RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 SLC2A2P11168 524 aaPredicted RBP15.31■□□□□ 0.04
PTPN13-204ENST00000436978 UMODL1-AS1Q8N2C9 162 aa15.31■□□□□ 0.04
PTPN13-204ENST00000436978 THEM6Q8WUY1 208 aa15.31■□□□□ 0.04
PTPN13-204ENST00000436978 ZNF623O75123 536 aa15.31■□□□□ 0.04
PTPN13-204ENST00000436978 PRH1P02810 166 aa15.31■□□□□ 0.04
PTPN13-204ENST00000436978 ITGA5P08648 1049 aa15.31■□□□□ 0.04
PTPN13-204ENST00000436978 VSX2P58304 361 aaPredicted RBP15.31■□□□□ 0.04
PTPN13-204ENST00000436978 SLC2A7Q6PXP3 512 aa15.31■□□□□ 0.04
PTPN13-204ENST00000436978 GHDCQ8N2G8 530 aa15.31■□□□□ 0.04
PTPN13-204ENST00000436978 LRCH3Q96II8 777 aa15.31■□□□□ 0.04
PTPN13-204ENST00000436978 WDR45Q9Y484 360 aa15.31■□□□□ 0.04
PTPN13-204ENST00000436978 MANEALQ5VSG8 457 aa15.3■□□□□ 0.04
PTPN13-204ENST00000436978 UNQ6126/PRO20091Q6UXV3 157 aa15.3■□□□□ 0.04
PTPN13-204ENST00000436978 NSUN3Q9H649 340 aaKnown RBP15.3■□□□□ 0.04
PTPN13-204ENST00000436978 POLR2CP19387 275 aaPredicted RBP15.3■□□□□ 0.04
PTPN13-204ENST00000436978 OR12D2P58182 307 aa15.3■□□□□ 0.04
PTPN13-204ENST00000436978 ZNF234Q14588 700 aa15.3■□□□□ 0.04
PTPN13-204ENST00000436978 SUSD1Q6UWL2 747 aa15.3■□□□□ 0.04
PTPN13-204ENST00000436978 DEFB119Q8N690 84 aa15.3■□□□□ 0.04
PTPN13-204ENST00000436978 DAZLQ92904 295 aaKnown RBP15.3■□□□□ 0.04
PTPN13-204ENST00000436978 DHRS1Q96LJ7 313 aa15.3■□□□□ 0.04
PTPN13-204ENST00000436978 A0A1W2PRQ8 180 aa15.3■□□□□ 0.04
PTPN13-204ENST00000436978 PVALBP20472 110 aaPredicted RBP15.3■□□□□ 0.04
PTPN13-204ENST00000436978 PRAMEF17Q5VTA0 474 aa15.3■□□□□ 0.04
PTPN13-204ENST00000436978 CTPS2Q9NRF8 586 aa15.3■□□□□ 0.04
PTPN13-204ENST00000436978 EURLQ9NYK6 297 aa15.3■□□□□ 0.04
PTPN13-204ENST00000436978 PCDHB14Q9Y5E9 798 aa15.3■□□□□ 0.04
PTPN13-204ENST00000436978 IRS2Q9Y4H2 1338 aa15.3■□□□□ 0.04
PTPN13-204ENST00000436978 NPIPA2E9PIF3 369 aa15.3■□□□□ 0.04
PTPN13-204ENST00000436978 NPIPA3F8WFD2 350 aa15.3■□□□□ 0.04
PTPN13-204ENST00000436978 CASP6P55212 293 aa15.3■□□□□ 0.04
PTPN13-204ENST00000436978 OGDHQ02218 1023 aa15.3■□□□□ 0.04
PTPN13-204ENST00000436978 C4orf46Q504U0 113 aa15.3■□□□□ 0.04
PTPN13-204ENST00000436978 ZNF615Q8N8J6 731 aa15.3■□□□□ 0.04
PTPN13-204ENST00000436978 H3BUI4 141 aa15.3■□□□□ 0.04
PTPN13-204ENST00000436978 LAMTOR5O43504 91 aa15.3■□□□□ 0.04
PTPN13-204ENST00000436978 FPR1P21462 350 aa15.3■□□□□ 0.04
PTPN13-204ENST00000436978 ZNF84P51523 738 aa15.3■□□□□ 0.04
PTPN13-204ENST00000436978 KCNC4Q03721 635 aa15.3■□□□□ 0.04
PTPN13-204ENST00000436978 FADDQ13158 208 aa15.3■□□□□ 0.04
PTPN13-204ENST00000436978 RAB39AQ14964 217 aa15.3■□□□□ 0.04
PTPN13-204ENST00000436978 KIAA1614Q5VZ46 1190 aa15.3■□□□□ 0.04
PTPN13-204ENST00000436978 ZNF852Q6ZMS4 543 aa15.3■□□□□ 0.04
PTPN13-204ENST00000436978 ZNF280BQ86YH2 543 aa15.3■□□□□ 0.04
PTPN13-204ENST00000436978 DLGAP4Q9Y2H0 992 aa15.3■□□□□ 0.04
PTPN13-204ENST00000436978 FARS2O95363 451 aaKnown RBP15.3■□□□□ 0.04
PTPN13-204ENST00000436978 SWT1Q5T5J6 900 aaKnown RBP15.3■□□□□ 0.04
PTPN13-204ENST00000436978 ZUFSPQ96AP4 578 aa15.3■□□□□ 0.04
PTPN13-204ENST00000436978 GPRC5BQ9NZH0 403 aa15.3■□□□□ 0.04
PTPN13-204ENST00000436978 ZNF638Q14966 1978 aaKnown RBP15.3■□□□□ 0.04
PTPN13-204ENST00000436978 TRPM3Q9HCF6 1732 aaPredicted RBP15.3■□□□□ 0.04
PTPN13-204ENST00000436978 A0A096LPI6 279 aa15.3■□□□□ 0.04
PTPN13-204ENST00000436978 BLOC1S5-TXNDC5H3BN57 136 aa15.3■□□□□ 0.04
PTPN13-204ENST00000436978 TIMP1P01033 207 aa15.3■□□□□ 0.04
PTPN13-204ENST00000436978 MT-ND5P03915 603 aa15.3■□□□□ 0.04
PTPN13-204ENST00000436978 S100A6P06703 90 aa15.3■□□□□ 0.04
PTPN13-204ENST00000436978 HBQ1P09105 142 aa15.3■□□□□ 0.04
PTPN13-204ENST00000436978 SCAPQ12770 1279 aa15.3■□□□□ 0.04
PTPN13-204ENST00000436978 TUBA3EQ6PEY2 450 aa15.3■□□□□ 0.04
PTPN13-204ENST00000436978 OR5P2Q8WZ92 322 aa15.3■□□□□ 0.04
PTPN13-204ENST00000436978 ZNF689Q96CS4 500 aaPredicted RBP15.3■□□□□ 0.04
PTPN13-204ENST00000436978 FRMD6Q96NE9 622 aa15.3■□□□□ 0.04
PTPN13-204ENST00000436978 GFM1Q96RP9 751 aaKnown RBP15.3■□□□□ 0.04
PTPN13-204ENST00000436978 PCYT2Q99447 389 aa15.3■□□□□ 0.04
PTPN13-204ENST00000436978 ZNF358Q9NW07 568 aa15.3■□□□□ 0.04
PTPN13-204ENST00000436978 FHP07954 510 aa15.29■□□□□ 0.04
PTPN13-204ENST00000436978 HOXD8P13378 290 aaPredicted RBP15.29■□□□□ 0.04
PTPN13-204ENST00000436978 DGKQP52824 942 aa15.29■□□□□ 0.04
PTPN13-204ENST00000436978 LASP1Q14847 261 aaKnown RBP15.29■□□□□ 0.04
PTPN13-204ENST00000436978 LIPT1Q9Y234 373 aa15.29■□□□□ 0.04
PTPN13-204ENST00000436978 ZNF840PA6NDX5 716 aa15.29■□□□□ 0.04
PTPN13-204ENST00000436978 CNTN5O94779 1100 aa15.29■□□□□ 0.04
PTPN13-204ENST00000436978 RAB15P59190 212 aa15.29■□□□□ 0.04
PTPN13-204ENST00000436978 TMEM198Q66K66 360 aa15.29■□□□□ 0.04
PTPN13-204ENST00000436978 DLK2Q6UY11 383 aa15.29■□□□□ 0.04
PTPN13-204ENST00000436978 MFSD2AQ8NA29 543 aa15.29■□□□□ 0.04
PTPN13-204ENST00000436978 ZFP3Q96NJ6 502 aa15.29■□□□□ 0.04
PTPN13-204ENST00000436978 TMED9Q9BVK6 235 aa15.29■□□□□ 0.04
PTPN13-204ENST00000436978 COMMD3Q9UBI1 195 aa15.29■□□□□ 0.04
PTPN13-204ENST00000436978 EXOSC1Q9Y3B2 195 aaKnown RBP15.29■□□□□ 0.04
PTPN13-204ENST00000436978 A0A1B0GVI7 797 aa15.29■□□□□ 0.04
PTPN13-204ENST00000436978 A0A1W2PP55 124 aa15.29■□□□□ 0.04
PTPN13-204ENST00000436978 HTR3EA5X5Y0 456 aa15.29■□□□□ 0.04
PTPN13-204ENST00000436978 C5orf51A6NDU8 294 aa15.29■□□□□ 0.04
PTPN13-204ENST00000436978 TTLL8A6PVC2 850 aa15.29■□□□□ 0.04
PTPN13-204ENST00000436978 HEPACAM2A8MVW5 462 aa15.29■□□□□ 0.04
PTPN13-204ENST00000436978 CLDN19Q8N6F1 224 aa15.29■□□□□ 0.04
PTPN13-204ENST00000436978 GMLQ99445 158 aa15.29■□□□□ 0.04
PTPN13-204ENST00000436978 MOV10Q9HCE1 1003 aaKnown RBP15.29■□□□□ 0.04
PTPN13-204ENST00000436978 PRKD3O94806 890 aa15.29■□□□□ 0.04
PTPN13-204ENST00000436978 IFNA21P01568 189 aa15.29■□□□□ 0.04
PTPN13-204ENST00000436978 RTL10Q7L3V2 364 aa15.29■□□□□ 0.04
PTPN13-204ENST00000436978 TRNAU1APQ9NX07 287 aaKnown RBP15.29■□□□□ 0.04
PTPN13-204ENST00000436978 ASGR2P07307 311 aa15.29■□□□□ 0.04
PTPN13-204ENST00000436978 CSF2RAP15509 400 aa15.29■□□□□ 0.04
PTPN13-204ENST00000436978 MEDAGQ5VYS4 303 aa15.29■□□□□ 0.04
PTPN13-204ENST00000436978 OGFOD2Q6N063 350 aa15.29■□□□□ 0.04
PTPN13-204ENST00000436978 TICAM1Q8IUC6 712 aa15.29■□□□□ 0.04
PTPN13-204ENST00000436978 ZNF440Q8IYI8 595 aa15.29■□□□□ 0.04
PTPN13-204ENST00000436978 TRIB2Q92519 343 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms