RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 TOR1AIP1Q5JTV8 583 aa13.4□□□□□ -0.26
VPS52-212ENST00000445902 MON1AQ86VX9 555 aa13.4□□□□□ -0.26
VPS52-212ENST00000445902 KATNAL1Q9BW62 490 aa13.4□□□□□ -0.26
VPS52-212ENST00000445902 GPR63Q9BZJ6 419 aa13.4□□□□□ -0.26
VPS52-212ENST00000445902 NIPAL2Q9H841 368 aa13.4□□□□□ -0.26
VPS52-212ENST00000445902 PIM2Q9P1W9 311 aa13.4□□□□□ -0.26
VPS52-212ENST00000445902 SEC14L4Q9UDX3 406 aa13.4□□□□□ -0.26
VPS52-212ENST00000445902 IQCMA0A1B0GVH7 501 aa13.39□□□□□ -0.27
VPS52-212ENST00000445902 SCN2BO60939 215 aa13.39□□□□□ -0.27
VPS52-212ENST00000445902 PDE9AO76083 593 aa13.39□□□□□ -0.27
VPS52-212ENST00000445902 SELENOWP63302 87 aa13.39□□□□□ -0.27
VPS52-212ENST00000445902 UAP1L1Q3KQV9 507 aa13.39□□□□□ -0.27
VPS52-212ENST00000445902 COX20Q5RI15 118 aa13.39□□□□□ -0.27
VPS52-212ENST00000445902 DDI2Q5TDH0 399 aa13.39□□□□□ -0.27
VPS52-212ENST00000445902 CCSAPQ6IQ19 270 aaPredicted RBP13.39□□□□□ -0.27
VPS52-212ENST00000445902 ADGRG2Q8IZP9 1017 aa13.39□□□□□ -0.27
VPS52-212ENST00000445902 Q8N402 240 aa13.39□□□□□ -0.27
VPS52-212ENST00000445902 ESX1Q8N693 406 aa13.39□□□□□ -0.27
VPS52-212ENST00000445902 OR4C15Q8NGM1 316 aa13.39□□□□□ -0.27
VPS52-212ENST00000445902 BTN2A2Q8WVV5 523 aa13.39□□□□□ -0.27
VPS52-212ENST00000445902 SLC25A46Q96AG3 418 aa13.39□□□□□ -0.27
VPS52-212ENST00000445902 TXNL4BQ9NX01 149 aaKnown RBP13.39□□□□□ -0.27
VPS52-212ENST00000445902 TMCC3Q9ULS5 477 aa13.39□□□□□ -0.27
VPS52-212ENST00000445902 ST3GAL5Q9UNP4 418 aa13.39□□□□□ -0.27
VPS52-212ENST00000445902 MAPRE3Q9UPY8 281 aa13.39□□□□□ -0.27
VPS52-212ENST00000445902 HYKKA2RU49 373 aa13.39□□□□□ -0.27
VPS52-212ENST00000445902 SLC35F4A4IF30 521 aa13.39□□□□□ -0.27
VPS52-212ENST00000445902 MYL12BO14950 172 aa13.39□□□□□ -0.27
VPS52-212ENST00000445902 PLOD3O60568 738 aa13.39□□□□□ -0.27
VPS52-212ENST00000445902 PSIP1O75475 530 aaKnown RBP13.39□□□□□ -0.27
VPS52-212ENST00000445902 PRAMEF1O95521 474 aa13.39□□□□□ -0.27
VPS52-212ENST00000445902 GASTP01350 101 aa13.39□□□□□ -0.27
VPS52-212ENST00000445902 ETFAP13804 333 aa13.39□□□□□ -0.27
VPS52-212ENST00000445902 AMD1P17707 334 aa13.39□□□□□ -0.27
VPS52-212ENST00000445902 MYL12AP19105 171 aa13.39□□□□□ -0.27
VPS52-212ENST00000445902 ITPKAP23677 461 aa13.39□□□□□ -0.27
VPS52-212ENST00000445902 RPS24P62847 133 aaKnown RBP13.39□□□□□ -0.27
VPS52-212ENST00000445902 SPDYE7PQ495Y7 208 aa13.39□□□□□ -0.27
VPS52-212ENST00000445902 ZNF852Q6ZMS4 543 aa13.39□□□□□ -0.27
VPS52-212ENST00000445902 PDZD3Q86UT5 571 aa13.39□□□□□ -0.27
VPS52-212ENST00000445902 GDPD1Q8N9F7 314 aa13.39□□□□□ -0.27
VPS52-212ENST00000445902 SLC37A3Q8NCC5 494 aa13.39□□□□□ -0.27
VPS52-212ENST00000445902 QRFPRQ96P65 431 aa13.39□□□□□ -0.27
VPS52-212ENST00000445902 PSKH2Q96QS6 385 aa13.39□□□□□ -0.27
VPS52-212ENST00000445902 C17orf62Q9BQA9 187 aa13.39□□□□□ -0.27
VPS52-212ENST00000445902 TMEM121BQ9BXQ6 578 aaPredicted RBP13.39□□□□□ -0.27
VPS52-212ENST00000445902 B3GAT2Q9NPZ5 323 aa13.39□□□□□ -0.27
VPS52-212ENST00000445902 LSM2Q9Y333 95 aaKnown RBP13.39□□□□□ -0.27
VPS52-212ENST00000445902 PCDHB9Q9Y5E1 797 aa13.39□□□□□ -0.27
VPS52-212ENST00000445902 SNX11Q9Y5W9 270 aa13.39□□□□□ -0.27
VPS52-212ENST00000445902 TSPAN4O14817 238 aa13.38□□□□□ -0.27
VPS52-212ENST00000445902 ARSBP15848 533 aa13.38□□□□□ -0.27
VPS52-212ENST00000445902 TNNI3P19429 210 aa13.38□□□□□ -0.27
VPS52-212ENST00000445902 YBEYP58557 167 aaPredicted RBP13.38□□□□□ -0.27
VPS52-212ENST00000445902 BEX3Q00994 111 aa13.38□□□□□ -0.27
VPS52-212ENST00000445902 SEMG2Q02383 582 aa13.38□□□□□ -0.27
VPS52-212ENST00000445902 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.38□□□□□ -0.27
VPS52-212ENST00000445902 ZXDCQ2QGD7 858 aaPredicted RBP13.38□□□□□ -0.27
VPS52-212ENST00000445902 LIX1LQ8IVB5 337 aa13.38□□□□□ -0.27
VPS52-212ENST00000445902 PHC2Q8IXK0 858 aa13.38□□□□□ -0.27
VPS52-212ENST00000445902 THEM5Q8N1Q8 247 aa13.38□□□□□ -0.27
VPS52-212ENST00000445902 CELF5Q8N6W0 485 aaKnown RBP13.38□□□□□ -0.27
VPS52-212ENST00000445902 SLC43A3Q8NBI5 491 aa13.38□□□□□ -0.27
VPS52-212ENST00000445902 MTERF1Q99551 399 aaKnown RBP13.38□□□□□ -0.27
VPS52-212ENST00000445902 SPATA9Q9BWV2 254 aa13.38□□□□□ -0.27
VPS52-212ENST00000445902 C1QTNF7Q9BXJ2 289 aa13.38□□□□□ -0.27
VPS52-212ENST00000445902 PCDHB11Q9Y5F2 797 aa13.38□□□□□ -0.27
VPS52-212ENST00000445902 TDRD15B5MCY1 1934 aaKnown RBP13.38□□□□□ -0.27
VPS52-212ENST00000445902 FABP7O15540 132 aa13.38□□□□□ -0.27
VPS52-212ENST00000445902 TPST2O60704 377 aa13.38□□□□□ -0.27
VPS52-212ENST00000445902 GSTM1P09488 218 aa13.38□□□□□ -0.27
VPS52-212ENST00000445902 ZNF865P0CJ78 1059 aaPredicted RBP13.38□□□□□ -0.27
VPS52-212ENST00000445902 DGKAP23743 735 aa13.38□□□□□ -0.27
VPS52-212ENST00000445902 SOX9P48436 509 aa13.38□□□□□ -0.27
VPS52-212ENST00000445902 PXNP49023 591 aaPredicted RBP13.38□□□□□ -0.27
VPS52-212ENST00000445902 RRAS2P62070 204 aaPredicted RBP13.38□□□□□ -0.27
VPS52-212ENST00000445902 CACNG1Q06432 222 aa13.38□□□□□ -0.27
VPS52-212ENST00000445902 MAB21L1Q13394 359 aa13.38□□□□□ -0.27
VPS52-212ENST00000445902 VEZF1Q14119 521 aa13.38□□□□□ -0.27
VPS52-212ENST00000445902 RGNQ15493 299 aa13.38□□□□□ -0.27
VPS52-212ENST00000445902 MPPE1Q53F39 396 aa13.38□□□□□ -0.27
VPS52-212ENST00000445902 STK40Q8N2I9 435 aa13.38□□□□□ -0.27
VPS52-212ENST00000445902 C9orf62Q8N4C0 152 aa13.38□□□□□ -0.27
VPS52-212ENST00000445902 ZBTB2Q8N680 514 aa13.38□□□□□ -0.27
VPS52-212ENST00000445902 OR6K2Q8NGY2 324 aa13.38□□□□□ -0.27
VPS52-212ENST00000445902 CMTM7Q96FZ5 175 aa13.38□□□□□ -0.27
VPS52-212ENST00000445902 ASB8Q9H765 288 aa13.38□□□□□ -0.27
VPS52-212ENST00000445902 CNOT2Q9NZN8 540 aaKnown RBP13.38□□□□□ -0.27
VPS52-212ENST00000445902 RABL2AQ9UBK7 228 aaPredicted RBP13.38□□□□□ -0.27
VPS52-212ENST00000445902 MYO10Q9HD67 2058 aa13.38□□□□□ -0.27
VPS52-212ENST00000445902 PRPS1L1P21108 318 aa13.38□□□□□ -0.27
VPS52-212ENST00000445902 TACR2P21452 398 aa13.38□□□□□ -0.27
VPS52-212ENST00000445902 SDHBP21912 280 aa13.38□□□□□ -0.27
VPS52-212ENST00000445902 CD9P21926 228 aa13.38□□□□□ -0.27
VPS52-212ENST00000445902 IL18Q14116 193 aa13.38□□□□□ -0.27
VPS52-212ENST00000445902 LRRC32Q14392 662 aa13.38□□□□□ -0.27
VPS52-212ENST00000445902 IFI44LQ53G44 452 aa13.38□□□□□ -0.27
VPS52-212ENST00000445902 ANKRD54Q6NXT1 300 aa13.38□□□□□ -0.27
VPS52-212ENST00000445902 CD300LGQ6UXG3 332 aa13.38□□□□□ -0.27
VPS52-212ENST00000445902 CDH24Q86UP0 819 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms