9-204ENST00000448183 DGAT2Q96PD7 388 aa7.51□□□□□ -1.21
NEDD9-204ENST00000448183 SMOQ99835 787 aa7.51□□□□□ -1.21
NEDD9-204ENST00000448183 DOHHQ9BU89 302 aa7.51□□□□□ -1.21
NEDD9-204ENST00000448183 MEAF6Q9HAF1 191 aa7.51□□□□□ -1.21
NEDD9-204ENST00000448183 TMEM248Q9NWD8 314 aa7.51□□□□□ -1.21
NEDD9-204ENST00000448183 PAQR5Q9NXK6 330 aaPredicted RBP7.51□□□□□ -1.21
NEDD9-204ENST00000448183 CDC14AQ9UNH5 594 aa7.51□□□□□ -1.21
NEDD9-204ENST00000448183 ERVK-11Q9UQG0 969 aa7.51□□□□□ -1.21
NEDD9-204ENST00000448183 PLEKHA6Q9Y2H5 1048 aa7.51□□□□□ -1.21
NEDD9-204ENST00000448183 YIPF1Q9Y548 306 aa7.51□□□□□ -1.21
NEDD9-204ENST00000448183 MED1Q15648 1581 aaPredicted RBP7.51□□□□□ -1.21
NEDD9-204ENST00000448183 ZNF142P52746 1687 aaPredicted RBP7.51□□□□□ -1.21
NEDD9-204ENST00000448183 FAAHO00519 579 aa7.51□□□□□ -1.21
NEDD9-204ENST00000448183 SCDO00767 359 aa7.51□□□□□ -1.21
NEDD9-204ENST00000448183 KDELR3O43731 214 aa7.51□□□□□ -1.21
NEDD9-204ENST00000448183 PCDHGA12O60330 932 aa7.51□□□□□ -1.21
NEDD9-204ENST00000448183 RFPL2O75678 378 aa7.51□□□□□ -1.21
NEDD9-204ENST00000448183 CNTN5O94779 1100 aa7.51□□□□□ -1.21
NEDD9-204ENST00000448183 OAZ2O95190 189 aa7.51□□□□□ -1.21
NEDD9-204ENST00000448183 IL3P08700 152 aa7.51□□□□□ -1.21
NEDD9-204ENST00000448183 FADDQ13158 208 aa7.51□□□□□ -1.21
NEDD9-204ENST00000448183 GRB7Q14451 532 aa7.51□□□□□ -1.21
NEDD9-204ENST00000448183 TRAM1Q15629 374 aa7.51□□□□□ -1.21
NEDD9-204ENST00000448183 OCLNQ16625 522 aa7.51□□□□□ -1.21
NEDD9-204ENST00000448183 MS4A13Q5J8X5 152 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms