RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 TRAPPC9Q96Q05 1148 aa14.92□□□□□ -0.02
SHOX2-202ENST00000425436 SH3GL1Q99961 368 aa14.92□□□□□ -0.02
SHOX2-202ENST00000425436 EFHD1Q9BUP0 239 aa14.92□□□□□ -0.02
SHOX2-202ENST00000425436 ACPTQ9BZG2 426 aa14.92□□□□□ -0.02
SHOX2-202ENST00000425436 EHD1Q9H4M9 534 aa14.92□□□□□ -0.02
SHOX2-202ENST00000425436 ZNF768Q9H5H4 540 aaKnown RBP14.92□□□□□ -0.02
SHOX2-202ENST00000425436 INTS7Q9NVH2 962 aaKnown RBP14.92□□□□□ -0.02
SHOX2-202ENST00000425436 NMRK1Q9NWW6 199 aa14.92□□□□□ -0.02
SHOX2-202ENST00000425436 DYRK1BQ9Y463 629 aa14.92□□□□□ -0.02
SHOX2-202ENST00000425436 LOXL2Q9Y4K0 774 aa14.92□□□□□ -0.02
SHOX2-202ENST00000425436 POLR3HQ9Y535 204 aaPredicted RBP14.92□□□□□ -0.02
SHOX2-202ENST00000425436 PCDHB11Q9Y5F2 797 aa14.92□□□□□ -0.02
SHOX2-202ENST00000425436 CACNA1AO00555 2505 aa14.91□□□□□ -0.02
SHOX2-202ENST00000425436 A0A0J9YY10 115 aa14.91□□□□□ -0.02
SHOX2-202ENST00000425436 PRORSD1PA6NEY8 169 aa14.91□□□□□ -0.02
SHOX2-202ENST00000425436 EFCAB7A8K855 629 aa14.91□□□□□ -0.02
SHOX2-202ENST00000425436 TOX3O15405 576 aaPredicted RBP14.91□□□□□ -0.02
SHOX2-202ENST00000425436 PEX1O43933 1283 aa14.91□□□□□ -0.02
SHOX2-202ENST00000425436 ACADSP16219 412 aa14.91□□□□□ -0.02
SHOX2-202ENST00000425436 ITIH1P19827 911 aa14.91□□□□□ -0.02
SHOX2-202ENST00000425436 MAGP20916 626 aa14.91□□□□□ -0.02
SHOX2-202ENST00000425436 SLC6A2P23975 617 aa14.91□□□□□ -0.02
SHOX2-202ENST00000425436 ARL4DP49703 201 aa14.91□□□□□ -0.02
SHOX2-202ENST00000425436 EEFSECP57772 596 aaKnown RBP14.91□□□□□ -0.02
SHOX2-202ENST00000425436 HMGCS1Q01581 520 aa14.91□□□□□ -0.02
SHOX2-202ENST00000425436 CAMK2BQ13554 666 aa14.91□□□□□ -0.02
SHOX2-202ENST00000425436 LAPTM5Q13571 262 aa14.91□□□□□ -0.02
SHOX2-202ENST00000425436 KIAA0040Q15053 153 aa14.91□□□□□ -0.02
SHOX2-202ENST00000425436 ZIC1Q15915 447 aa14.91□□□□□ -0.02
SHOX2-202ENST00000425436 HIST2H2ACQ16777 129 aaPredicted RBP14.91□□□□□ -0.02
SHOX2-202ENST00000425436 PAGE2BQ5JRK9 111 aa14.91□□□□□ -0.02
SHOX2-202ENST00000425436 HIST2H2AA3Q6FI13 130 aa14.91□□□□□ -0.02
SHOX2-202ENST00000425436 DHFR2Q86XF0 187 aa14.91□□□□□ -0.02
SHOX2-202ENST00000425436 SLC15A3Q8IY34 581 aa14.91□□□□□ -0.02
SHOX2-202ENST00000425436 AGBL5Q8NDL9 886 aa14.91□□□□□ -0.02
SHOX2-202ENST00000425436 HIPK4Q8NE63 616 aa14.91□□□□□ -0.02
SHOX2-202ENST00000425436 CATSPER1Q8NEC5 780 aa14.91□□□□□ -0.02
SHOX2-202ENST00000425436 OR2L3Q8NG85 312 aa14.91□□□□□ -0.02
SHOX2-202ENST00000425436 LIN37Q96GY3 246 aaPredicted RBP14.91□□□□□ -0.02
SHOX2-202ENST00000425436 TEX37Q96LM6 180 aa14.91□□□□□ -0.02
SHOX2-202ENST00000425436 CMKLR1Q99788 373 aa14.91□□□□□ -0.02
SHOX2-202ENST00000425436 CCDC177Q9NQR7 707 aaPredicted RBP14.91□□□□□ -0.02
SHOX2-202ENST00000425436 FARSBQ9NSD9 589 aaKnown RBP14.91□□□□□ -0.02
SHOX2-202ENST00000425436 SOHLH2Q9NX45 425 aa14.91□□□□□ -0.02
SHOX2-202ENST00000425436 SH2B3Q9UQQ2 575 aa14.91□□□□□ -0.02
SHOX2-202ENST00000425436 CCDC187A0A096LP49 1063 aa14.9□□□□□ -0.02
SHOX2-202ENST00000425436 CASQ2O14958 399 aaPredicted RBP14.9□□□□□ -0.02
SHOX2-202ENST00000425436 PRMT3O60678 531 aa14.9□□□□□ -0.02
SHOX2-202ENST00000425436 MYO1DO94832 1006 aa14.9□□□□□ -0.02
SHOX2-202ENST00000425436 ZBTB11O95625 1053 aaPredicted RBP14.9□□□□□ -0.02
SHOX2-202ENST00000425436 C8BP07358 591 aa14.9□□□□□ -0.02
SHOX2-202ENST00000425436 ANKRD34CP0C6C1 535 aa14.9□□□□□ -0.02
SHOX2-202ENST00000425436 NPPBP16860 134 aa14.9□□□□□ -0.02
SHOX2-202ENST00000425436 NELFEP18615 380 aaKnown RBP14.9□□□□□ -0.02
SHOX2-202ENST00000425436 ATP6V1C1P21283 382 aa14.9□□□□□ -0.02
SHOX2-202ENST00000425436 IL12AP29459 219 aa14.9□□□□□ -0.02
SHOX2-202ENST00000425436 ETV5P41161 510 aa14.9□□□□□ -0.02
SHOX2-202ENST00000425436 GRIA3P42263 894 aa14.9□□□□□ -0.02
SHOX2-202ENST00000425436 CLDN8P56748 225 aa14.9□□□□□ -0.02
SHOX2-202ENST00000425436 RHDQ02161 417 aa14.9□□□□□ -0.02
SHOX2-202ENST00000425436 PWP1Q13610 501 aa14.9□□□□□ -0.02
SHOX2-202ENST00000425436 DOC2AQ14183 400 aa14.9□□□□□ -0.02
SHOX2-202ENST00000425436 FAM219BQ5XKK7 198 aa14.9□□□□□ -0.02
SHOX2-202ENST00000425436 MSANTD1Q6ZTZ1 278 aa14.9□□□□□ -0.02
SHOX2-202ENST00000425436 SPATA24Q86W54 205 aa14.9□□□□□ -0.02
SHOX2-202ENST00000425436 LIX1Q8N485 282 aa14.9□□□□□ -0.02
SHOX2-202ENST00000425436 RNF148Q8N7C7 305 aa14.9□□□□□ -0.02
SHOX2-202ENST00000425436 WDR36Q8NI36 951 aaKnown RBP14.9□□□□□ -0.02
SHOX2-202ENST00000425436 STARD8Q92502 1023 aa14.9□□□□□ -0.02
SHOX2-202ENST00000425436 UBE2E3Q969T4 207 aa14.9□□□□□ -0.02
SHOX2-202ENST00000425436 VPS33AQ96AX1 596 aa14.9□□□□□ -0.02
SHOX2-202ENST00000425436 WDR34Q96EX3 536 aa14.9□□□□□ -0.02
SHOX2-202ENST00000425436 NAF1Q96HR8 494 aaKnown RBP14.9□□□□□ -0.02
SHOX2-202ENST00000425436 OR4K3Q96R72 315 aa14.9□□□□□ -0.02
SHOX2-202ENST00000425436 HBEGFQ99075 208 aa14.9□□□□□ -0.02
SHOX2-202ENST00000425436 EFCAB11Q9BUY7 163 aa14.9□□□□□ -0.02
SHOX2-202ENST00000425436 SGPP1Q9BX95 441 aa14.9□□□□□ -0.02
SHOX2-202ENST00000425436 FAM60AQ9NP50 221 aa14.9□□□□□ -0.02
SHOX2-202ENST00000425436 MRPS30Q9NP92 439 aaKnown RBP14.9□□□□□ -0.02
SHOX2-202ENST00000425436 AKAP7Q9P0M2 348 aaPredicted RBP14.9□□□□□ -0.02
SHOX2-202ENST00000425436 SEMA5BQ9P283 1151 aa14.9□□□□□ -0.02
SHOX2-202ENST00000425436 VPS29Q9UBQ0 182 aa14.9□□□□□ -0.02
SHOX2-202ENST00000425436 PISDQ9UG56 409 aa14.9□□□□□ -0.02
SHOX2-202ENST00000425436 PCDHA9Q9Y5H5 950 aa14.9□□□□□ -0.02
SHOX2-202ENST00000425436 ASPMQ8IZT6 3477 aa14.89□□□□□ -0.03
SHOX2-202ENST00000425436 HEATR5BQ9P2D3 2071 aa14.89□□□□□ -0.03
SHOX2-202ENST00000425436 ADAMTS20P59510 1910 aa14.89□□□□□ -0.03
SHOX2-202ENST00000425436 TRABD2BA6NFA1 517 aa14.89□□□□□ -0.03
SHOX2-202ENST00000425436 AQP12BA6NM10 295 aa14.89□□□□□ -0.03
SHOX2-202ENST00000425436 FXYD1O00168 92 aa14.89□□□□□ -0.03
SHOX2-202ENST00000425436 KCNH1O95259 989 aa14.89□□□□□ -0.03
SHOX2-202ENST00000425436 BCKDHAP12694 445 aa14.89□□□□□ -0.03
SHOX2-202ENST00000425436 FOLR1P15328 257 aa14.89□□□□□ -0.03
SHOX2-202ENST00000425436 TCN1P20061 433 aaPredicted RBP14.89□□□□□ -0.03
SHOX2-202ENST00000425436 CMPK1P30085 196 aa14.89□□□□□ -0.03
SHOX2-202ENST00000425436 MAPK10P53779 464 aa14.89□□□□□ -0.03
SHOX2-202ENST00000425436 HSD11B2P80365 405 aa14.89□□□□□ -0.03
SHOX2-202ENST00000425436 PRDX1Q06830 199 aaKnown RBP14.89□□□□□ -0.03
SHOX2-202ENST00000425436 MAP7Q14244 749 aa14.89□□□□□ -0.03
SHOX2-202ENST00000425436 DPY19L1Q2PZI1 675 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms