RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 ATG2BQ96BY7 2078 aa13.33□□□□□ -0.28
HOXC4-202ENST00000430889 PRAMEF25A6NGN4 478 aa13.33□□□□□ -0.28
HOXC4-202ENST00000430889 M0QX08 132 aa13.33□□□□□ -0.28
HOXC4-202ENST00000430889 SLC1A7O00341 560 aa13.33□□□□□ -0.28
HOXC4-202ENST00000430889 BCKDKO14874 412 aa13.33□□□□□ -0.28
HOXC4-202ENST00000430889 SUV39H1O43463 412 aa13.33□□□□□ -0.28
HOXC4-202ENST00000430889 UGT2B11O75310 529 aa13.33□□□□□ -0.28
HOXC4-202ENST00000430889 ARAFP10398 606 aa13.33□□□□□ -0.28
HOXC4-202ENST00000430889 AGXTP21549 392 aa13.33□□□□□ -0.28
HOXC4-202ENST00000430889 GDI1P31150 447 aa13.33□□□□□ -0.28
HOXC4-202ENST00000430889 FRKP42685 505 aaPredicted RBP13.33□□□□□ -0.28
HOXC4-202ENST00000430889 CCR8P51685 355 aa13.33□□□□□ -0.28
HOXC4-202ENST00000430889 CLCNKAP51800 687 aa13.33□□□□□ -0.28
HOXC4-202ENST00000430889 SELENOWP63302 87 aa13.33□□□□□ -0.28
HOXC4-202ENST00000430889 RAPSNQ13702 412 aa13.33□□□□□ -0.28
HOXC4-202ENST00000430889 LAPTM4AQ15012 233 aa13.33□□□□□ -0.28
HOXC4-202ENST00000430889 ZNF776Q68DI1 518 aaPredicted RBP13.33□□□□□ -0.28
HOXC4-202ENST00000430889 CACUL1Q86Y37 369 aa13.33□□□□□ -0.28
HOXC4-202ENST00000430889 SPARTQ8N0X7 666 aa13.33□□□□□ -0.28
HOXC4-202ENST00000430889 TAMM41Q96BW9 452 aa13.33□□□□□ -0.28
HOXC4-202ENST00000430889 TM4SF18Q96CE8 201 aa13.33□□□□□ -0.28
HOXC4-202ENST00000430889 INSM2Q96T92 566 aaPredicted RBP13.33□□□□□ -0.28
HOXC4-202ENST00000430889 PITX2Q99697 317 aa13.33□□□□□ -0.28
HOXC4-202ENST00000430889 ACAT2Q9BWD1 397 aa13.33□□□□□ -0.28
HOXC4-202ENST00000430889 SLAMF7Q9NQ25 335 aa13.33□□□□□ -0.28
HOXC4-202ENST00000430889 PAK1IP1Q9NWT1 392 aaPredicted RBP13.33□□□□□ -0.28
HOXC4-202ENST00000430889 ADPRHL2Q9NX46 363 aa13.33□□□□□ -0.28
HOXC4-202ENST00000430889 TMEM9Q9P0T7 183 aa13.33□□□□□ -0.28
HOXC4-202ENST00000430889 RAPGEFL1Q9UHV5 662 aa13.33□□□□□ -0.28
HOXC4-202ENST00000430889 ACSL6Q9UKU0 697 aa13.33□□□□□ -0.28
HOXC4-202ENST00000430889 NDRG4Q9ULP0 352 aaKnown RBP13.33□□□□□ -0.28
HOXC4-202ENST00000430889 SLC17A4Q9Y2C5 497 aa13.33□□□□□ -0.28
HOXC4-202ENST00000430889 HSPE1-MOB4S4R3N1 261 aa13.33□□□□□ -0.28
HOXC4-202ENST00000430889 SNRNP200O75643 2136 aaKnown RBP13.33□□□□□ -0.28
HOXC4-202ENST00000430889 IGKV1-8A0A0C4DH67 115 aa13.32□□□□□ -0.28
HOXC4-202ENST00000430889 A0A1W2PRB8 838 aa13.32□□□□□ -0.28
HOXC4-202ENST00000430889 PLRG1O43660 514 aaKnown RBP13.32□□□□□ -0.28
HOXC4-202ENST00000430889 C9P02748 559 aa13.32□□□□□ -0.28
HOXC4-202ENST00000430889 CEACAM5P06731 702 aa13.32□□□□□ -0.28
HOXC4-202ENST00000430889 CCDC159P0C7I6 412 aa13.32□□□□□ -0.28
HOXC4-202ENST00000430889 SLC35G4P0C7Q5 338 aa13.32□□□□□ -0.28
HOXC4-202ENST00000430889 LAMP2P13473 410 aa13.32□□□□□ -0.28
HOXC4-202ENST00000430889 DDCP20711 480 aa13.32□□□□□ -0.28
HOXC4-202ENST00000430889 CXCR2P25025 360 aa13.32□□□□□ -0.28
HOXC4-202ENST00000430889 SOX9P48436 509 aa13.32□□□□□ -0.28
HOXC4-202ENST00000430889 GALK1P51570 392 aa13.32□□□□□ -0.28
HOXC4-202ENST00000430889 CDK5R2Q13319 367 aa13.32□□□□□ -0.28
HOXC4-202ENST00000430889 SLC5A12Q1EHB4 618 aa13.32□□□□□ -0.28
HOXC4-202ENST00000430889 CRB2Q5IJ48 1285 aa13.32□□□□□ -0.28
HOXC4-202ENST00000430889 LAIR1Q6GTX8 287 aa13.32□□□□□ -0.28
HOXC4-202ENST00000430889 KIAA1211LQ6NV74 962 aa13.32□□□□□ -0.28
HOXC4-202ENST00000430889 UBE3DQ7Z6J8 389 aa13.32□□□□□ -0.28
HOXC4-202ENST00000430889 MRPL38Q96DV4 380 aaKnown RBP13.32□□□□□ -0.28
HOXC4-202ENST00000430889 GABRG3Q99928 467 aa13.32□□□□□ -0.28
HOXC4-202ENST00000430889 SH3GL3Q99963 347 aa13.32□□□□□ -0.28
HOXC4-202ENST00000430889 MCOLN1Q9GZU1 580 aa13.32□□□□□ -0.28
HOXC4-202ENST00000430889 AICDAQ9GZX7 198 aa13.32□□□□□ -0.28
HOXC4-202ENST00000430889 BTBD1Q9H0C5 482 aa13.32□□□□□ -0.28
HOXC4-202ENST00000430889 RMI1Q9H9A7 625 aa13.32□□□□□ -0.28
HOXC4-202ENST00000430889 TIMMDC1Q9NPL8 285 aa13.32□□□□□ -0.28
HOXC4-202ENST00000430889 PHPT1Q9NRX4 125 aaPredicted RBP13.32□□□□□ -0.28
HOXC4-202ENST00000430889 THUMPD1Q9NXG2 353 aaKnown RBP13.32□□□□□ -0.28
HOXC4-202ENST00000430889 AHSPQ9NZD4 102 aa13.32□□□□□ -0.28
HOXC4-202ENST00000430889 NDUFAF4Q9P032 175 aa13.32□□□□□ -0.28
HOXC4-202ENST00000430889 PDP1Q9P0J1 537 aaPredicted RBP13.32□□□□□ -0.28
HOXC4-202ENST00000430889 SAMHD1Q9Y3Z3 626 aaKnown RBP13.32□□□□□ -0.28
HOXC4-202ENST00000430889 ORC6Q9Y5N6 252 aa13.32□□□□□ -0.28
HOXC4-202ENST00000430889 H3BMQ9 156 aa13.31□□□□□ -0.28
HOXC4-202ENST00000430889 ATE1O95260 518 aa13.31□□□□□ -0.28
HOXC4-202ENST00000430889 FKBP9O95302 570 aa13.31□□□□□ -0.28
HOXC4-202ENST00000430889 PAK4O96013 591 aaPredicted RBP13.31□□□□□ -0.28
HOXC4-202ENST00000430889 JUNDP17535 347 aa13.31□□□□□ -0.28
HOXC4-202ENST00000430889 PCMT1P22061 227 aa13.31□□□□□ -0.28
HOXC4-202ENST00000430889 PKLRP30613 574 aa13.31□□□□□ -0.28
HOXC4-202ENST00000430889 IGFALSP35858 605 aa13.31□□□□□ -0.28
HOXC4-202ENST00000430889 CRATP43155 626 aa13.31□□□□□ -0.28
HOXC4-202ENST00000430889 RPS21P63220 83 aaKnown RBP13.31□□□□□ -0.28
HOXC4-202ENST00000430889 CSNK1G2P78368 415 aa13.31□□□□□ -0.28
HOXC4-202ENST00000430889 TUBA3CQ13748 450 aa13.31□□□□□ -0.28
HOXC4-202ENST00000430889 SCARB2Q14108 478 aa13.31□□□□□ -0.28
HOXC4-202ENST00000430889 NEDD8Q15843 81 aa13.31□□□□□ -0.28
HOXC4-202ENST00000430889 ZNF630Q2M218 657 aaPredicted RBP13.31□□□□□ -0.28
HOXC4-202ENST00000430889 NUDT18Q6ZVK8 323 aa13.31□□□□□ -0.28
HOXC4-202ENST00000430889 HORMAD1Q86X24 394 aa13.31□□□□□ -0.28
HOXC4-202ENST00000430889 OR4C15Q8NGM1 316 aa13.31□□□□□ -0.28
HOXC4-202ENST00000430889 SCARF2Q96GP6 870 aaPredicted RBP13.31□□□□□ -0.28
HOXC4-202ENST00000430889 COG8Q96MW5 612 aa13.31□□□□□ -0.28
HOXC4-202ENST00000430889 F2RL3Q96RI0 385 aa13.31□□□□□ -0.28
HOXC4-202ENST00000430889 TMEM121BQ9BXQ6 578 aaPredicted RBP13.31□□□□□ -0.28
HOXC4-202ENST00000430889 MKRN2Q9H000 416 aaKnown RBP13.31□□□□□ -0.28
HOXC4-202ENST00000430889 S1PR5Q9H228 398 aa13.31□□□□□ -0.28
HOXC4-202ENST00000430889 RAD21L1Q9H4I0 556 aa13.31□□□□□ -0.28
HOXC4-202ENST00000430889 CXorf36Q9H7Y0 433 aa13.31□□□□□ -0.28
HOXC4-202ENST00000430889 FANCEQ9HB96 536 aa13.31□□□□□ -0.28
HOXC4-202ENST00000430889 THSD1Q9NS62 852 aa13.31□□□□□ -0.28
HOXC4-202ENST00000430889 SPASTQ9UBP0 616 aa13.31□□□□□ -0.28
HOXC4-202ENST00000430889 ADAM29Q9UKF5 820 aa13.31□□□□□ -0.28
HOXC4-202ENST00000430889 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.31□□□□□ -0.28
HOXC4-202ENST00000430889 ANKDD1BA6NHY2 528 aa13.31□□□□□ -0.28
HOXC4-202ENST00000430889 MYO1GB0I1T2 1018 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms