RNA–Protein interactions for RNA: ENST00000429856.1

HMGB1P9-201, Transcript of high mobility group box 1 pseudogene 9, humanhuman

BASIC

Gene HMGB1P9, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P9-201ENST00000429856 CALCAP01258 141 aa2.65□□□□□ -1.99
HMGB1P9-201ENST00000429856 MMP10P09238 476 aa2.65□□□□□ -1.99
HMGB1P9-201ENST00000429856 KRT13P13646 458 aa2.65□□□□□ -1.99
HMGB1P9-201ENST00000429856 CPA3P15088 417 aa2.65□□□□□ -1.99
HMGB1P9-201ENST00000429856 RPS2P15880 293 aaKnown RBP2.65□□□□□ -1.99
HMGB1P9-201ENST00000429856 EPHA2P29317 976 aa2.65□□□□□ -1.99
HMGB1P9-201ENST00000429856 TIMP3P35625 211 aa2.65□□□□□ -1.99
HMGB1P9-201ENST00000429856 PRPHP41219 470 aa2.65□□□□□ -1.99
HMGB1P9-201ENST00000429856 IFNAR2P48551 515 aa2.65□□□□□ -1.99
HMGB1P9-201ENST00000429856 CDH11P55287 796 aa2.65□□□□□ -1.99
HMGB1P9-201ENST00000429856 RPS18P62269 152 aaKnown RBP2.65□□□□□ -1.99
HMGB1P9-201ENST00000429856 SLC34A1Q06495 639 aa2.65□□□□□ -1.99
HMGB1P9-201ENST00000429856 FUT7Q11130 342 aa2.65□□□□□ -1.99
HMGB1P9-201ENST00000429856 ABRQ12979 859 aa2.65□□□□□ -1.99
HMGB1P9-201ENST00000429856 CDH18Q13634 790 aa2.65□□□□□ -1.99
HMGB1P9-201ENST00000429856 RAPSNQ13702 412 aa2.65□□□□□ -1.99
HMGB1P9-201ENST00000429856 DPYSQ14117 519 aa2.65□□□□□ -1.99
HMGB1P9-201ENST00000429856 RFTN1Q14699 578 aaPredicted RBP2.65□□□□□ -1.99
HMGB1P9-201ENST00000429856 KRT31Q15323 416 aa2.65□□□□□ -1.99
HMGB1P9-201ENST00000429856 PHKG1Q16816 387 aa2.65□□□□□ -1.99
HMGB1P9-201ENST00000429856 HSP90AA5PQ58FG0 334 aa2.65□□□□□ -1.99
HMGB1P9-201ENST00000429856 SLC35E4Q6ICL7 350 aa2.65□□□□□ -1.99
HMGB1P9-201ENST00000429856 SULT1C3Q6IMI6 304 aa2.65□□□□□ -1.99
HMGB1P9-201ENST00000429856 CTR9Q6PD62 1173 aa2.65□□□□□ -1.99
HMGB1P9-201ENST00000429856 PSRC1Q6PGN9 363 aaPredicted RBP2.65□□□□□ -1.99
HMGB1P9-201ENST00000429856 TMEM26Q6ZUK4 368 aa2.65□□□□□ -1.99
HMGB1P9-201ENST00000429856 CPEB2Q7Z5Q1 589 aaKnown RBP2.65□□□□□ -1.99
HMGB1P9-201ENST00000429856 GPALPP1Q8IXQ4 340 aa2.65□□□□□ -1.99
HMGB1P9-201ENST00000429856 DNAJC22Q8N4W6 341 aa2.65□□□□□ -1.99
HMGB1P9-201ENST00000429856 KLHDC9Q8NEP7 349 aa2.65□□□□□ -1.99
HMGB1P9-201ENST00000429856 KBTBD8Q8NFY9 601 aa2.65□□□□□ -1.99
HMGB1P9-201ENST00000429856 HSD17B8Q92506 261 aa2.65□□□□□ -1.99
HMGB1P9-201ENST00000429856 TM9SF4Q92544 642 aa2.65□□□□□ -1.99
HMGB1P9-201ENST00000429856 LGALS12Q96DT0 336 aa2.65□□□□□ -1.99
HMGB1P9-201ENST00000429856 PGM2Q96G03 612 aa2.65□□□□□ -1.99
HMGB1P9-201ENST00000429856 THUMPD2Q9BTF0 503 aaKnown RBP2.65□□□□□ -1.99
HMGB1P9-201ENST00000429856 RAB17Q9H0T7 212 aa2.65□□□□□ -1.99
HMGB1P9-201ENST00000429856 ZDHHC6Q9H6R6 413 aa2.65□□□□□ -1.99
HMGB1P9-201ENST00000429856 ECT2Q9H8V3 914 aa2.65□□□□□ -1.99
HMGB1P9-201ENST00000429856 APOBEC3GQ9HC16 384 aaKnown RBP2.65□□□□□ -1.99
HMGB1P9-201ENST00000429856 PALMDQ9NP74 551 aa2.65□□□□□ -1.99
HMGB1P9-201ENST00000429856 FAM207AQ9NSI2 230 aaPredicted RBP2.65□□□□□ -1.99
HMGB1P9-201ENST00000429856 CNOT2Q9NZN8 540 aaKnown RBP2.65□□□□□ -1.99
HMGB1P9-201ENST00000429856 TMOD2Q9NZR1 351 aa2.65□□□□□ -1.99
HMGB1P9-201ENST00000429856 ZNF624Q9P2J8 865 aaPredicted RBP2.65□□□□□ -1.99
HMGB1P9-201ENST00000429856 RABL2AQ9UBK7 228 aaPredicted RBP2.65□□□□□ -1.99
HMGB1P9-201ENST00000429856 CHRNA9Q9UGM1 479 aa2.65□□□□□ -1.99
HMGB1P9-201ENST00000429856 ZDHHC2Q9UIJ5 367 aa2.65□□□□□ -1.99
HMGB1P9-201ENST00000429856 LAMP5Q9UJQ1 280 aa2.65□□□□□ -1.99
HMGB1P9-201ENST00000429856 KCNJ14Q9UNX9 436 aa2.65□□□□□ -1.99
HMGB1P9-201ENST00000429856 ATG4BQ9Y4P1 393 aa2.65□□□□□ -1.99
HMGB1P9-201ENST00000429856 UBE4BO95155 1302 aa2.65□□□□□ -1.99
HMGB1P9-201ENST00000429856 SYNRGQ9UMZ2 1314 aa2.65□□□□□ -1.99
HMGB1P9-201ENST00000429856 KDRP35968 1356 aa2.64□□□□□ -1.99
HMGB1P9-201ENST00000429856 ARID2Q68CP9 1835 aa2.64□□□□□ -1.99
HMGB1P9-201ENST00000429856 TRAV18A0A075B6X5 111 aa2.64□□□□□ -1.99
HMGB1P9-201ENST00000429856 TRBV5-5A0A0J9YX44 114 aa2.64□□□□□ -1.99
HMGB1P9-201ENST00000429856 A0A0U1RQV5 110 aa2.64□□□□□ -1.99
HMGB1P9-201ENST00000429856 LOC101059948A0A1B0GTJ6 334 aa2.64□□□□□ -1.99
HMGB1P9-201ENST00000429856 CCDC162PA2VCL2 907 aa2.64□□□□□ -1.99
HMGB1P9-201ENST00000429856 ZSCAN5CA6NGD5 496 aaPredicted RBP2.64□□□□□ -1.99
HMGB1P9-201ENST00000429856 GLTPD2A6NH11 291 aa2.64□□□□□ -1.99
HMGB1P9-201ENST00000429856 PMS2P5A8MQ11 134 aa2.64□□□□□ -1.99
HMGB1P9-201ENST00000429856 C2CD4DB7Z1M9 353 aa2.64□□□□□ -1.99
HMGB1P9-201ENST00000429856 NPIPA3F8WFD2 350 aa2.64□□□□□ -1.99
HMGB1P9-201ENST00000429856 CHADO15335 359 aa2.64□□□□□ -1.99
HMGB1P9-201ENST00000429856 RIPK2O43353 540 aa2.64□□□□□ -1.99
HMGB1P9-201ENST00000429856 PCDH7O60245 1069 aa2.64□□□□□ -1.99
HMGB1P9-201ENST00000429856 SCGB2A1O75556 95 aa2.64□□□□□ -1.99
HMGB1P9-201ENST00000429856 SNX4O95219 450 aa2.64□□□□□ -1.99
HMGB1P9-201ENST00000429856 APOHP02749 345 aaPredicted RBP2.64□□□□□ -1.99
HMGB1P9-201ENST00000429856 ODC1P11926 461 aa2.64□□□□□ -1.99
HMGB1P9-201ENST00000429856 EZRP15311 586 aaKnown RBP2.64□□□□□ -1.99
HMGB1P9-201ENST00000429856 CYP11B1P15538 503 aa2.64□□□□□ -1.99
HMGB1P9-201ENST00000429856 ARF4P18085 180 aaPredicted RBP2.64□□□□□ -1.99
HMGB1P9-201ENST00000429856 MSH3P20585 1137 aa2.64□□□□□ -1.99
HMGB1P9-201ENST00000429856 CDH3P22223 829 aa2.64□□□□□ -1.99
HMGB1P9-201ENST00000429856 LHCGRP22888 699 aa2.64□□□□□ -1.99
HMGB1P9-201ENST00000429856 PAX7P23759 505 aa2.64□□□□□ -1.99
HMGB1P9-201ENST00000429856 MARCKSP29966 332 aaPredicted RBP2.64□□□□□ -1.99
HMGB1P9-201ENST00000429856 PBLDP30039 288 aaPredicted RBP2.64□□□□□ -1.99
HMGB1P9-201ENST00000429856 DCTP40126 519 aa2.64□□□□□ -1.99
HMGB1P9-201ENST00000429856 PEX19P40855 299 aa2.64□□□□□ -1.99
HMGB1P9-201ENST00000429856 ASMTP46597 345 aa2.64□□□□□ -1.99
HMGB1P9-201ENST00000429856 GLIPR1P48060 266 aa2.64□□□□□ -1.99
HMGB1P9-201ENST00000429856 SLC6A12P48065 614 aa2.64□□□□□ -1.99
HMGB1P9-201ENST00000429856 TRPC1P48995 793 aa2.64□□□□□ -1.99
HMGB1P9-201ENST00000429856 CCL11P51671 97 aa2.64□□□□□ -1.99
HMGB1P9-201ENST00000429856 NR0B1P51843 470 aaKnown RBP2.64□□□□□ -1.99
HMGB1P9-201ENST00000429856 METAP1P53582 386 aa2.64□□□□□ -1.99
HMGB1P9-201ENST00000429856 NLRP11P59045 1033 aaKnown RBP2.64□□□□□ -1.99
HMGB1P9-201ENST00000429856 OVGP1Q12889 678 aa2.64□□□□□ -1.99
HMGB1P9-201ENST00000429856 TRAP1Q12931 704 aaKnown RBP2.64□□□□□ -1.99
HMGB1P9-201ENST00000429856 TSTA3Q13630 321 aaPredicted RBP2.64□□□□□ -1.99
HMGB1P9-201ENST00000429856 RBM39Q14498 530 aaKnown RBP2.64□□□□□ -1.99
HMGB1P9-201ENST00000429856 ZKSCAN8Q15776 578 aaPredicted RBP2.64□□□□□ -1.99
HMGB1P9-201ENST00000429856 EXT1Q16394 746 aa2.64□□□□□ -1.99
HMGB1P9-201ENST00000429856 HERC4Q5GLZ8 1057 aaPredicted RBP2.64□□□□□ -1.99
HMGB1P9-201ENST00000429856 FUT10Q6P4F1 479 aa2.64□□□□□ -1.99
HMGB1P9-201ENST00000429856 RGS9BPQ6ZS82 235 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms